RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 CNKSR2Q8WXI2 1034 aa15.41■□□□□ 0.06
LIMS2-210ENST00000413578 BRI3BPQ8WY22 251 aa15.41■□□□□ 0.06
LIMS2-210ENST00000413578 ELP3Q9H9T3 547 aa15.41■□□□□ 0.06
LIMS2-210ENST00000413578 EFCC1Q9HA90 598 aa15.41■□□□□ 0.06
LIMS2-210ENST00000413578 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.41■□□□□ 0.06
LIMS2-210ENST00000413578 UTYO14607 1347 aa15.41■□□□□ 0.06
LIMS2-210ENST00000413578 OTOFQ9HC10 1997 aa15.4■□□□□ 0.06
LIMS2-210ENST00000413578 CRKP46108 304 aa15.4■□□□□ 0.06
LIMS2-210ENST00000413578 VGLL4Q14135 290 aa15.4■□□□□ 0.06
LIMS2-210ENST00000413578 TAF7LQ5H9L4 462 aa15.4■□□□□ 0.06
LIMS2-210ENST00000413578 FBXO33Q7Z6M2 555 aa15.4■□□□□ 0.06
LIMS2-210ENST00000413578 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.4■□□□□ 0.06
LIMS2-210ENST00000413578 GCC1Q96CN9 775 aa15.4■□□□□ 0.06
LIMS2-210ENST00000413578 TMEM39BQ9GZU3 492 aa15.4■□□□□ 0.06
LIMS2-210ENST00000413578 C9orf78Q9NZ63 289 aaPredicted RBP15.4■□□□□ 0.06
LIMS2-210ENST00000413578 KIAA0100Q14667 2235 aaKnown RBP15.4■□□□□ 0.06
LIMS2-210ENST00000413578 NBPF7P0C2Y1 421 aaPredicted RBP15.39■□□□□ 0.05
LIMS2-210ENST00000413578 MAP3K9P80192 1104 aa15.39■□□□□ 0.05
LIMS2-210ENST00000413578 HDLBPQ00341 1268 aaKnown RBP15.39■□□□□ 0.05
LIMS2-210ENST00000413578 RABL6Q3YEC7 729 aaPredicted RBP15.39■□□□□ 0.05
LIMS2-210ENST00000413578 ZNF333Q96JL9 665 aa15.39■□□□□ 0.05
LIMS2-210ENST00000413578 SRCIN1Q9C0H9 1055 aa15.39■□□□□ 0.05
LIMS2-210ENST00000413578 MRS2Q9HD23 443 aa15.39■□□□□ 0.05
LIMS2-210ENST00000413578 SALL2Q9Y467 1007 aaPredicted RBP15.39■□□□□ 0.05
LIMS2-210ENST00000413578 MROH5Q6ZUA9 1318 aa15.39■□□□□ 0.05
LIMS2-210ENST00000413578 ARAP2Q8WZ64 1704 aa15.38■□□□□ 0.05
LIMS2-210ENST00000413578 TCP10L2B9ZVM9 353 aa15.38■□□□□ 0.05
LIMS2-210ENST00000413578 FAM43AQ8N2R8 423 aa15.38■□□□□ 0.05
LIMS2-210ENST00000413578 VGLL2Q8N8G2 317 aa15.38■□□□□ 0.05
LIMS2-210ENST00000413578 RBBP6Q7Z6E9 1792 aaKnown RBP15.38■□□□□ 0.05
LIMS2-210ENST00000413578 CCL15-CCL14A0A0B4J2E2 113 aa15.37■□□□□ 0.05
LIMS2-210ENST00000413578 SPDYE5A6NIY4 337 aa15.37■□□□□ 0.05
LIMS2-210ENST00000413578 EN2P19622 333 aaPredicted RBP15.37■□□□□ 0.05
LIMS2-210ENST00000413578 GTF2A2P52657 109 aa15.37■□□□□ 0.05
LIMS2-210ENST00000413578 CCL15Q16663 113 aa15.37■□□□□ 0.05
LIMS2-210ENST00000413578 HABP4Q5JVS0 413 aaKnown RBP15.37■□□□□ 0.05
LIMS2-210ENST00000413578 ANKRD44Q8N8A2 993 aa15.37■□□□□ 0.05
LIMS2-210ENST00000413578 MRIQ9BWK5 157 aa15.37■□□□□ 0.05
LIMS2-210ENST00000413578 SNCAIPQ9Y6H5 919 aa15.37■□□□□ 0.05
LIMS2-210ENST00000413578 TNNI2P48788 182 aa15.36■□□□□ 0.05
LIMS2-210ENST00000413578 TAF1CQ15572 869 aaPredicted RBP15.36■□□□□ 0.05
LIMS2-210ENST00000413578 LRRC24Q50LG9 513 aa15.36■□□□□ 0.05
LIMS2-210ENST00000413578 TBC1D22AQ8WUA7 517 aa15.36■□□□□ 0.05
LIMS2-210ENST00000413578 BICC1Q9H694 974 aaKnown RBP15.36■□□□□ 0.05
LIMS2-210ENST00000413578 ZFYVE28Q9HCC9 887 aa15.36■□□□□ 0.05
LIMS2-210ENST00000413578 APOBEC3HQ6NTF7 200 aaKnown RBP15.35■□□□□ 0.05
LIMS2-210ENST00000413578 SLC4A10Q6U841 1118 aa15.35■□□□□ 0.05
LIMS2-210ENST00000413578 ZDHHC15Q96MV8 337 aa15.35■□□□□ 0.05
LIMS2-210ENST00000413578 IQSEC3Q9UPP2 1182 aaPredicted RBP15.35■□□□□ 0.05
LIMS2-210ENST00000413578 PTCH2Q9Y6C5 1203 aa15.35■□□□□ 0.05
LIMS2-210ENST00000413578 PDE8BO95263 885 aa15.34■□□□□ 0.05
LIMS2-210ENST00000413578 CACNB3P54284 484 aa15.34■□□□□ 0.05
LIMS2-210ENST00000413578 FKBP1CQ5VVH2 108 aa15.34■□□□□ 0.05
LIMS2-210ENST00000413578 FAM83AQ86UY5 434 aa15.34■□□□□ 0.05
LIMS2-210ENST00000413578 OTUD5Q96G74 571 aa15.34■□□□□ 0.05
LIMS2-210ENST00000413578 ZCCHC17Q9NP64 241 aaKnown RBP15.34■□□□□ 0.05
LIMS2-210ENST00000413578 CSADQ9Y600 493 aa15.34■□□□□ 0.05
LIMS2-210ENST00000413578 ZNF521Q96K83 1311 aa15.34■□□□□ 0.05
LIMS2-210ENST00000413578 KIF16BQ96L93 1317 aa15.34■□□□□ 0.05
LIMS2-210ENST00000413578 RPAP1Q9BWH6 1393 aaPredicted RBP15.34■□□□□ 0.05
LIMS2-210ENST00000413578 TLR2O60603 784 aa15.33■□□□□ 0.04
LIMS2-210ENST00000413578 FGFR2P21802 821 aa15.33■□□□□ 0.04
LIMS2-210ENST00000413578 BCAMP50895 628 aa15.33■□□□□ 0.04
LIMS2-210ENST00000413578 CHAF1AQ13111 956 aaPredicted RBP15.33■□□□□ 0.04
LIMS2-210ENST00000413578 ERO1BQ86YB8 467 aa15.33■□□□□ 0.04
LIMS2-210ENST00000413578 TEKT1Q969V4 418 aa15.33■□□□□ 0.04
LIMS2-210ENST00000413578 SUGT1Q9Y2Z0 365 aa15.33■□□□□ 0.04
LIMS2-210ENST00000413578 BTBD19C9JJ37 291 aa15.32■□□□□ 0.04
LIMS2-210ENST00000413578 IRF6O14896 467 aa15.32■□□□□ 0.04
LIMS2-210ENST00000413578 CETPP11597 493 aa15.32■□□□□ 0.04
LIMS2-210ENST00000413578 ARHGEF6Q15052 776 aa15.32■□□□□ 0.04
LIMS2-210ENST00000413578 CAVIN4Q5BKX8 364 aa15.32■□□□□ 0.04
LIMS2-210ENST00000413578 METTL24Q5JXM2 366 aa15.32■□□□□ 0.04
LIMS2-210ENST00000413578 VPS37DQ86XT2 251 aa15.32■□□□□ 0.04
LIMS2-210ENST00000413578 MRPL50Q8N5N7 158 aaKnown RBP15.32■□□□□ 0.04
LIMS2-210ENST00000413578 WRNIP1Q96S55 665 aa15.32■□□□□ 0.04
LIMS2-210ENST00000413578 LACTBP83111 547 aaPredicted RBP15.31■□□□□ 0.04
LIMS2-210ENST00000413578 PPIL2Q13356 520 aa15.31■□□□□ 0.04
LIMS2-210ENST00000413578 SNAPC2Q13487 334 aa15.31■□□□□ 0.04
LIMS2-210ENST00000413578 SLC9C1Q4G0N8 1177 aa15.31■□□□□ 0.04
LIMS2-210ENST00000413578 HHIPL2Q6UWX4 724 aa15.31■□□□□ 0.04
LIMS2-210ENST00000413578 KLHDC4Q8TBB5 520 aa15.31■□□□□ 0.04
LIMS2-210ENST00000413578 ZKSCAN4Q969J2 545 aaPredicted RBP15.31■□□□□ 0.04
LIMS2-210ENST00000413578 TMEM106CQ9BVX2 250 aa15.31■□□□□ 0.04
LIMS2-210ENST00000413578 ARHGAP39Q9C0H5 1083 aa15.31■□□□□ 0.04
LIMS2-210ENST00000413578 RFX5P48382 616 aaPredicted RBP15.3■□□□□ 0.04
LIMS2-210ENST00000413578 NBPF11Q86T75 865 aa15.3■□□□□ 0.04
LIMS2-210ENST00000413578 USP44Q9H0E7 712 aa15.3■□□□□ 0.04
LIMS2-210ENST00000413578 MAST3O60307 1309 aa15.29■□□□□ 0.04
LIMS2-210ENST00000413578 ADGRA2Q96PE1 1338 aa15.29■□□□□ 0.04
LIMS2-210ENST00000413578 FRAT2O75474 233 aaPredicted RBP15.29■□□□□ 0.04
LIMS2-210ENST00000413578 CTGFP29279 349 aa15.29■□□□□ 0.04
LIMS2-210ENST00000413578 FXR1P51114 621 aaKnown RBP eCLIP15.29■□□□□ 0.04
LIMS2-210ENST00000413578 PPATQ06203 517 aa15.29■□□□□ 0.04
LIMS2-210ENST00000413578 PUM3Q15397 648 aaKnown RBP15.29■□□□□ 0.04
LIMS2-210ENST00000413578 C17orf99Q6UX52 265 aa15.29■□□□□ 0.04
LIMS2-210ENST00000413578 HOOK2Q96ED9 719 aa15.29■□□□□ 0.04
LIMS2-210ENST00000413578 TMOD2Q9NZR1 351 aa15.29■□□□□ 0.04
LIMS2-210ENST00000413578 ZNF112Q9UJU3 913 aa15.29■□□□□ 0.04
LIMS2-210ENST00000413578 PTPRCP08575 1304 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms