RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 NCBP1Q09161 790 aaKnown RBP13.07□□□□□ -0.32
ITGA6-203ENST00000409532 LRRFIP1Q32MZ4 808 aaKnown RBP13.07□□□□□ -0.32
ITGA6-203ENST00000409532 NFXL1Q6ZNB6 911 aa13.07□□□□□ -0.32
ITGA6-203ENST00000409532 CYB5R4Q7L1T6 521 aa13.07□□□□□ -0.32
ITGA6-203ENST00000409532 MRFAP1L1Q96HT8 127 aa13.07□□□□□ -0.32
ITGA6-203ENST00000409532 TOMM22Q9NS69 142 aa13.07□□□□□ -0.32
ITGA6-203ENST00000409532 KIAA1468Q9P260 1216 aa13.07□□□□□ -0.32
ITGA6-203ENST00000409532 TMC6Q7Z403 805 aa13.07□□□□□ -0.32
ITGA6-203ENST00000409532 TBC1D10CQ8IV04 446 aa13.07□□□□□ -0.32
ITGA6-203ENST00000409532 ALG1Q9BT22 464 aa13.07□□□□□ -0.32
ITGA6-203ENST00000409532 XPO4Q9C0E2 1151 aaKnown RBP13.07□□□□□ -0.32
ITGA6-203ENST00000409532 NAT10Q9H0A0 1025 aaKnown RBP13.07□□□□□ -0.32
ITGA6-203ENST00000409532 COL18A1P39060 1754 aa13.07□□□□□ -0.32
ITGA6-203ENST00000409532 PTPN14Q15678 1187 aa13.06□□□□□ -0.32
ITGA6-203ENST00000409532 SPECC1Q5M775 1068 aa13.06□□□□□ -0.32
ITGA6-203ENST00000409532 PIH1D3Q9NQM4 214 aaKnown RBP13.06□□□□□ -0.32
ITGA6-203ENST00000409532 TBC1D2BQ9UPU7 963 aa13.06□□□□□ -0.32
ITGA6-203ENST00000409532 ZNF142P52746 1687 aaPredicted RBP13.06□□□□□ -0.32
ITGA6-203ENST00000409532 SMTNL1A8MU46 457 aa13.06□□□□□ -0.32
ITGA6-203ENST00000409532 WDHD1O75717 1129 aaPredicted RBP13.06□□□□□ -0.32
ITGA6-203ENST00000409532 ZFYP08048 801 aaPredicted RBP13.06□□□□□ -0.32
ITGA6-203ENST00000409532 PHKA1P46020 1223 aa13.06□□□□□ -0.32
ITGA6-203ENST00000409532 RRP12Q5JTH9 1297 aaKnown RBP13.06□□□□□ -0.32
ITGA6-203ENST00000409532 ANO1Q5XXA6 986 aa13.06□□□□□ -0.32
ITGA6-203ENST00000409532 SARM1Q6SZW1 724 aa13.06□□□□□ -0.32
ITGA6-203ENST00000409532 BRINP3Q76B58 766 aa13.06□□□□□ -0.32
ITGA6-203ENST00000409532 CLIC6Q96NY7 704 aa13.06□□□□□ -0.32
ITGA6-203ENST00000409532 ZHX1Q9UKY1 873 aaPredicted RBP13.06□□□□□ -0.32
ITGA6-203ENST00000409532 PFKFB1P16118 471 aa13.06□□□□□ -0.32
ITGA6-203ENST00000409532 METAP2P50579 478 aaKnown RBP eCLIP13.06□□□□□ -0.32
ITGA6-203ENST00000409532 TRMT112Q9UI30 125 aaKnown RBP13.06□□□□□ -0.32
ITGA6-203ENST00000409532 WWC3Q9ULE0 1092 aa13.06□□□□□ -0.32
ITGA6-203ENST00000409532 KIF1AQ12756 1690 aa13.06□□□□□ -0.32
ITGA6-203ENST00000409532 KIF23Q02241 960 aaPredicted RBP13.05□□□□□ -0.32
ITGA6-203ENST00000409532 KCNG4Q8TDN1 519 aa13.05□□□□□ -0.32
ITGA6-203ENST00000409532 PIGBQ92521 554 aa13.05□□□□□ -0.32
ITGA6-203ENST00000409532 NBPF3Q9H094 633 aa13.05□□□□□ -0.32
ITGA6-203ENST00000409532 ATG3Q9NT62 314 aa13.05□□□□□ -0.32
ITGA6-203ENST00000409532 ZNF532Q9HCE3 1301 aa13.05□□□□□ -0.32
ITGA6-203ENST00000409532 ATP2B1P20020 1258 aa13.05□□□□□ -0.32
ITGA6-203ENST00000409532 CDC27P30260 824 aa13.05□□□□□ -0.32
ITGA6-203ENST00000409532 CCZ1BP86790 482 aa13.05□□□□□ -0.32
ITGA6-203ENST00000409532 CCZ1P86791 482 aaPredicted RBP13.05□□□□□ -0.32
ITGA6-203ENST00000409532 ATL3Q6DD88 541 aa13.05□□□□□ -0.32
ITGA6-203ENST00000409532 ZBTB38Q8NAP3 1195 aaPredicted RBP13.05□□□□□ -0.32
ITGA6-203ENST00000409532 ZKSCAN3Q9BRR0 538 aa13.05□□□□□ -0.32
ITGA6-203ENST00000409532 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.05□□□□□ -0.32
ITGA6-203ENST00000409532 PCCAP05165 728 aaPredicted RBP13.05□□□□□ -0.32
ITGA6-203ENST00000409532 ATP1A3P13637 1013 aa13.05□□□□□ -0.32
ITGA6-203ENST00000409532 CTDSPL2Q05D32 466 aa13.05□□□□□ -0.32
ITGA6-203ENST00000409532 NBPF11Q86T75 865 aa13.05□□□□□ -0.32
ITGA6-203ENST00000409532 TTLL11Q8NHH1 800 aa13.05□□□□□ -0.32
ITGA6-203ENST00000409532 MROH7-TTC4A0A0A0MT08 1334 aa13.05□□□□□ -0.32
ITGA6-203ENST00000409532 CTIFO43310 598 aaKnown RBP13.04□□□□□ -0.32
ITGA6-203ENST00000409532 CDC25BP30305 580 aa13.04□□□□□ -0.32
ITGA6-203ENST00000409532 VPS37DQ86XT2 251 aa13.04□□□□□ -0.32
ITGA6-203ENST00000409532 CMTR1Q8N1G2 835 aaKnown RBP13.04□□□□□ -0.32
ITGA6-203ENST00000409532 IRS4O14654 1257 aaPredicted RBP13.04□□□□□ -0.32
ITGA6-203ENST00000409532 KRT40Q6A162 431 aa13.04□□□□□ -0.32
ITGA6-203ENST00000409532 ANGEL1Q9UNK9 670 aaKnown RBP13.04□□□□□ -0.32
ITGA6-203ENST00000409532 RIPOR2Q9Y4F9 1068 aa13.04□□□□□ -0.32
ITGA6-203ENST00000409532 ANKRD18BA2A2Z9 1011 aa13.04□□□□□ -0.32
ITGA6-203ENST00000409532 GOLGA8FQ08AF8 430 aa13.04□□□□□ -0.32
ITGA6-203ENST00000409532 GOLGA8DPQ0D2H9 430 aa13.04□□□□□ -0.32
ITGA6-203ENST00000409532 ANKRD7Q92527 254 aa13.04□□□□□ -0.32
ITGA6-203ENST00000409532 POLR3EQ9NVU0 708 aa13.04□□□□□ -0.32
ITGA6-203ENST00000409532 ZNF215Q9UL58 517 aaPredicted RBP13.04□□□□□ -0.32
ITGA6-203ENST00000409532 ADD2P35612 726 aa13.03□□□□□ -0.32
ITGA6-203ENST00000409532 EVCP57679 992 aa13.03□□□□□ -0.32
ITGA6-203ENST00000409532 PNOCQ13519 176 aa13.03□□□□□ -0.32
ITGA6-203ENST00000409532 AXDND1Q5T1B0 1012 aaPredicted RBP13.03□□□□□ -0.32
ITGA6-203ENST00000409532 AIDAQ96BJ3 306 aa13.03□□□□□ -0.32
ITGA6-203ENST00000409532 LMTK3Q96Q04 1460 aa13.03□□□□□ -0.32
ITGA6-203ENST00000409532 GLI3P10071 1580 aa13.03□□□□□ -0.32
ITGA6-203ENST00000409532 A0A1W2PQ27 194 aa13.03□□□□□ -0.32
ITGA6-203ENST00000409532 A0A1W2PQ64 194 aa13.03□□□□□ -0.32
ITGA6-203ENST00000409532 A0A1W2PQD8 194 aa13.03□□□□□ -0.32
ITGA6-203ENST00000409532 YEATS4O95619 227 aa13.03□□□□□ -0.32
ITGA6-203ENST00000409532 SYKP43405 635 aa13.03□□□□□ -0.32
ITGA6-203ENST00000409532 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.03□□□□□ -0.32
ITGA6-203ENST00000409532 TJP1Q07157 1748 aa13.03□□□□□ -0.32
ITGA6-203ENST00000409532 STARD3NLO95772 234 aa13.02□□□□□ -0.32
ITGA6-203ENST00000409532 CCDC102BQ68D86 513 aa13.02□□□□□ -0.32
ITGA6-203ENST00000409532 BRAPQ7Z569 592 aa13.02□□□□□ -0.32
ITGA6-203ENST00000409532 NLRP10Q86W26 655 aa13.02□□□□□ -0.32
ITGA6-203ENST00000409532 SLC26A6Q9BXS9 759 aa13.02□□□□□ -0.32
ITGA6-203ENST00000409532 IQSEC3Q9UPP2 1182 aaPredicted RBP13.02□□□□□ -0.32
ITGA6-203ENST00000409532 PAXBP1Q9Y5B6 917 aa13.02□□□□□ -0.32
ITGA6-203ENST00000409532 NEDD4P46934 1319 aa13.02□□□□□ -0.32
ITGA6-203ENST00000409532 MYH15Q9Y2K3 1946 aa13.02□□□□□ -0.32
ITGA6-203ENST00000409532 NWD2Q9ULI1 1742 aa13.02□□□□□ -0.32
ITGA6-203ENST00000409532 CSF1RP07333 972 aa13.02□□□□□ -0.32
ITGA6-203ENST00000409532 TMEM67Q5HYA8 995 aa13.02□□□□□ -0.32
ITGA6-203ENST00000409532 APOA5Q6Q788 366 aa13.02□□□□□ -0.32
ITGA6-203ENST00000409532 CCAR2Q8N163 923 aaKnown RBP13.02□□□□□ -0.32
ITGA6-203ENST00000409532 CHMP4CQ96CF2 233 aa13.02□□□□□ -0.32
ITGA6-203ENST00000409532 DNAJC5Q9H3Z4 198 aa13.02□□□□□ -0.32
ITGA6-203ENST00000409532 ZBTB1Q9Y2K1 713 aa13.02□□□□□ -0.32
ITGA6-203ENST00000409532 GOLGA8AA7E2F4 631 aa13.02□□□□□ -0.33
ITGA6-203ENST00000409532 PDE6AP16499 860 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms