RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 SLC10A4Q96EP9 437 aa20.74■□□□□ 0.91
SCAMP4-203ENST00000411971 TMEM39BQ9GZU3 492 aa20.74■□□□□ 0.91
SCAMP4-203ENST00000411971 SMC4Q9NTJ3 1288 aa20.74■□□□□ 0.91
SCAMP4-203ENST00000411971 TCP10L2B9ZVM9 353 aa20.73■□□□□ 0.91
SCAMP4-203ENST00000411971 MYO1BO43795 1136 aa20.73■□□□□ 0.91
SCAMP4-203ENST00000411971 CNKSR2Q8WXI2 1034 aa20.73■□□□□ 0.91
SCAMP4-203ENST00000411971 CFHR5Q9BXR6 569 aa20.72■□□□□ 0.91
SCAMP4-203ENST00000411971 NOB1Q9ULX3 412 aaKnown RBP20.72■□□□□ 0.91
SCAMP4-203ENST00000411971 HPS5Q9UPZ3 1129 aa20.72■□□□□ 0.91
SCAMP4-203ENST00000411971 EYA2O00167 538 aa20.71■□□□□ 0.91
SCAMP4-203ENST00000411971 PPP1R12BO60237 982 aaPredicted RBP20.71■□□□□ 0.91
SCAMP4-203ENST00000411971 CAP1Q01518 475 aa20.71■□□□□ 0.91
SCAMP4-203ENST00000411971 SREBF2Q12772 1141 aa20.71■□□□□ 0.91
SCAMP4-203ENST00000411971 SUPT20HL1Q3ZLR7 823 aa20.71■□□□□ 0.91
SCAMP4-203ENST00000411971 IFNL1Q8IU54 200 aa20.71■□□□□ 0.91
SCAMP4-203ENST00000411971 PTPN18Q99952 460 aa20.71■□□□□ 0.91
SCAMP4-203ENST00000411971 CENPFP49454 3210 aa20.7■□□□□ 0.9
SCAMP4-203ENST00000411971 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.7■□□□□ 0.9
SCAMP4-203ENST00000411971 NOM1Q5C9Z4 860 aaKnown RBP20.69■□□□□ 0.9
SCAMP4-203ENST00000411971 VPS37DQ86XT2 251 aa20.69■□□□□ 0.9
SCAMP4-203ENST00000411971 ELP3Q9H9T3 547 aa20.69■□□□□ 0.9
SCAMP4-203ENST00000411971 PA2G4Q9UQ80 394 aaKnown RBP20.69■□□□□ 0.9
SCAMP4-203ENST00000411971 MANSC4A6NHS7 340 aaPredicted RBP20.68■□□□□ 0.9
SCAMP4-203ENST00000411971 ZBTB48P10074 688 aaPredicted RBP20.68■□□□□ 0.9
SCAMP4-203ENST00000411971 PUM3Q15397 648 aaKnown RBP20.68■□□□□ 0.9
SCAMP4-203ENST00000411971 CAVIN4Q5BKX8 364 aa20.68■□□□□ 0.9
SCAMP4-203ENST00000411971 APOBEC3HQ6NTF7 200 aaKnown RBP20.68■□□□□ 0.9
SCAMP4-203ENST00000411971 SIL1Q9H173 461 aa20.68■□□□□ 0.9
SCAMP4-203ENST00000411971 TNNQ9UQP3 1299 aa20.68■□□□□ 0.9
SCAMP4-203ENST00000411971 PDE4DIPQ5VU43 2346 aa20.67■□□□□ 0.9
SCAMP4-203ENST00000411971 FKTNO75072 461 aa20.67■□□□□ 0.9
SCAMP4-203ENST00000411971 IREB2P48200 963 aaKnown RBP20.67■□□□□ 0.9
SCAMP4-203ENST00000411971 ANKRD13AQ8IZ07 590 aa20.67■□□□□ 0.9
SCAMP4-203ENST00000411971 MEIS3Q99687 375 aa20.67■□□□□ 0.9
SCAMP4-203ENST00000411971 LRRFIP2Q9Y608 721 aaKnown RBP20.67■□□□□ 0.9
SCAMP4-203ENST00000411971 ZSWIM8A7E2V4 1837 aa20.67■□□□□ 0.9
SCAMP4-203ENST00000411971 FRAT2O75474 233 aaPredicted RBP20.66■□□□□ 0.9
SCAMP4-203ENST00000411971 RARSP54136 660 aaKnown RBP20.66■□□□□ 0.9
SCAMP4-203ENST00000411971 HDLBPQ00341 1268 aaKnown RBP20.66■□□□□ 0.9
SCAMP4-203ENST00000411971 OPTNQ96CV9 577 aa20.66■□□□□ 0.9
SCAMP4-203ENST00000411971 MS4A4AQ96JQ5 239 aa20.66■□□□□ 0.9
SCAMP4-203ENST00000411971 ZDHHC15Q96MV8 337 aa20.66■□□□□ 0.9
SCAMP4-203ENST00000411971 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.66■□□□□ 0.9
SCAMP4-203ENST00000411971 KIF16BQ96L93 1317 aa20.66■□□□□ 0.9
SCAMP4-203ENST00000411971 IFIT1P09914 478 aaKnown RBP20.65■□□□□ 0.9
SCAMP4-203ENST00000411971 UBTFL1P0CB47 393 aaPredicted RBP20.65■□□□□ 0.9
SCAMP4-203ENST00000411971 TNFAIP1Q13829 316 aa20.65■□□□□ 0.9
SCAMP4-203ENST00000411971 VGLL4Q14135 290 aa20.65■□□□□ 0.9
SCAMP4-203ENST00000411971 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.65■□□□□ 0.9
SCAMP4-203ENST00000411971 TBC1D22AQ8WUA7 517 aa20.65■□□□□ 0.9
SCAMP4-203ENST00000411971 TESPA1A2RU30 521 aaPredicted RBP20.64■□□□□ 0.89
SCAMP4-203ENST00000411971 UNCXA6NJT0 531 aa20.64■□□□□ 0.89
SCAMP4-203ENST00000411971 CRHR2Q13324 411 aa20.64■□□□□ 0.89
SCAMP4-203ENST00000411971 LPIN2Q92539 896 aa20.64■□□□□ 0.89
SCAMP4-203ENST00000411971 TEKT1Q969V4 418 aa20.64■□□□□ 0.89
SCAMP4-203ENST00000411971 AK9Q5TCS8 1911 aa20.63■□□□□ 0.89
SCAMP4-203ENST00000411971 MYH2Q9UKX2 1941 aa20.63■□□□□ 0.89
SCAMP4-203ENST00000411971 PRDX5P30044 214 aa20.63■□□□□ 0.89
SCAMP4-203ENST00000411971 ADORA1P30542 326 aa20.63■□□□□ 0.89
SCAMP4-203ENST00000411971 INHBEP58166 350 aa20.63■□□□□ 0.89
SCAMP4-203ENST00000411971 DIXDC1Q155Q3 683 aa20.63■□□□□ 0.89
SCAMP4-203ENST00000411971 BRI3BPQ8WY22 251 aa20.63■□□□□ 0.89
SCAMP4-203ENST00000411971 BRCA2P51587 3418 aa20.63■□□□□ 0.89
SCAMP4-203ENST00000411971 CCER2I3L3R5 266 aa20.62■□□□□ 0.89
SCAMP4-203ENST00000411971 SLC5A1P13866 664 aa20.62■□□□□ 0.89
SCAMP4-203ENST00000411971 PHKA1P46020 1223 aa20.62■□□□□ 0.89
SCAMP4-203ENST00000411971 FBXO46Q6PJ61 603 aaPredicted RBP20.62■□□□□ 0.89
SCAMP4-203ENST00000411971 MRIQ9BWK5 157 aa20.62■□□□□ 0.89
SCAMP4-203ENST00000411971 SNCAIPQ9Y6H5 919 aa20.62■□□□□ 0.89
SCAMP4-203ENST00000411971 MKI67P46013 3256 aaKnown RBP20.61■□□□□ 0.89
SCAMP4-203ENST00000411971 CIAO1O76071 339 aa20.61■□□□□ 0.89
SCAMP4-203ENST00000411971 ALDH1A1P00352 501 aa20.61■□□□□ 0.89
SCAMP4-203ENST00000411971 CT47B1P0C2W7 299 aaPredicted RBP20.61■□□□□ 0.89
SCAMP4-203ENST00000411971 MAP3K9P80192 1104 aa20.61■□□□□ 0.89
SCAMP4-203ENST00000411971 PKN2Q16513 984 aaKnown RBP20.61■□□□□ 0.89
SCAMP4-203ENST00000411971 ATP2B3Q16720 1220 aa20.61■□□□□ 0.89
SCAMP4-203ENST00000411971 HHIPL2Q6UWX4 724 aa20.61■□□□□ 0.89
SCAMP4-203ENST00000411971 OTOP1Q7RTM1 612 aa20.61■□□□□ 0.89
SCAMP4-203ENST00000411971 DAGLAQ9Y4D2 1042 aa20.61■□□□□ 0.89
SCAMP4-203ENST00000411971 CD99L2Q8TCZ2 262 aa20.6■□□□□ 0.89
SCAMP4-203ENST00000411971 ZKSCAN4Q969J2 545 aaPredicted RBP20.6■□□□□ 0.89
SCAMP4-203ENST00000411971 API5Q9BZZ5 524 aaKnown RBP20.6■□□□□ 0.89
SCAMP4-203ENST00000411971 TNNI2P48788 182 aa20.59■□□□□ 0.89
SCAMP4-203ENST00000411971 NFIAQ12857 509 aa20.59■□□□□ 0.89
SCAMP4-203ENST00000411971 FAM43AQ8N2R8 423 aa20.59■□□□□ 0.89
SCAMP4-203ENST00000411971 OTUD5Q96G74 571 aa20.59■□□□□ 0.89
SCAMP4-203ENST00000411971 COPRSQ9NQ92 184 aa20.59■□□□□ 0.89
SCAMP4-203ENST00000411971 SUGT1Q9Y2Z0 365 aa20.59■□□□□ 0.89
SCAMP4-203ENST00000411971 TRIM17Q9Y577 477 aa20.59■□□□□ 0.89
SCAMP4-203ENST00000411971 INTS3Q68E01 1043 aaKnown RBP20.58■□□□□ 0.89
SCAMP4-203ENST00000411971 CDC42EP5Q6NZY7 148 aa20.58■□□□□ 0.89
SCAMP4-203ENST00000411971 MIGA2Q7L4E1 593 aa20.58■□□□□ 0.89
SCAMP4-203ENST00000411971 FAM83AQ86UY5 434 aa20.58■□□□□ 0.89
SCAMP4-203ENST00000411971 ZFPM1Q8IX07 1006 aa20.58■□□□□ 0.89
SCAMP4-203ENST00000411971 WDR66Q8TBY9 1149 aa20.58■□□□□ 0.89
SCAMP4-203ENST00000411971 CEP126Q9P2H0 1117 aa20.58■□□□□ 0.89
SCAMP4-203ENST00000411971 CCL15-CCL14A0A0B4J2E2 113 aa20.57■□□□□ 0.88
SCAMP4-203ENST00000411971 SPDYE5A6NIY4 337 aa20.57■□□□□ 0.88
SCAMP4-203ENST00000411971 BCAR3O75815 825 aa20.57■□□□□ 0.88
SCAMP4-203ENST00000411971 INPP5BP32019 993 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms