RNA–Protein interactions for RNA: ENST00000413170.1

PCCA-204, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-204ENST00000413170 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.4■□□□□ 0.22
PCCA-204ENST00000413170 TRIM47Q96LD4 638 aa16.4■□□□□ 0.22
PCCA-204ENST00000413170 COL25A1Q9BXS0 654 aaPredicted RBP16.4■□□□□ 0.22
PCCA-204ENST00000413170 CPA4Q9UI42 421 aa16.4■□□□□ 0.22
PCCA-204ENST00000413170 TRIM35Q9UPQ4 493 aa16.4■□□□□ 0.22
PCCA-204ENST00000413170 CETPP11597 493 aa16.39■□□□□ 0.21
PCCA-204ENST00000413170 OSBPP22059 807 aa16.39■□□□□ 0.21
PCCA-204ENST00000413170 U2AF1L4Q8WU68 220 aaKnown RBP16.39■□□□□ 0.21
PCCA-204ENST00000413170 TEPSINQ96N21 525 aa16.39■□□□□ 0.21
PCCA-204ENST00000413170 MPHOSPH8Q99549 860 aa16.39■□□□□ 0.21
PCCA-204ENST00000413170 TMEM39BQ9GZU3 492 aa16.39■□□□□ 0.21
PCCA-204ENST00000413170 ZNF70Q9UC06 446 aaPredicted RBP16.39■□□□□ 0.21
PCCA-204ENST00000413170 MAP3K2Q9Y2U5 619 aa16.39■□□□□ 0.21
PCCA-204ENST00000413170 MYH3P11055 1940 aa16.39■□□□□ 0.21
PCCA-204ENST00000413170 TCP10L2B9ZVM9 353 aa16.38■□□□□ 0.21
PCCA-204ENST00000413170 ELL2O00472 640 aaPredicted RBP16.38■□□□□ 0.21
PCCA-204ENST00000413170 FMNL1O95466 1100 aaPredicted RBP16.38■□□□□ 0.21
PCCA-204ENST00000413170 IGKV5-2P06315 115 aa16.38■□□□□ 0.21
PCCA-204ENST00000413170 ITGA6P23229 1130 aa16.38■□□□□ 0.21
PCCA-204ENST00000413170 CHRNDQ07001 517 aa16.38■□□□□ 0.21
PCCA-204ENST00000413170 SPDYE2Q495Y8 402 aa16.38■□□□□ 0.21
PCCA-204ENST00000413170 TDRD3Q9H7E2 651 aaKnown RBP16.38■□□□□ 0.21
PCCA-204ENST00000413170 MBIPQ9NS73 344 aa16.38■□□□□ 0.21
PCCA-204ENST00000413170 MYPNQ86TC9 1320 aa16.38■□□□□ 0.21
PCCA-204ENST00000413170 SPDYE5A6NIY4 337 aa16.37■□□□□ 0.21
PCCA-204ENST00000413170 DDX58O95786 925 aaKnown RBP16.37■□□□□ 0.21
PCCA-204ENST00000413170 UBXN2AP68543 259 aa16.37■□□□□ 0.21
PCCA-204ENST00000413170 UNC93B1Q9H1C4 597 aa16.37■□□□□ 0.21
PCCA-204ENST00000413170 SNCAIPQ9Y6H5 919 aa16.37■□□□□ 0.21
PCCA-204ENST00000413170 IRS2Q9Y4H2 1338 aa16.37■□□□□ 0.21
PCCA-204ENST00000413170 IRF6O14896 467 aa16.36■□□□□ 0.21
PCCA-204ENST00000413170 TAF5LO75529 589 aa16.36■□□□□ 0.21
PCCA-204ENST00000413170 HOXD10P28358 340 aa16.36■□□□□ 0.21
PCCA-204ENST00000413170 SNAPC2Q13487 334 aa16.36■□□□□ 0.21
PCCA-204ENST00000413170 CWF19L2Q2TBE0 894 aaKnown RBP16.36■□□□□ 0.21
PCCA-204ENST00000413170 C17orf99Q6UX52 265 aa16.36■□□□□ 0.21
PCCA-204ENST00000413170 UBE3BQ7Z3V4 1068 aa16.36■□□□□ 0.21
PCCA-204ENST00000413170 ZNF804AQ7Z570 1209 aa16.36■□□□□ 0.21
PCCA-204ENST00000413170 HELBQ8NG08 1087 aaPredicted RBP16.36■□□□□ 0.21
PCCA-204ENST00000413170 ZCCHC17Q9NP64 241 aaKnown RBP16.36■□□□□ 0.21
PCCA-204ENST00000413170 STXBP5LQ9Y2K9 1186 aa16.36■□□□□ 0.21
PCCA-204ENST00000413170 IL1R1P14778 569 aa16.35■□□□□ 0.21
PCCA-204ENST00000413170 PRKCZQ05513 592 aa16.35■□□□□ 0.21
PCCA-204ENST00000413170 FKBP1AP62942 108 aaKnown RBP16.34■□□□□ 0.21
PCCA-204ENST00000413170 ERO1BQ86YB8 467 aa16.34■□□□□ 0.21
PCCA-204ENST00000413170 ZKSCAN4Q969J2 545 aaPredicted RBP16.34■□□□□ 0.21
PCCA-204ENST00000413170 WRNIP1Q96S55 665 aa16.34■□□□□ 0.21
PCCA-204ENST00000413170 VCANP13611 3396 aa16.34■□□□□ 0.21
PCCA-204ENST00000413170 ARAP2Q8WZ64 1704 aa16.33■□□□□ 0.21
PCCA-204ENST00000413170 PI4KAP2A4QPH2 592 aa16.33■□□□□ 0.2
PCCA-204ENST00000413170 SGPL1O95470 568 aa16.33■□□□□ 0.2
PCCA-204ENST00000413170 GPR153Q6NV75 609 aa16.33■□□□□ 0.2
PCCA-204ENST00000413170 DZIP1LQ8IYY4 767 aaKnown RBP16.33■□□□□ 0.2
PCCA-204ENST00000413170 PI4KAP1Q8N8J0 262 aa16.33■□□□□ 0.2
PCCA-204ENST00000413170 TTF2Q9UNY4 1162 aaKnown RBP16.33■□□□□ 0.2
PCCA-204ENST00000413170 NEURL1BA8MQ27 555 aa16.32■□□□□ 0.2
PCCA-204ENST00000413170 TFRCP02786 760 aaKnown RBP16.32■□□□□ 0.2
PCCA-204ENST00000413170 TNNI2P48788 182 aa16.32■□□□□ 0.2
PCCA-204ENST00000413170 NEXNQ0ZGT2 675 aa16.32■□□□□ 0.2
PCCA-204ENST00000413170 PPIL2Q13356 520 aa16.32■□□□□ 0.2
PCCA-204ENST00000413170 C15orf52Q6ZUT6 534 aaKnown RBP16.32■□□□□ 0.2
PCCA-204ENST00000413170 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.32■□□□□ 0.2
PCCA-204ENST00000413170 SLAIN1Q8ND83 568 aa16.32■□□□□ 0.2
PCCA-204ENST00000413170 MTMR10Q9NXD2 777 aa16.32■□□□□ 0.2
PCCA-204ENST00000413170 SERPINA10Q9UK55 444 aa16.32■□□□□ 0.2
PCCA-204ENST00000413170 ZMYND8Q9ULU4 1186 aaPredicted RBP16.32■□□□□ 0.2
PCCA-204ENST00000413170 ADGRA2Q96PE1 1338 aa16.31■□□□□ 0.2
PCCA-204ENST00000413170 PDHXO00330 501 aa16.31■□□□□ 0.2
PCCA-204ENST00000413170 CACNB3P54284 484 aa16.31■□□□□ 0.2
PCCA-204ENST00000413170 MFSD14BQ5SR56 506 aa16.31■□□□□ 0.2
PCCA-204ENST00000413170 KSR2Q6VAB6 950 aa16.31■□□□□ 0.2
PCCA-204ENST00000413170 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.31■□□□□ 0.2
PCCA-204ENST00000413170 C7orf61Q8IZ16 206 aa16.31■□□□□ 0.2
PCCA-204ENST00000413170 GDF15Q99988 308 aa16.31■□□□□ 0.2
PCCA-204ENST00000413170 GABRQQ9UN88 632 aa16.31■□□□□ 0.2
PCCA-204ENST00000413170 H7C1W4 665 aa16.3■□□□□ 0.2
PCCA-204ENST00000413170 BCAMP50895 628 aa16.3■□□□□ 0.2
PCCA-204ENST00000413170 DEFB118Q96PH6 123 aa16.3■□□□□ 0.2
PCCA-204ENST00000413170 INHAP05111 366 aa16.29■□□□□ 0.2
PCCA-204ENST00000413170 ELNP15502 786 aa16.29■□□□□ 0.2
PCCA-204ENST00000413170 BMP8BP34820 402 aa16.29■□□□□ 0.2
PCCA-204ENST00000413170 CRKP46108 304 aa16.29■□□□□ 0.2
PCCA-204ENST00000413170 FCGRTP55899 365 aa16.29■□□□□ 0.2
PCCA-204ENST00000413170 ANKRD23Q86SG2 305 aa16.29■□□□□ 0.2
PCCA-204ENST00000413170 DIS3LQ8TF46 1054 aaKnown RBP16.29■□□□□ 0.2
PCCA-204ENST00000413170 RUNDC1Q96C34 613 aa16.29■□□□□ 0.2
PCCA-204ENST00000413170 PAWRQ96IZ0 340 aaKnown RBP16.29■□□□□ 0.2
PCCA-204ENST00000413170 ALPK3Q96L96 1907 aa16.29■□□□□ 0.2
PCCA-204ENST00000413170 ANKRD18BA2A2Z9 1011 aa16.28■□□□□ 0.2
PCCA-204ENST00000413170 PLIN1O60240 522 aa16.28■□□□□ 0.2
PCCA-204ENST00000413170 ADCY3O60266 1144 aa16.28■□□□□ 0.2
PCCA-204ENST00000413170 CCDC30Q5VVM6 783 aa16.28■□□□□ 0.2
PCCA-204ENST00000413170 C8orf58Q8NAV2 365 aa16.28■□□□□ 0.2
PCCA-204ENST00000413170 PLA2G12BQ9BX93 195 aa16.28■□□□□ 0.2
PCCA-204ENST00000413170 A0A1B0GUL6 1792 aa16.28■□□□□ 0.2
PCCA-204ENST00000413170 FAM205AQ6ZU69 1335 aa16.27■□□□□ 0.2
PCCA-204ENST00000413170 SPTBN5Q9NRC6 3674 aaKnown RBP16.27■□□□□ 0.2
PCCA-204ENST00000413170 CSF1RP07333 972 aa16.27■□□□□ 0.2
PCCA-204ENST00000413170 ZNF853P0CG23 659 aa16.27■□□□□ 0.2
PCCA-204ENST00000413170 SYN1P17600 705 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms