RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 FGAP02671 866 aa7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 PDCP20941 246 aa7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 BCAMP50895 628 aa7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 FGD1P98174 961 aa7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 EXOSC10Q01780 885 aaKnown RBP7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 SLFNL1Q499Z3 407 aa7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 ZNF772Q68DY9 489 aaPredicted RBP7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 MCTP1Q6DN14 999 aa7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 PI16Q6UXB8 463 aa7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 LARP6Q9BRS8 491 aaKnown RBP7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 PUS7LQ9H0K6 701 aaKnown RBP7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 THSD7AQ9UPZ6 1657 aa7.43□□□□□ -1.22
GTF3C3-202ENST00000409364 MYH14Q7Z406 1995 aaKnown RBP7.43□□□□□ -1.22
GTF3C3-202ENST00000409364 E7EWF7 191 aa7.43□□□□□ -1.22
GTF3C3-202ENST00000409364 ZNF213O14771 459 aa7.43□□□□□ -1.22
GTF3C3-202ENST00000409364 GPAA1O43292 621 aa7.43□□□□□ -1.22
GTF3C3-202ENST00000409364 PDE6AP16499 860 aa7.43□□□□□ -1.22
GTF3C3-202ENST00000409364 RBM6P78332 1123 aaKnown RBP7.43□□□□□ -1.22
GTF3C3-202ENST00000409364 RASGRF1Q13972 1273 aa7.43□□□□□ -1.22
GTF3C3-202ENST00000409364 TOB2Q14106 344 aaPredicted RBP7.43□□□□□ -1.22
GTF3C3-202ENST00000409364 ALX1Q15699 326 aa7.43□□□□□ -1.22
GTF3C3-202ENST00000409364 SMIM5Q71RC9 77 aa7.43□□□□□ -1.22
GTF3C3-202ENST00000409364 CCDC83Q8IWF9 413 aa7.43□□□□□ -1.22
GTF3C3-202ENST00000409364 FBXL16Q8N461 479 aa7.43□□□□□ -1.22
GTF3C3-202ENST00000409364 PIH1D3Q9NQM4 214 aaKnown RBP7.43□□□□□ -1.22
GTF3C3-202ENST00000409364 LRRC4BQ9NT99 713 aa7.43□□□□□ -1.22
GTF3C3-202ENST00000409364 TAF6LQ9Y6J9 622 aa7.43□□□□□ -1.22
GTF3C3-202ENST00000409364 AK9Q5TCS8 1911 aa7.43□□□□□ -1.22
GTF3C3-202ENST00000409364 ZNF532Q9HCE3 1301 aa7.43□□□□□ -1.22
GTF3C3-202ENST00000409364 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.42□□□□□ -1.22
GTF3C3-202ENST00000409364 SNAP23O00161 211 aa7.42□□□□□ -1.22
GTF3C3-202ENST00000409364 SEMA3EO15041 775 aa7.42□□□□□ -1.22
GTF3C3-202ENST00000409364 STX6O43752 255 aa7.42□□□□□ -1.22
GTF3C3-202ENST00000409364 PHF14O94880 888 aa7.42□□□□□ -1.22
GTF3C3-202ENST00000409364 ZSCAN22P10073 491 aaPredicted RBP7.42□□□□□ -1.22
GTF3C3-202ENST00000409364 SYT1P21579 422 aa7.42□□□□□ -1.22
GTF3C3-202ENST00000409364 GJB2P29033 226 aa7.42□□□□□ -1.22
GTF3C3-202ENST00000409364 TM4SF1P30408 202 aa7.42□□□□□ -1.22
GTF3C3-202ENST00000409364 KLHL40Q2TBA0 621 aa7.42□□□□□ -1.22
GTF3C3-202ENST00000409364 TMED8Q6PL24 325 aaPredicted RBP7.42□□□□□ -1.22
GTF3C3-202ENST00000409364 ADGRD1Q6QNK2 874 aa7.42□□□□□ -1.22
GTF3C3-202ENST00000409364 Q6ZUG5 572 aa7.42□□□□□ -1.22
GTF3C3-202ENST00000409364 VPS37DQ86XT2 251 aa7.42□□□□□ -1.22
GTF3C3-202ENST00000409364 AIDAQ96BJ3 306 aa7.42□□□□□ -1.22
GTF3C3-202ENST00000409364 AGXT2Q9BYV1 514 aa7.42□□□□□ -1.22
GTF3C3-202ENST00000409364 LRP2BPQ9P2M1 347 aa7.42□□□□□ -1.22
GTF3C3-202ENST00000409364 DENND2AQ9ULE3 1009 aa7.42□□□□□ -1.22
GTF3C3-202ENST00000409364 ISY1Q9ULR0 285 aaKnown RBP7.42□□□□□ -1.22
GTF3C3-202ENST00000409364 DDX49Q9Y6V7 483 aaKnown RBP7.42□□□□□ -1.22
GTF3C3-202ENST00000409364 SPEF2Q9C093 1822 aa7.42□□□□□ -1.22
GTF3C3-202ENST00000409364 TCRBV5S4A2TA0A5A2 114 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 PATL2C9JE40 543 aaKnown RBP7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 IGSF3O75054 1194 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 TRIM37O94972 964 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 LARGE1O95461 756 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 APPP05067 770 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 GNAT2P19087 354 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 TRDNQ13061 729 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 NFIXQ14938 502 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 LARP1BQ659C4 914 aaKnown RBP7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 POTEAQ6S8J7 498 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 STOX1Q6ZVD7 989 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 FBXO33Q7Z6M2 555 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 CELF1Q92879 486 aaKnown RBP7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 ZNF274Q96GC6 653 aaPredicted RBP7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 TCEANC2Q96MN5 208 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 STRBPQ96SI9 672 aaKnown RBP7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 LLPHQ9BRT6 129 aaKnown RBP7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 LMBRD1Q9NUN5 540 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 ANKRD36CQ5JPF3 1778 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 ZNF804BA4D1E1 1349 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 CARMIL3Q8ND23 1372 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 PFKFB2O60825 505 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 PRPF40AO75400 957 aaKnown RBP7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 NCLP19338 710 aaKnown RBP7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 MCM5P33992 734 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 L1TD1Q5T7N2 865 aaKnown RBP7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 TTLL5Q6EMB2 1281 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 DPY19L2Q6NUT2 758 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 AMIGO3Q86WK7 504 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 PLCD3Q8N3E9 789 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 MAGEB6Q8N7X4 407 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 NECAB1Q8N987 351 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 CNBD1Q8NA66 436 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 NCOA7Q8NI08 942 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 BRF1Q92994 677 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 FAM84BQ96KN1 310 aaPredicted RBP7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 NACAP1Q9BZK3 213 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 GZF1Q9H116 711 aaPredicted RBP7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 WWC3Q9ULE0 1092 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 KIF3AQ9Y496 699 aa7.41□□□□□ -1.22
GTF3C3-202ENST00000409364 PLSCR1O15162 318 aa7.4□□□□□ -1.23
GTF3C3-202ENST00000409364 FOXP2O15409 715 aa7.4□□□□□ -1.23
GTF3C3-202ENST00000409364 GYS1P13807 737 aa7.4□□□□□ -1.23
GTF3C3-202ENST00000409364 HIBADHP31937 336 aaKnown RBP7.4□□□□□ -1.23
GTF3C3-202ENST00000409364 GYG1P46976 350 aa7.4□□□□□ -1.23
GTF3C3-202ENST00000409364 EVCP57679 992 aa7.4□□□□□ -1.23
GTF3C3-202ENST00000409364 COL9A3Q14050 684 aaPredicted RBP7.4□□□□□ -1.23
GTF3C3-202ENST00000409364 TXNRD1Q16881 649 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms