RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 CTNNA3Q9UI47 895 aa6.58□□□□□ -1.36
EPHA4-202ENST00000409854 IQSEC3Q9UPP2 1182 aaPredicted RBP6.58□□□□□ -1.36
EPHA4-202ENST00000409854 CYP46A1Q9Y6A2 500 aa6.58□□□□□ -1.36
EPHA4-202ENST00000409854 SCN9AQ15858 1988 aa6.58□□□□□ -1.36
EPHA4-202ENST00000409854 RPS6KB1P23443 525 aa6.58□□□□□ -1.36
EPHA4-202ENST00000409854 AK2P54819 239 aa6.58□□□□□ -1.36
EPHA4-202ENST00000409854 PDGFDQ9GZP0 370 aaPredicted RBP6.58□□□□□ -1.36
EPHA4-202ENST00000409854 SLKQ9H2G2 1235 aaPredicted RBP6.58□□□□□ -1.36
EPHA4-202ENST00000409854 FER1L6Q2WGJ9 1857 aa6.58□□□□□ -1.36
EPHA4-202ENST00000409854 ADAMTSL1Q8N6G6 1762 aa6.58□□□□□ -1.36
EPHA4-202ENST00000409854 FGAP02671 866 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 GNAT2P19087 354 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 COL9A3Q14050 684 aaPredicted RBP6.57□□□□□ -1.36
EPHA4-202ENST00000409854 ADGRA1Q86SQ6 560 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 C2CD5Q86YS7 1000 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 ZGPATQ8N5A5 531 aaKnown RBP6.57□□□□□ -1.36
EPHA4-202ENST00000409854 INTS4Q96HW7 963 aaKnown RBP6.57□□□□□ -1.36
EPHA4-202ENST00000409854 PDRG1Q9NUG6 133 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 CHMP5Q9NZZ3 219 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 LRP2BPQ9P2M1 347 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 NSFL1CQ9UNZ2 370 aaKnown RBP6.57□□□□□ -1.36
EPHA4-202ENST00000409854 A0A0G2JLW4 131 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 CPA1P15085 419 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 BLOC1S2Q6QNY1 142 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 AIDAQ96BJ3 306 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 NSUN4Q96CB9 384 aaKnown RBP6.57□□□□□ -1.36
EPHA4-202ENST00000409854 NEK1Q96PY6 1258 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 RIOK1Q9BRS2 568 aaKnown RBP6.57□□□□□ -1.36
EPHA4-202ENST00000409854 CD209Q9NNX6 404 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 MYH1P12882 1939 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 ARFGEF1Q9Y6D6 1849 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 PATL2C9JE40 543 aaKnown RBP6.57□□□□□ -1.36
EPHA4-202ENST00000409854 E7EWF7 191 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 H0YIN7 160 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 MBD4O95243 580 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 HMGB1P09429 215 aaKnown RBP6.57□□□□□ -1.36
EPHA4-202ENST00000409854 LCORLQ8N3X6 602 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 FBXL16Q8N461 479 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 WDR66Q8TBY9 1149 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 AGXT2Q9BYV1 514 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 EPB41L4AQ9HCS5 686 aaPredicted RBP6.57□□□□□ -1.36
EPHA4-202ENST00000409854 LIMCH1Q9UPQ0 1083 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 MYH15Q9Y2K3 1946 aa6.57□□□□□ -1.36
EPHA4-202ENST00000409854 TOB2Q14106 344 aaPredicted RBP6.56□□□□□ -1.36
EPHA4-202ENST00000409854 IMMTQ16891 758 aaKnown RBP6.56□□□□□ -1.36
EPHA4-202ENST00000409854 SPTY2D1Q68D10 685 aaPredicted RBP6.56□□□□□ -1.36
EPHA4-202ENST00000409854 TTLL5Q6EMB2 1281 aa6.56□□□□□ -1.36
EPHA4-202ENST00000409854 ILDR1Q86SU0 546 aaPredicted RBP6.56□□□□□ -1.36
EPHA4-202ENST00000409854 SPRYD3Q8NCJ5 442 aa6.56□□□□□ -1.36
EPHA4-202ENST00000409854 C7orf43Q8WVR3 580 aa6.56□□□□□ -1.36
EPHA4-202ENST00000409854 GPR101Q96P66 508 aaPredicted RBP6.56□□□□□ -1.36
EPHA4-202ENST00000409854 RTFDC1Q9BY42 306 aaPredicted RBP6.56□□□□□ -1.36
EPHA4-202ENST00000409854 NBPF3Q9H094 633 aa6.56□□□□□ -1.36
EPHA4-202ENST00000409854 CWC22Q9HCG8 908 aaKnown RBP6.56□□□□□ -1.36
EPHA4-202ENST00000409854 RAI14Q9P0K7 980 aa6.56□□□□□ -1.36
EPHA4-202ENST00000409854 ABCF2Q9UG63 623 aa6.56□□□□□ -1.36
EPHA4-202ENST00000409854 FAM205AQ6ZU69 1335 aa6.56□□□□□ -1.36
EPHA4-202ENST00000409854 GSG1L2A8MUP6 293 aa6.56□□□□□ -1.36
EPHA4-202ENST00000409854 TULP1O00294 542 aaPredicted RBP6.56□□□□□ -1.36
EPHA4-202ENST00000409854 CYP7A1P22680 504 aa6.56□□□□□ -1.36
EPHA4-202ENST00000409854 EXOSC10Q01780 885 aaKnown RBP6.56□□□□□ -1.36
EPHA4-202ENST00000409854 MECOMQ03112 1051 aa6.56□□□□□ -1.36
EPHA4-202ENST00000409854 ANKRD1Q15327 319 aa6.56□□□□□ -1.36
EPHA4-202ENST00000409854 CNKSR1Q969H4 720 aa6.56□□□□□ -1.36
EPHA4-202ENST00000409854 ZSCAN31Q96LW9 406 aaPredicted RBP6.56□□□□□ -1.36
EPHA4-202ENST00000409854 ARMT1Q9H993 441 aa6.56□□□□□ -1.36
EPHA4-202ENST00000409854 WDR19Q8NEZ3 1342 aa6.56□□□□□ -1.36
EPHA4-202ENST00000409854 BRD2P25440 801 aaKnown RBP6.56□□□□□ -1.36
EPHA4-202ENST00000409854 PRDX5P30044 214 aa6.56□□□□□ -1.36
EPHA4-202ENST00000409854 NAA16Q6N069 864 aaPredicted RBP6.56□□□□□ -1.36
EPHA4-202ENST00000409854 IFNL3Q8IZI9 196 aa6.56□□□□□ -1.36
EPHA4-202ENST00000409854 MPNDQ8N594 471 aa6.56□□□□□ -1.36
EPHA4-202ENST00000409854 COA1Q9GZY4 146 aa6.56□□□□□ -1.36
EPHA4-202ENST00000409854 SH2B1Q9NRF2 756 aaPredicted RBP6.56□□□□□ -1.36
EPHA4-202ENST00000409854 MYH8P13535 1937 aa6.55□□□□□ -1.36
EPHA4-202ENST00000409854 MAGEB6P1A0A0J9YX57 407 aa6.55□□□□□ -1.36
EPHA4-202ENST00000409854 FRAT2O75474 233 aaPredicted RBP6.55□□□□□ -1.36
EPHA4-202ENST00000409854 DHX32Q7L7V1 743 aaKnown RBP6.55□□□□□ -1.36
EPHA4-202ENST00000409854 MB21D2Q8IYB1 491 aaPredicted RBP6.55□□□□□ -1.36
EPHA4-202ENST00000409854 LARGE1O95461 756 aa6.55□□□□□ -1.36
EPHA4-202ENST00000409854 HSP90AA1P07900 732 aaKnown RBP6.55□□□□□ -1.36
EPHA4-202ENST00000409854 CHRNA5P30532 468 aa6.55□□□□□ -1.36
EPHA4-202ENST00000409854 ST3GAL1Q11201 340 aa6.55□□□□□ -1.36
EPHA4-202ENST00000409854 CHAF1AQ13111 956 aaPredicted RBP6.55□□□□□ -1.36
EPHA4-202ENST00000409854 RAB3GAP1Q15042 981 aa6.55□□□□□ -1.36
EPHA4-202ENST00000409854 GIMAP6Q6P9H5 292 aa6.55□□□□□ -1.36
EPHA4-202ENST00000409854 OLFM4Q6UX06 510 aa6.55□□□□□ -1.36
EPHA4-202ENST00000409854 DPP8Q6V1X1 898 aaPredicted RBP6.55□□□□□ -1.36
EPHA4-202ENST00000409854 C6orf229H3BNL8 230 aa6.55□□□□□ -1.36
EPHA4-202ENST00000409854 ZNF213O14771 459 aa6.55□□□□□ -1.36
EPHA4-202ENST00000409854 CC2D2BQ6DHV5 1058 aa6.55□□□□□ -1.36
EPHA4-202ENST00000409854 TBC1D10CQ8IV04 446 aa6.55□□□□□ -1.36
EPHA4-202ENST00000409854 MIGA1Q8NAN2 632 aa6.55□□□□□ -1.36
EPHA4-202ENST00000409854 TBC1D22AQ8WUA7 517 aa6.55□□□□□ -1.36
EPHA4-202ENST00000409854 ZNF622Q969S3 477 aaKnown RBP eCLIP6.55□□□□□ -1.36
EPHA4-202ENST00000409854 ANAPC4Q9UJX5 808 aa6.55□□□□□ -1.36
EPHA4-202ENST00000409854 TPCN1Q9ULQ1 816 aa6.55□□□□□ -1.36
EPHA4-202ENST00000409854 SLC4A4Q9Y6R1 1079 aa6.55□□□□□ -1.36
EPHA4-202ENST00000409854 PRKAB2O43741 272 aa6.54□□□□□ -1.36
EPHA4-202ENST00000409854 LDHBP07195 334 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms