RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 FOCADQ5VW36 1801 aa17.19■□□□□ 0.34
GYPC-203ENST00000409836 GAKO14976 1311 aa17.19■□□□□ 0.34
GYPC-203ENST00000409836 RFX7Q2KHR2 1363 aa17.18■□□□□ 0.34
GYPC-203ENST00000409836 MYH7P12883 1935 aa17.18■□□□□ 0.34
GYPC-203ENST00000409836 PRDX5P30044 214 aa17.18■□□□□ 0.34
GYPC-203ENST00000409836 DLGAP5Q15398 846 aa17.18■□□□□ 0.34
GYPC-203ENST00000409836 CFAP100Q494V2 611 aa17.18■□□□□ 0.34
GYPC-203ENST00000409836 CCDC158Q5M9N0 1113 aa17.18■□□□□ 0.34
GYPC-203ENST00000409836 AACSQ86V21 672 aa17.18■□□□□ 0.34
GYPC-203ENST00000409836 APOBEC3FQ8IUX4 373 aaKnown RBP17.18■□□□□ 0.34
GYPC-203ENST00000409836 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.18■□□□□ 0.34
GYPC-203ENST00000409836 LRRCC1Q9C099 1032 aa17.18■□□□□ 0.34
GYPC-203ENST00000409836 CREBZFQ9NS37 354 aa17.18■□□□□ 0.34
GYPC-203ENST00000409836 CRKP46108 304 aa17.17■□□□□ 0.34
GYPC-203ENST00000409836 SPDYE2Q495Y8 402 aa17.17■□□□□ 0.34
GYPC-203ENST00000409836 GORABQ5T7V8 394 aa17.17■□□□□ 0.34
GYPC-203ENST00000409836 ANGEL2Q5VTE6 544 aaKnown RBP17.17■□□□□ 0.34
GYPC-203ENST00000409836 KRT26Q7Z3Y9 468 aa17.17■□□□□ 0.34
GYPC-203ENST00000409836 TEKT1Q969V4 418 aa17.17■□□□□ 0.34
GYPC-203ENST00000409836 DCPSQ96C86 337 aaKnown RBP17.17■□□□□ 0.34
GYPC-203ENST00000409836 GLIS2Q9BZE0 524 aaPredicted RBP17.17■□□□□ 0.34
GYPC-203ENST00000409836 IL1RAPL2Q9NP60 686 aa17.17■□□□□ 0.34
GYPC-203ENST00000409836 RPAP1Q9BWH6 1393 aaPredicted RBP17.16■□□□□ 0.34
GYPC-203ENST00000409836 CDK5RAP2Q96SN8 1893 aa17.16■□□□□ 0.34
GYPC-203ENST00000409836 LDHBP07195 334 aaKnown RBP17.16■□□□□ 0.34
GYPC-203ENST00000409836 TMED8Q6PL24 325 aaPredicted RBP17.16■□□□□ 0.34
GYPC-203ENST00000409836 SULF1Q8IWU6 871 aa17.16■□□□□ 0.34
GYPC-203ENST00000409836 FAM163AQ96GL9 167 aaPredicted RBP17.16■□□□□ 0.34
GYPC-203ENST00000409836 PPP2R3BQ9Y5P8 575 aa17.16■□□□□ 0.34
GYPC-203ENST00000409836 F8W031 263 aaPredicted RBP17.15■□□□□ 0.34
GYPC-203ENST00000409836 TTC39AQ5SRH9 613 aa17.15■□□□□ 0.34
GYPC-203ENST00000409836 RBM26Q5T8P6 1007 aaKnown RBP17.15■□□□□ 0.34
GYPC-203ENST00000409836 FKBP1CQ5VVH2 108 aa17.15■□□□□ 0.34
GYPC-203ENST00000409836 SPTY2D1Q68D10 685 aaPredicted RBP17.15■□□□□ 0.34
GYPC-203ENST00000409836 PI16Q6UXB8 463 aa17.15■□□□□ 0.34
GYPC-203ENST00000409836 EXOC6Q8TAG9 804 aa17.15■□□□□ 0.34
GYPC-203ENST00000409836 PRMT6Q96LA8 375 aaPredicted RBP17.15■□□□□ 0.34
GYPC-203ENST00000409836 PCDHAC2Q9Y5I4 1007 aa17.15■□□□□ 0.34
GYPC-203ENST00000409836 AOX1Q06278 1338 aa17.15■□□□□ 0.34
GYPC-203ENST00000409836 SSC5DA1L4H1 1573 aa17.15■□□□□ 0.34
GYPC-203ENST00000409836 TMEM88BA6NKF7 163 aa17.14■□□□□ 0.33
GYPC-203ENST00000409836 TRAF5O00463 557 aa17.14■□□□□ 0.33
GYPC-203ENST00000409836 APOBEC3HQ6NTF7 200 aaKnown RBP17.14■□□□□ 0.33
GYPC-203ENST00000409836 ZNF384Q8TF68 577 aa17.14■□□□□ 0.33
GYPC-203ENST00000409836 GCC1Q96CN9 775 aa17.14■□□□□ 0.33
GYPC-203ENST00000409836 CCDC8Q9H0W5 538 aaPredicted RBP17.14■□□□□ 0.33
GYPC-203ENST00000409836 DAGLAQ9Y4D2 1042 aa17.14■□□□□ 0.33
GYPC-203ENST00000409836 OTOFQ9HC10 1997 aa17.13■□□□□ 0.33
GYPC-203ENST00000409836 ADM5C9JUS6 153 aa17.13■□□□□ 0.33
GYPC-203ENST00000409836 MYO1BO43795 1136 aa17.13■□□□□ 0.33
GYPC-203ENST00000409836 CST9Q5W186 159 aa17.13■□□□□ 0.33
GYPC-203ENST00000409836 SMC5Q8IY18 1101 aa17.13■□□□□ 0.33
GYPC-203ENST00000409836 HHIPL1Q96JK4 782 aa17.13■□□□□ 0.33
GYPC-203ENST00000409836 SALL3Q9BXA9 1300 aa17.13■□□□□ 0.33
GYPC-203ENST00000409836 COL2A1P02458 1487 aaPredicted RBP17.12■□□□□ 0.33
GYPC-203ENST00000409836 RASSF10A6NK89 507 aa17.12■□□□□ 0.33
GYPC-203ENST00000409836 CYP2E1P05181 493 aaPredicted RBP17.12■□□□□ 0.33
GYPC-203ENST00000409836 IFIT2P09913 472 aaKnown RBP17.12■□□□□ 0.33
GYPC-203ENST00000409836 TNFAIP1Q13829 316 aa17.12■□□□□ 0.33
GYPC-203ENST00000409836 USP48Q86UV5 1035 aa17.12■□□□□ 0.33
GYPC-203ENST00000409836 NSUN4Q96CB9 384 aaKnown RBP17.12■□□□□ 0.33
GYPC-203ENST00000409836 CDCA5Q96FF9 252 aa17.12■□□□□ 0.33
GYPC-203ENST00000409836 MROH7-TTC4A0A0A0MT08 1334 aa17.12■□□□□ 0.33
GYPC-203ENST00000409836 DDX60LQ5H9U9 1706 aaKnown RBP17.12■□□□□ 0.33
GYPC-203ENST00000409836 CNTNAP1P78357 1384 aa17.12■□□□□ 0.33
GYPC-203ENST00000409836 ATP5JP18859 108 aa17.11■□□□□ 0.33
GYPC-203ENST00000409836 FKBP1BP68106 108 aa17.11■□□□□ 0.33
GYPC-203ENST00000409836 MECOMQ03112 1051 aa17.11■□□□□ 0.33
GYPC-203ENST00000409836 FMR1Q06787 632 aaKnown RBP eCLIP17.11■□□□□ 0.33
GYPC-203ENST00000409836 DIXDC1Q155Q3 683 aa17.11■□□□□ 0.33
GYPC-203ENST00000409836 SLF2Q8IX21 1173 aa17.11■□□□□ 0.33
GYPC-203ENST00000409836 DNAJC5GQ8N7S2 189 aa17.11■□□□□ 0.33
GYPC-203ENST00000409836 ZNF70Q9UC06 446 aaPredicted RBP17.11■□□□□ 0.33
GYPC-203ENST00000409836 MAP4K4O95819 1239 aaPredicted RBP17.1■□□□□ 0.33
GYPC-203ENST00000409836 ZAP70P43403 619 aa17.1■□□□□ 0.33
GYPC-203ENST00000409836 ERICH6Q7L0X2 663 aa17.1■□□□□ 0.33
GYPC-203ENST00000409836 FAM83AQ86UY5 434 aa17.1■□□□□ 0.33
GYPC-203ENST00000409836 DZIP1Q86YF9 867 aaKnown RBP17.1■□□□□ 0.33
GYPC-203ENST00000409836 TLL2Q9Y6L7 1015 aa17.1■□□□□ 0.33
GYPC-203ENST00000409836 APBB1O00213 710 aa17.09■□□□□ 0.33
GYPC-203ENST00000409836 CELF2O95319 508 aaKnown RBP17.09■□□□□ 0.33
GYPC-203ENST00000409836 SAPCD2Q86UD0 394 aa17.09■□□□□ 0.33
GYPC-203ENST00000409836 DEFB129Q9H1M3 183 aa17.09■□□□□ 0.33
GYPC-203ENST00000409836 TDRD3Q9H7E2 651 aaKnown RBP17.09■□□□□ 0.33
GYPC-203ENST00000409836 ABCF2Q9UG63 623 aa17.09■□□□□ 0.33
GYPC-203ENST00000409836 TTC41PQ6P2S7 1318 aa17.08■□□□□ 0.32
GYPC-203ENST00000409836 GPR75-ASB3A0A0A6YYF3 556 aa17.08■□□□□ 0.32
GYPC-203ENST00000409836 CLRN2A0PK11 232 aa17.08■□□□□ 0.32
GYPC-203ENST00000409836 NPM3O75607 178 aaKnown RBP17.08■□□□□ 0.32
GYPC-203ENST00000409836 RBM5P52756 815 aaKnown RBP eCLIP17.08■□□□□ 0.32
GYPC-203ENST00000409836 GSTO1P78417 241 aa17.08■□□□□ 0.32
GYPC-203ENST00000409836 TBC1D9Q6ZT07 1266 aa17.08■□□□□ 0.32
GYPC-203ENST00000409836 TEPSINQ96N21 525 aa17.08■□□□□ 0.32
GYPC-203ENST00000409836 HAUS7Q99871 368 aa17.08■□□□□ 0.32
GYPC-203ENST00000409836 IDI2Q9BXS1 227 aa17.08■□□□□ 0.32
GYPC-203ENST00000409836 PIH1D3Q9NQM4 214 aaKnown RBP17.08■□□□□ 0.32
GYPC-203ENST00000409836 SMARCA5O60264 1052 aaPredicted RBP17.07■□□□□ 0.32
GYPC-203ENST00000409836 TTF1Q15361 905 aaPredicted RBP17.07■□□□□ 0.32
GYPC-203ENST00000409836 CDC42EP5Q6NZY7 148 aa17.07■□□□□ 0.32
GYPC-203ENST00000409836 RWDD1Q9H446 243 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms