RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 ATP2C2O75185 946 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 PDCD2Q16342 344 aaPredicted RBP9.64□□□□□ -0.87
PBRM1-209ENST00000412587 CCDC38Q502W7 563 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 CEP85Q6P2H3 762 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 LARP6Q9BRS8 491 aaKnown RBP9.64□□□□□ -0.87
PBRM1-209ENST00000412587 MLH3Q9UHC1 1453 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 HOXB7P09629 217 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 CYP7A1P22680 504 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 GSTO1P78417 241 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 NCOA7Q8NI08 942 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 DCTPP1Q9H773 170 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 LGR6Q9HBX8 967 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 USP16Q9Y5T5 823 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 CHL1O00533 1208 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 HLA-DOAP06340 250 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 ZFYVE27Q5T4F4 411 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 ZNF513Q8N8E2 541 aaPredicted RBP9.64□□□□□ -0.87
PBRM1-209ENST00000412587 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.64□□□□□ -0.87
PBRM1-209ENST00000412587 MAGI2Q86UL8 1455 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 SSRP1Q08945 709 aaKnown RBP9.63□□□□□ -0.87
PBRM1-209ENST00000412587 SNCBQ16143 134 aa9.63□□□□□ -0.87
PBRM1-209ENST00000412587 ZGPATQ8N5A5 531 aaKnown RBP9.63□□□□□ -0.87
PBRM1-209ENST00000412587 FAM71BQ8TC56 605 aa9.63□□□□□ -0.87
PBRM1-209ENST00000412587 ZBTB40Q9NUA8 1239 aa9.63□□□□□ -0.87
PBRM1-209ENST00000412587 CLCN6P51797 869 aa9.63□□□□□ -0.87
PBRM1-209ENST00000412587 G2E3Q7L622 706 aa9.63□□□□□ -0.87
PBRM1-209ENST00000412587 GNPATO15228 680 aa9.63□□□□□ -0.87
PBRM1-209ENST00000412587 INTS4Q96HW7 963 aaKnown RBP9.63□□□□□ -0.87
PBRM1-209ENST00000412587 FAM210AQ96ND0 272 aa9.63□□□□□ -0.87
PBRM1-209ENST00000412587 IARSP41252 1262 aaKnown RBP9.63□□□□□ -0.87
PBRM1-209ENST00000412587 SH3BGRP55822 239 aaPredicted RBP9.63□□□□□ -0.87
PBRM1-209ENST00000412587 TTLL12Q14166 644 aaPredicted RBP9.63□□□□□ -0.87
PBRM1-209ENST00000412587 KMT5BQ4FZB7 885 aa9.63□□□□□ -0.87
PBRM1-209ENST00000412587 MICU3Q86XE3 530 aa9.63□□□□□ -0.87
PBRM1-209ENST00000412587 GPT2Q8TD30 523 aa9.63□□□□□ -0.87
PBRM1-209ENST00000412587 CABP5Q9NP86 173 aa9.63□□□□□ -0.87
PBRM1-209ENST00000412587 FRMD3A2A2Y4 597 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 PPFIA4O75335 1185 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 TUBB2AQ13885 445 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 SH2D4BQ5SQS7 431 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 SLC9C2Q5TAH2 1124 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 C16orf71Q8IYS4 520 aaPredicted RBP9.62□□□□□ -0.87
PBRM1-209ENST00000412587 ARFGAP2Q8N6H7 521 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 ANKS4BQ8N8V4 417 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 HELBQ8NG08 1087 aaPredicted RBP9.62□□□□□ -0.87
PBRM1-209ENST00000412587 TUBB2BQ9BVA1 445 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 DNAJC25Q9H1X3 360 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 NSFL1CQ9UNZ2 370 aaKnown RBP9.62□□□□□ -0.87
PBRM1-209ENST00000412587 SAMD9LQ8IVG5 1584 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 CCDC194A0A1B0GVG4 234 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 GOLGA6CA6NDK9 693 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 GOLGA6DP0CG33 693 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 GYS2P54840 703 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 NLRP5P59047 1200 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 NAA16Q6N069 864 aaPredicted RBP9.62□□□□□ -0.87
PBRM1-209ENST00000412587 TANGO6Q9C0B7 1094 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 ZC3H12CQ9C0D7 883 aaKnown RBP9.62□□□□□ -0.87
PBRM1-209ENST00000412587 SLC52A2Q9HAB3 445 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 GOLGA6AQ9NYA3 693 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 TRIM35Q9UPQ4 493 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 ADGBQ8N7X0 1667 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 SBNO2Q9Y2G9 1366 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 ZEB2O60315 1214 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 WDHD1O75717 1129 aaPredicted RBP9.62□□□□□ -0.87
PBRM1-209ENST00000412587 TEX11Q8IYF3 940 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 PLBD2Q8NHP8 589 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 CTIFO43310 598 aaKnown RBP9.62□□□□□ -0.87
PBRM1-209ENST00000412587 LUC7L3O95232 432 aaKnown RBP9.62□□□□□ -0.87
PBRM1-209ENST00000412587 SYT1P21579 422 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 RWDD2BP57060 319 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 CKAP4Q07065 602 aaKnown RBP9.62□□□□□ -0.87
PBRM1-209ENST00000412587 MCMDC2Q4G0Z9 681 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 TRAPPC3LQ5T215 181 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 TBC1D31Q96DN5 1066 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 ESYT1Q9BSJ8 1104 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 KAT14Q9H8E8 782 aa9.62□□□□□ -0.87
PBRM1-209ENST00000412587 ORC3Q9UBD5 711 aaPredicted RBP9.62□□□□□ -0.87
PBRM1-209ENST00000412587 CCNL1Q9UK58 526 aaPredicted RBP9.62□□□□□ -0.87
PBRM1-209ENST00000412587 TRAF1Q13077 416 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 TNIP1Q15025 636 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 FAM98CQ17RN3 349 aaKnown RBP9.61□□□□□ -0.87
PBRM1-209ENST00000412587 VCXQ9H320 206 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 PARP3Q9Y6F1 533 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 TTC41PQ6P2S7 1318 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 METP08581 1390 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 EFCAB6Q5THR3 1501 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 MYO1BO43795 1136 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 CHMP4BP1P59074 171 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 PSMD2Q13200 908 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 SLC4A8Q2Y0W8 1093 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 FAM89AQ96GI7 184 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 TRIM4Q9C037 500 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 ADAM21Q9UKJ8 722 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 STX8Q9UNK0 236 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 RBM8AQ9Y5S9 174 aaKnown RBP9.61□□□□□ -0.87
PBRM1-209ENST00000412587 ELF1P32519 619 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 NBPF14Q5TI25 921 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 EP400NLQ6ZTU2 488 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 CCDC144CPQ8IYA2 1237 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 CNNM3Q8NE01 707 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms