RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 SURF6O75683 361 aaKnown RBP18.31■□□□□ 0.52
LIMS4-201ENST00000413601 OS9Q13438 667 aaPredicted RBP18.31■□□□□ 0.52
LIMS4-201ENST00000413601 CEP85Q6P2H3 762 aa18.31■□□□□ 0.52
LIMS4-201ENST00000413601 MOB2Q70IA6 237 aa18.31■□□□□ 0.52
LIMS4-201ENST00000413601 DEFB129Q9H1M3 183 aa18.31■□□□□ 0.52
LIMS4-201ENST00000413601 TDRD3Q9H7E2 651 aaKnown RBP18.31■□□□□ 0.52
LIMS4-201ENST00000413601 DENND2AQ9ULE3 1009 aa18.31■□□□□ 0.52
LIMS4-201ENST00000413601 SEMA3EO15041 775 aa18.3■□□□□ 0.52
LIMS4-201ENST00000413601 NF2P35240 595 aa18.3■□□□□ 0.52
LIMS4-201ENST00000413601 HDLBPQ00341 1268 aaKnown RBP18.3■□□□□ 0.52
LIMS4-201ENST00000413601 SPDYE2Q495Y8 402 aa18.3■□□□□ 0.52
LIMS4-201ENST00000413601 C20orf194Q5TEA3 1177 aa18.3■□□□□ 0.52
LIMS4-201ENST00000413601 RGMBQ6NW40 437 aa18.3■□□□□ 0.52
LIMS4-201ENST00000413601 TEKT1Q969V4 418 aa18.3■□□□□ 0.52
LIMS4-201ENST00000413601 ZNF70Q9UC06 446 aaPredicted RBP18.3■□□□□ 0.52
LIMS4-201ENST00000413601 DDX19BQ9UMR2 479 aa18.3■□□□□ 0.52
LIMS4-201ENST00000413601 SUGT1Q9Y2Z0 365 aa18.3■□□□□ 0.52
LIMS4-201ENST00000413601 MAST3O60307 1309 aa18.29■□□□□ 0.52
LIMS4-201ENST00000413601 FKBP1BP68106 108 aa18.29■□□□□ 0.52
LIMS4-201ENST00000413601 TTLL12Q14166 644 aaPredicted RBP18.29■□□□□ 0.52
LIMS4-201ENST00000413601 WBP1LQ9NX94 342 aa18.29■□□□□ 0.52
LIMS4-201ENST00000413601 NOP58Q9Y2X3 529 aaKnown RBP18.29■□□□□ 0.52
LIMS4-201ENST00000413601 UBE2Q2LH0YL09 131 aa18.28■□□□□ 0.52
LIMS4-201ENST00000413601 PRDX5P30044 214 aa18.28■□□□□ 0.52
LIMS4-201ENST00000413601 MAP2K2P36507 400 aa18.28■□□□□ 0.52
LIMS4-201ENST00000413601 ZNF157P51786 506 aaPredicted RBP18.28■□□□□ 0.52
LIMS4-201ENST00000413601 RASGRF1Q13972 1273 aa18.28■□□□□ 0.52
LIMS4-201ENST00000413601 PRKG1Q13976 671 aa18.28■□□□□ 0.52
LIMS4-201ENST00000413601 GORABQ5T7V8 394 aa18.28■□□□□ 0.52
LIMS4-201ENST00000413601 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.28■□□□□ 0.52
LIMS4-201ENST00000413601 MRIQ9BWK5 157 aa18.28■□□□□ 0.52
LIMS4-201ENST00000413601 ZBTB40Q9NUA8 1239 aa18.28■□□□□ 0.52
LIMS4-201ENST00000413601 AK9Q5TCS8 1911 aa18.27■□□□□ 0.52
LIMS4-201ENST00000413601 AKAP11Q9UKA4 1901 aa18.27■□□□□ 0.52
LIMS4-201ENST00000413601 SALL1Q9NSC2 1324 aa18.27■□□□□ 0.52
LIMS4-201ENST00000413601 MYO5AQ9Y4I1 1855 aaKnown RBP18.27■□□□□ 0.52
LIMS4-201ENST00000413601 FAM155AB1AL88 458 aaPredicted RBP18.27■□□□□ 0.52
LIMS4-201ENST00000413601 FOXN1O15353 648 aa18.27■□□□□ 0.52
LIMS4-201ENST00000413601 LDHBP07195 334 aaKnown RBP18.27■□□□□ 0.52
LIMS4-201ENST00000413601 MAP2K1Q02750 393 aaPredicted RBP18.27■□□□□ 0.52
LIMS4-201ENST00000413601 HHIPL2Q6UWX4 724 aa18.27■□□□□ 0.52
LIMS4-201ENST00000413601 AIDAQ96BJ3 306 aa18.27■□□□□ 0.52
LIMS4-201ENST00000413601 ZDHHC15Q96MV8 337 aa18.27■□□□□ 0.52
LIMS4-201ENST00000413601 ZIC5Q96T25 663 aa18.27■□□□□ 0.52
LIMS4-201ENST00000413601 PPP2R3BQ9Y5P8 575 aa18.27■□□□□ 0.52
LIMS4-201ENST00000413601 TCP10L2B9ZVM9 353 aa18.26■□□□□ 0.51
LIMS4-201ENST00000413601 ZBTB22O15209 634 aa18.26■□□□□ 0.51
LIMS4-201ENST00000413601 PDE3AQ14432 1141 aa18.26■□□□□ 0.51
LIMS4-201ENST00000413601 RASA3Q14644 834 aa18.26■□□□□ 0.51
LIMS4-201ENST00000413601 TNNI3KQ59H18 835 aa18.26■□□□□ 0.51
LIMS4-201ENST00000413601 CCDC102AQ96A19 550 aa18.26■□□□□ 0.51
LIMS4-201ENST00000413601 GPR108Q9NPR9 543 aa18.26■□□□□ 0.51
LIMS4-201ENST00000413601 FZD1Q9UP38 647 aa18.26■□□□□ 0.51
LIMS4-201ENST00000413601 FPGT-TNNI3KV9GXZ4 949 aa18.26■□□□□ 0.51
LIMS4-201ENST00000413601 SSC5DA1L4H1 1573 aa18.25■□□□□ 0.51
LIMS4-201ENST00000413601 CACNB3P54284 484 aa18.25■□□□□ 0.51
LIMS4-201ENST00000413601 NOGQ13253 232 aa18.25■□□□□ 0.51
LIMS4-201ENST00000413601 TNFAIP1Q13829 316 aa18.25■□□□□ 0.51
LIMS4-201ENST00000413601 DIXDC1Q155Q3 683 aa18.25■□□□□ 0.51
LIMS4-201ENST00000413601 NBPF12Q5TAG4 269 aaPredicted RBP18.25■□□□□ 0.51
LIMS4-201ENST00000413601 APOBEC3HQ6NTF7 200 aaKnown RBP18.25■□□□□ 0.51
LIMS4-201ENST00000413601 EXOC6BQ9Y2D4 811 aa18.25■□□□□ 0.51
LIMS4-201ENST00000413601 PDS5AQ29RF7 1337 aaKnown RBP18.24■□□□□ 0.51
LIMS4-201ENST00000413601 OTOFQ9HC10 1997 aa18.24■□□□□ 0.51
LIMS4-201ENST00000413601 PI16Q6UXB8 463 aa18.24■□□□□ 0.51
LIMS4-201ENST00000413601 ARMC9Q7Z3E5 817 aa18.24■□□□□ 0.51
LIMS4-201ENST00000413601 ZGPATQ8N5A5 531 aaKnown RBP18.24■□□□□ 0.51
LIMS4-201ENST00000413601 DBNDD2Q9BQY9 259 aa18.24■□□□□ 0.51
LIMS4-201ENST00000413601 CHMP4BQ9H444 224 aaKnown RBP18.24■□□□□ 0.51
LIMS4-201ENST00000413601 HMG20BQ9P0W2 317 aa18.24■□□□□ 0.51
LIMS4-201ENST00000413601 ABCF2Q9UG63 623 aa18.24■□□□□ 0.51
LIMS4-201ENST00000413601 ANGEL1Q9UNK9 670 aaKnown RBP18.24■□□□□ 0.51
LIMS4-201ENST00000413601 SLC10A3P09131 477 aa18.23■□□□□ 0.51
LIMS4-201ENST00000413601 ARID4AP29374 1257 aaPredicted RBP18.23■□□□□ 0.51
LIMS4-201ENST00000413601 SUPT20HL1Q3ZLR7 823 aa18.23■□□□□ 0.51
LIMS4-201ENST00000413601 COL13A1Q5TAT6 717 aaPredicted RBP18.23■□□□□ 0.51
LIMS4-201ENST00000413601 RASAL3Q86YV0 1011 aa18.23■□□□□ 0.51
LIMS4-201ENST00000413601 SIRT2Q8IXJ6 389 aa18.23■□□□□ 0.51
LIMS4-201ENST00000413601 RPAP2Q8IXW5 612 aaPredicted RBP18.23■□□□□ 0.51
LIMS4-201ENST00000413601 SPATA5Q8NB90 893 aa18.23■□□□□ 0.51
LIMS4-201ENST00000413601 BEGAINQ9BUH8 593 aa18.23■□□□□ 0.51
LIMS4-201ENST00000413601 DAGLAQ9Y4D2 1042 aa18.23■□□□□ 0.51
LIMS4-201ENST00000413601 UQCRFS1P1P0C7P4 283 aa18.22■□□□□ 0.51
LIMS4-201ENST00000413601 MCAMP43121 646 aa18.22■□□□□ 0.51
LIMS4-201ENST00000413601 TNNI2P48788 182 aa18.22■□□□□ 0.51
LIMS4-201ENST00000413601 CTCFP49711 727 aaPredicted RBP18.22■□□□□ 0.51
LIMS4-201ENST00000413601 KIF23Q02241 960 aaPredicted RBP18.22■□□□□ 0.51
LIMS4-201ENST00000413601 CDAN1Q8IWY9 1227 aa18.22■□□□□ 0.51
LIMS4-201ENST00000413601 TEPSINQ96N21 525 aa18.22■□□□□ 0.51
LIMS4-201ENST00000413601 TMEM39BQ9GZU3 492 aa18.22■□□□□ 0.51
LIMS4-201ENST00000413601 TMOD2Q9NZR1 351 aa18.22■□□□□ 0.51
LIMS4-201ENST00000413601 PPP1R12BO60237 982 aaPredicted RBP18.21■□□□□ 0.51
LIMS4-201ENST00000413601 TTC39AQ5SRH9 613 aa18.21■□□□□ 0.51
LIMS4-201ENST00000413601 SPTY2D1Q68D10 685 aaPredicted RBP18.21■□□□□ 0.51
LIMS4-201ENST00000413601 TBC1D9Q6ZT07 1266 aa18.21■□□□□ 0.51
LIMS4-201ENST00000413601 DZIP1Q86YF9 867 aaKnown RBP18.21■□□□□ 0.51
LIMS4-201ENST00000413601 EAF2Q96CJ1 260 aaPredicted RBP18.21■□□□□ 0.51
LIMS4-201ENST00000413601 CCDC8Q9H0W5 538 aaPredicted RBP18.21■□□□□ 0.51
LIMS4-201ENST00000413601 HMMRO75330 724 aa18.2■□□□□ 0.5
LIMS4-201ENST00000413601 LBX1P52954 281 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms