RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 ERCC3P19447 782 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 RRS1Q15050 365 aaKnown RBP6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 TUBB8Q3ZCM7 444 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 KCNV1Q6PIU1 500 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 EGFL6Q8IUX8 553 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 HSD3B7Q9H2F3 369 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 ZSWIM4Q9H7M6 989 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 MED23Q9ULK4 1368 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 CTAGE9A4FU28 777 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 PRPF6O94906 941 aaKnown RBP6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 VSNL1P62760 191 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 SCRN1Q12765 414 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 STK38Q15208 465 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 ARHGEF25Q86VW2 580 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 NME9Q86XW9 330 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 DHX37Q8IY37 1157 aaKnown RBP6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 PLEKHA4Q9H4M7 779 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 BIN1O00499 593 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 ALDH1L1O75891 902 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 ZNF202O95125 648 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 HMGB1P09429 215 aaKnown RBP6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 EIF4A2Q14240 407 aaKnown RBP6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 SPECC1LQ69YQ0 1117 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 Q6ZUG5 572 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 PDILTQ8N807 584 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 NSUN7Q8NE18 718 aaKnown RBP6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 FAM76AQ8TAV0 307 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 DPF2Q92785 391 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 FAM227BQ96M60 508 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 MIS18AQ9NYP9 233 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 KIDINS220Q9ULH0 1771 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 NEDD4P46934 1319 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 CDHR2Q9BYE9 1310 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 LRRIQ3A6PVS8 624 aaPredicted RBP6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 SYF2O95926 243 aaKnown RBP6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 USPL1Q5W0Q7 1092 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 WWC2Q6AWC2 1192 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 LINC00301Q8NCQ3 95 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 POLR3EQ9NVU0 708 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 TUBE1Q9UJT0 475 aa6.67□□□□□ -1.34
R3HDM1-202ENST00000409478 PTPDC1A2A3K4 754 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 PATL2C9JE40 543 aaKnown RBP6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 RHOXF2BP0C7M4 288 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 GPTP24298 496 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 CCT5P48643 541 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 NBPF20Q3BBV1 942 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 TC2NQ8N9U0 490 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 CCDC148Q8NFR7 591 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 RHOXF2Q9BQY4 288 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 SUGCTQ9HAC7 445 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 NEO1Q92859 1461 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 CHUKO15111 745 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 NF2P35240 595 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 MTX1Q13505 466 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 KARSQ15046 597 aaKnown RBP6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 PLEKHO1Q53GL0 409 aaPredicted RBP6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 FBXW10Q5XX13 1052 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 B4GALNT4Q76KP1 1039 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 AMOTL1Q8IY63 956 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 PANX2Q96RD6 677 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 SIL1Q9H173 461 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 MYO1AQ9UBC5 1043 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 CACNA1FO60840 1977 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 SPTLC2O15270 562 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 CMA1P23946 247 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 ELF1P32519 619 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 PPFIA1Q13136 1202 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 IGSF22Q8N9C0 903 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 MIEF2Q96C03 454 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 JPH2Q9BR39 696 aaPredicted RBP6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 FSD1Q9BTV5 496 aa6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 CEP170BQ9Y4F5 1589 aaPredicted RBP6.66□□□□□ -1.34
R3HDM1-202ENST00000409478 TMEM232C9JQI7 657 aa6.65□□□□□ -1.34
R3HDM1-202ENST00000409478 H0YHG0 523 aa6.65□□□□□ -1.34
R3HDM1-202ENST00000409478 KIAA0754O94854 1291 aa6.65□□□□□ -1.34
R3HDM1-202ENST00000409478 AMPHP49418 695 aa6.65□□□□□ -1.34
R3HDM1-202ENST00000409478 GOLGA8FQ08AF8 430 aa6.65□□□□□ -1.34
R3HDM1-202ENST00000409478 GOLGA8DPQ0D2H9 430 aa6.65□□□□□ -1.34
R3HDM1-202ENST00000409478 FMNL3Q8IVF7 1028 aa6.65□□□□□ -1.34
R3HDM1-202ENST00000409478 NAPGQ99747 312 aaPredicted RBP6.65□□□□□ -1.34
R3HDM1-202ENST00000409478 VEZTQ9HBM0 779 aa6.65□□□□□ -1.34
R3HDM1-202ENST00000409478 HPCAL4Q9UM19 191 aa6.65□□□□□ -1.34
R3HDM1-202ENST00000409478 U3KPZ7 1027 aaPredicted RBP6.65□□□□□ -1.34
R3HDM1-202ENST00000409478 SPATA31D1Q6ZQQ2 1576 aa6.65□□□□□ -1.34
R3HDM1-202ENST00000409478 A0A0D9SFI3 127 aa6.65□□□□□ -1.34
R3HDM1-202ENST00000409478 ARHGAP25P42331 645 aa6.65□□□□□ -1.34
R3HDM1-202ENST00000409478 COL9A3Q14050 684 aaPredicted RBP6.65□□□□□ -1.34
R3HDM1-202ENST00000409478 C19orf44Q9H6X5 657 aa6.65□□□□□ -1.34
R3HDM1-202ENST00000409478 MRPL44Q9H9J2 332 aaKnown RBP6.65□□□□□ -1.34
R3HDM1-202ENST00000409478 BABAM1Q9NWV8 329 aa6.65□□□□□ -1.34
R3HDM1-202ENST00000409478 MCM8Q9UJA3 840 aa6.65□□□□□ -1.34
R3HDM1-202ENST00000409478 TTF2Q9UNY4 1162 aaKnown RBP6.65□□□□□ -1.34
R3HDM1-202ENST00000409478 SALL1Q9NSC2 1324 aa6.65□□□□□ -1.34
R3HDM1-202ENST00000409478 FSBPO95073 299 aa6.65□□□□□ -1.35
R3HDM1-202ENST00000409478 GCFC2P16383 781 aaKnown RBP6.65□□□□□ -1.35
R3HDM1-202ENST00000409478 STIM1Q13586 685 aa6.65□□□□□ -1.35
R3HDM1-202ENST00000409478 ISM2Q6H9L7 571 aa6.65□□□□□ -1.35
R3HDM1-202ENST00000409478 BRAPQ7Z569 592 aa6.65□□□□□ -1.35
R3HDM1-202ENST00000409478 ILDR1Q86SU0 546 aaPredicted RBP6.65□□□□□ -1.35
R3HDM1-202ENST00000409478 C14orf37Q86TY3 774 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms