RNA–Protein interactions for RNA: ENST00000409681.1

POLR1A-203, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5 BASIC

Gene POLR1A, Length 6,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-203ENST00000409681 ARPP21Q9UBL0 812 aaPredicted RBP11.68□□□□□ -0.54
POLR1A-203ENST00000409681 CD163L1Q9NR16 1453 aa11.68□□□□□ -0.54
POLR1A-203ENST00000409681 PRPF40AO75400 957 aaKnown RBP11.67□□□□□ -0.54
POLR1A-203ENST00000409681 NAPAP54920 295 aa11.67□□□□□ -0.54
POLR1A-203ENST00000409681 MARCH10Q8NA82 808 aaPredicted RBP11.67□□□□□ -0.54
POLR1A-203ENST00000409681 STXBP4Q6ZWJ1 553 aa11.67□□□□□ -0.54
POLR1A-203ENST00000409681 PNMA6EA0A0J9YXQ4 647 aa11.67□□□□□ -0.54
POLR1A-203ENST00000409681 SUPT20HL1Q3ZLR7 823 aa11.67□□□□□ -0.54
POLR1A-203ENST00000409681 CIAPIN1Q6FI81 312 aa11.67□□□□□ -0.54
POLR1A-203ENST00000409681 GOPCQ9HD26 462 aa11.67□□□□□ -0.54
POLR1A-203ENST00000409681 SAMM50Q9Y512 469 aa11.67□□□□□ -0.54
POLR1A-203ENST00000409681 BCORL1Q5H9F3 1711 aa11.67□□□□□ -0.54
POLR1A-203ENST00000409681 GNA11P29992 359 aa11.67□□□□□ -0.54
POLR1A-203ENST00000409681 HEATR3Q7Z4Q2 680 aa11.67□□□□□ -0.54
POLR1A-203ENST00000409681 ZAP70P43403 619 aa11.67□□□□□ -0.54
POLR1A-203ENST00000409681 AMPD3Q01432 767 aa11.67□□□□□ -0.54
POLR1A-203ENST00000409681 GYG1P46976 350 aa11.67□□□□□ -0.54
POLR1A-203ENST00000409681 BRDTQ58F21 947 aaPredicted RBP11.67□□□□□ -0.54
POLR1A-203ENST00000409681 VTI1AQ96AJ9 217 aa11.67□□□□□ -0.54
POLR1A-203ENST00000409681 PNMA2Q9UL42 364 aa11.67□□□□□ -0.54
POLR1A-203ENST00000409681 GPAA1O43292 621 aa11.66□□□□□ -0.54
POLR1A-203ENST00000409681 RBM25P49756 843 aaKnown RBP11.66□□□□□ -0.54
POLR1A-203ENST00000409681 SUSD4Q5VX71 490 aa11.66□□□□□ -0.54
POLR1A-203ENST00000409681 CCDC102BQ68D86 513 aa11.66□□□□□ -0.54
POLR1A-203ENST00000409681 KIAA0825Q8IV33 1275 aa11.66□□□□□ -0.54
POLR1A-203ENST00000409681 TMEM87BQ96K49 555 aa11.66□□□□□ -0.54
POLR1A-203ENST00000409681 GRIN3BO60391 1043 aa11.66□□□□□ -0.54
POLR1A-203ENST00000409681 ZBED4O75132 1171 aa11.66□□□□□ -0.54
POLR1A-203ENST00000409681 TNMDQ9H2S6 317 aa11.66□□□□□ -0.54
POLR1A-203ENST00000409681 IRX3P78415 501 aaPredicted RBP11.66□□□□□ -0.54
POLR1A-203ENST00000409681 DHX8Q14562 1220 aaKnown RBP11.66□□□□□ -0.54
POLR1A-203ENST00000409681 KIF22Q14807 665 aa11.66□□□□□ -0.54
POLR1A-203ENST00000409681 COA1Q9GZY4 146 aa11.66□□□□□ -0.54
POLR1A-203ENST00000409681 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.66□□□□□ -0.54
POLR1A-203ENST00000409681 BSDC1Q9NW68 430 aaPredicted RBP11.66□□□□□ -0.54
POLR1A-203ENST00000409681 CCDC70Q6NSX1 233 aa11.66□□□□□ -0.54
POLR1A-203ENST00000409681 DHX32Q7L7V1 743 aaKnown RBP11.66□□□□□ -0.54
POLR1A-203ENST00000409681 SMARCE1Q969G3 411 aa11.66□□□□□ -0.54
POLR1A-203ENST00000409681 TANGO6Q9C0B7 1094 aa11.66□□□□□ -0.54
POLR1A-203ENST00000409681 PDCL3Q9H2J4 239 aa11.66□□□□□ -0.54
POLR1A-203ENST00000409681 SLC5A4Q9NY91 659 aa11.66□□□□□ -0.54
POLR1A-203ENST00000409681 PRAMEF22A3QJZ6 481 aa11.65□□□□□ -0.54
POLR1A-203ENST00000409681 CHMLP26374 656 aa11.65□□□□□ -0.54
POLR1A-203ENST00000409681 BRIP1Q9BX63 1249 aa11.65□□□□□ -0.54
POLR1A-203ENST00000409681 MYO3BQ8WXR4 1341 aa11.65□□□□□ -0.54
POLR1A-203ENST00000409681 ZNF532Q9HCE3 1301 aa11.65□□□□□ -0.54
POLR1A-203ENST00000409681 KRI1Q8N9T8 703 aaKnown RBP11.65□□□□□ -0.54
POLR1A-203ENST00000409681 TCP10Q12799 353 aa11.65□□□□□ -0.54
POLR1A-203ENST00000409681 MAPKAPK5Q8IW41 473 aa11.65□□□□□ -0.54
POLR1A-203ENST00000409681 TGFBRAP1Q8WUH2 860 aa11.65□□□□□ -0.54
POLR1A-203ENST00000409681 R3HDM1Q15032 1099 aaKnown RBP11.65□□□□□ -0.55
POLR1A-203ENST00000409681 CCDC192P0DO97 292 aa11.64□□□□□ -0.55
POLR1A-203ENST00000409681 CREB3L3Q68CJ9 461 aa11.64□□□□□ -0.55
POLR1A-203ENST00000409681 TSG101Q99816 390 aa11.64□□□□□ -0.55
POLR1A-203ENST00000409681 BCAMP50895 628 aa11.64□□□□□ -0.55
POLR1A-203ENST00000409681 PPP2R5BQ15173 497 aa11.64□□□□□ -0.55
POLR1A-203ENST00000409681 Q6ZUG5 572 aa11.64□□□□□ -0.55
POLR1A-203ENST00000409681 PRM3Q9NNZ6 103 aa11.64□□□□□ -0.55
POLR1A-203ENST00000409681 PRKG1Q13976 671 aa11.64□□□□□ -0.55
POLR1A-203ENST00000409681 TMED8Q6PL24 325 aaPredicted RBP11.64□□□□□ -0.55
POLR1A-203ENST00000409681 LZTS2Q9BRK4 669 aa11.64□□□□□ -0.55
POLR1A-203ENST00000409681 ARMC9Q7Z3E5 817 aa11.64□□□□□ -0.55
POLR1A-203ENST00000409681 TMEM87AQ8NBN3 555 aa11.64□□□□□ -0.55
POLR1A-203ENST00000409681 ALG1Q9BT22 464 aa11.64□□□□□ -0.55
POLR1A-203ENST00000409681 ZSCAN16Q9H4T2 348 aaPredicted RBP11.64□□□□□ -0.55
POLR1A-203ENST00000409681 IQGAP1P46940 1657 aa11.64□□□□□ -0.55
POLR1A-203ENST00000409681 USP17L3A6NCW0 530 aa11.64□□□□□ -0.55
POLR1A-203ENST00000409681 USP17L4A6NCW7 530 aa11.64□□□□□ -0.55
POLR1A-203ENST00000409681 UBA7P41226 1012 aa11.64□□□□□ -0.55
POLR1A-203ENST00000409681 PDE4CQ08493 712 aa11.64□□□□□ -0.55
POLR1A-203ENST00000409681 USP17L1Q7RTZ2 530 aa11.64□□□□□ -0.55
POLR1A-203ENST00000409681 CDHR2Q9BYE9 1310 aa11.63□□□□□ -0.55
POLR1A-203ENST00000409681 DESP17661 470 aa11.63□□□□□ -0.55
POLR1A-203ENST00000409681 HSP90AA2PQ14568 343 aaPredicted RBP11.63□□□□□ -0.55
POLR1A-203ENST00000409681 SMCR8Q8TEV9 937 aaPredicted RBP11.63□□□□□ -0.55
POLR1A-203ENST00000409681 ZNHIT6Q9NWK9 470 aaKnown RBP11.63□□□□□ -0.55
POLR1A-203ENST00000409681 FGFR1OPO95684 399 aaKnown RBP11.63□□□□□ -0.55
POLR1A-203ENST00000409681 FERMT3Q86UX7 667 aa11.63□□□□□ -0.55
POLR1A-203ENST00000409681 CKAP2LQ8IYA6 745 aa11.63□□□□□ -0.55
POLR1A-203ENST00000409681 LUC7LQ9NQ29 371 aaKnown RBP11.63□□□□□ -0.55
POLR1A-203ENST00000409681 H7C1W4 665 aa11.63□□□□□ -0.55
POLR1A-203ENST00000409681 C21orf2O43822 256 aa11.63□□□□□ -0.55
POLR1A-203ENST00000409681 GUCY1B3Q02153 619 aa11.63□□□□□ -0.55
POLR1A-203ENST00000409681 LRRC24Q50LG9 513 aa11.63□□□□□ -0.55
POLR1A-203ENST00000409681 PSDA5PKW4 1024 aaPredicted RBP11.63□□□□□ -0.55
POLR1A-203ENST00000409681 PATL2C9JE40 543 aaKnown RBP11.63□□□□□ -0.55
POLR1A-203ENST00000409681 TXLNBQ8N3L3 684 aa11.63□□□□□ -0.55
POLR1A-203ENST00000409681 GJB2P29033 226 aa11.62□□□□□ -0.55
POLR1A-203ENST00000409681 SLC1A4P43007 532 aa11.62□□□□□ -0.55
POLR1A-203ENST00000409681 BTDP43251 543 aa11.62□□□□□ -0.55
POLR1A-203ENST00000409681 TNPO1Q92973 898 aaKnown RBP11.62□□□□□ -0.55
POLR1A-203ENST00000409681 MROH2AA6NES4 1674 aa11.62□□□□□ -0.55
POLR1A-203ENST00000409681 SEC31BQ9NQW1 1179 aa11.62□□□□□ -0.55
POLR1A-203ENST00000409681 CNTNAP4Q9C0A0 1308 aa11.62□□□□□ -0.55
POLR1A-203ENST00000409681 IQSEC2Q5JU85 1478 aa11.62□□□□□ -0.55
POLR1A-203ENST00000409681 NAP1L1P55209 391 aaKnown RBP11.62□□□□□ -0.55
POLR1A-203ENST00000409681 NKX1-1Q15270 411 aaPredicted RBP11.62□□□□□ -0.55
POLR1A-203ENST00000409681 CHURC1Q8WUH1 139 aa11.62□□□□□ -0.55
POLR1A-203ENST00000409681 SCNN1DP51172 638 aa11.62□□□□□ -0.55
POLR1A-203ENST00000409681 TBC1D9BQ66K14 1250 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms