RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 CHMP3Q9Y3E7 222 aa16.66■□□□□ 0.26
TUBA3D-202ENST00000409047 CEP290O15078 2479 aa16.65■□□□□ 0.26
TUBA3D-202ENST00000409047 PLIN1O60240 522 aa16.65■□□□□ 0.26
TUBA3D-202ENST00000409047 FXR1P51114 621 aaKnown RBP eCLIP16.65■□□□□ 0.26
TUBA3D-202ENST00000409047 RBM5P52756 815 aaKnown RBP eCLIP16.65■□□□□ 0.26
TUBA3D-202ENST00000409047 VGLL4Q14135 290 aa16.65■□□□□ 0.26
TUBA3D-202ENST00000409047 DZIP1LQ8IYY4 767 aaKnown RBP16.65■□□□□ 0.26
TUBA3D-202ENST00000409047 PUS3Q9BZE2 481 aaKnown RBP16.65■□□□□ 0.26
TUBA3D-202ENST00000409047 TMEM39BQ9GZU3 492 aa16.65■□□□□ 0.26
TUBA3D-202ENST00000409047 TTF2Q9UNY4 1162 aaKnown RBP16.65■□□□□ 0.26
TUBA3D-202ENST00000409047 PTCH2Q9Y6C5 1203 aa16.65■□□□□ 0.26
TUBA3D-202ENST00000409047 GRM8O00222 908 aa16.64■□□□□ 0.25
TUBA3D-202ENST00000409047 EXOSC9Q06265 439 aaKnown RBP16.64■□□□□ 0.25
TUBA3D-202ENST00000409047 TNFAIP1Q13829 316 aa16.64■□□□□ 0.25
TUBA3D-202ENST00000409047 UBE4AQ14139 1066 aa16.64■□□□□ 0.25
TUBA3D-202ENST00000409047 SPINK5Q9NQ38 1064 aaPredicted RBP16.64■□□□□ 0.25
TUBA3D-202ENST00000409047 TCP10L2B9ZVM9 353 aa16.63■□□□□ 0.25
TUBA3D-202ENST00000409047 CRKP46108 304 aa16.63■□□□□ 0.25
TUBA3D-202ENST00000409047 CCDC57Q2TAC2 916 aa16.63■□□□□ 0.25
TUBA3D-202ENST00000409047 RIPOR2Q9Y4F9 1068 aa16.63■□□□□ 0.25
TUBA3D-202ENST00000409047 CCL15-CCL14A0A0B4J2E2 113 aa16.62■□□□□ 0.25
TUBA3D-202ENST00000409047 HIBADHP31937 336 aaKnown RBP16.62■□□□□ 0.25
TUBA3D-202ENST00000409047 MAP3K9P80192 1104 aa16.62■□□□□ 0.25
TUBA3D-202ENST00000409047 CCL15Q16663 113 aa16.62■□□□□ 0.25
TUBA3D-202ENST00000409047 FBXO33Q7Z6M2 555 aa16.62■□□□□ 0.25
TUBA3D-202ENST00000409047 ARHGAP39Q9C0H5 1083 aa16.62■□□□□ 0.25
TUBA3D-202ENST00000409047 CNNM1Q9NRU3 951 aa16.62■□□□□ 0.25
TUBA3D-202ENST00000409047 SNCAIPQ9Y6H5 919 aa16.62■□□□□ 0.25
TUBA3D-202ENST00000409047 TRIOBPQ9H2D6 2365 aa16.62■□□□□ 0.25
TUBA3D-202ENST00000409047 GTF2A2P52657 109 aa16.61■□□□□ 0.25
TUBA3D-202ENST00000409047 TAF1CQ15572 869 aaPredicted RBP16.61■□□□□ 0.25
TUBA3D-202ENST00000409047 SUCLG2Q96I99 432 aa16.61■□□□□ 0.25
TUBA3D-202ENST00000409047 SPDYE5A6NIY4 337 aa16.6■□□□□ 0.25
TUBA3D-202ENST00000409047 CACNB3P54284 484 aa16.6■□□□□ 0.25
TUBA3D-202ENST00000409047 WDR63Q8IWG1 891 aa16.6■□□□□ 0.25
TUBA3D-202ENST00000409047 OTUD5Q96G74 571 aa16.6■□□□□ 0.25
TUBA3D-202ENST00000409047 ZFYVE28Q9HCC9 887 aa16.6■□□□□ 0.25
TUBA3D-202ENST00000409047 CTGFP29279 349 aa16.59■□□□□ 0.25
TUBA3D-202ENST00000409047 SLC9C1Q4G0N8 1177 aa16.59■□□□□ 0.25
TUBA3D-202ENST00000409047 TAF7LQ5H9L4 462 aa16.59■□□□□ 0.25
TUBA3D-202ENST00000409047 VGLL2Q8N8G2 317 aa16.59■□□□□ 0.25
TUBA3D-202ENST00000409047 IQSEC3Q9UPP2 1182 aaPredicted RBP16.59■□□□□ 0.25
TUBA3D-202ENST00000409047 COLQQ9Y215 455 aaPredicted RBP16.59■□□□□ 0.25
TUBA3D-202ENST00000409047 BTBD19C9JJ37 291 aa16.58■□□□□ 0.24
TUBA3D-202ENST00000409047 TLR2O60603 784 aa16.58■□□□□ 0.24
TUBA3D-202ENST00000409047 ALDH1L1O75891 902 aa16.58■□□□□ 0.24
TUBA3D-202ENST00000409047 NBPF7P0C2Y1 421 aaPredicted RBP16.58■□□□□ 0.24
TUBA3D-202ENST00000409047 HDLBPQ00341 1268 aaKnown RBP16.58■□□□□ 0.24
TUBA3D-202ENST00000409047 TMEM106CQ9BVX2 250 aa16.58■□□□□ 0.24
TUBA3D-202ENST00000409047 UTYO14607 1347 aa16.58■□□□□ 0.24
TUBA3D-202ENST00000409047 IRF6O14896 467 aa16.57■□□□□ 0.24
TUBA3D-202ENST00000409047 LACTBP83111 547 aaPredicted RBP16.57■□□□□ 0.24
TUBA3D-202ENST00000409047 RABL6Q3YEC7 729 aaPredicted RBP16.57■□□□□ 0.24
TUBA3D-202ENST00000409047 LRRC24Q50LG9 513 aa16.57■□□□□ 0.24
TUBA3D-202ENST00000409047 APOBEC3HQ6NTF7 200 aaKnown RBP16.57■□□□□ 0.24
TUBA3D-202ENST00000409047 SH3TC2Q8TF17 1288 aa16.57■□□□□ 0.24
TUBA3D-202ENST00000409047 ZKSCAN4Q969J2 545 aaPredicted RBP16.57■□□□□ 0.24
TUBA3D-202ENST00000409047 ZCCHC17Q9NP64 241 aaKnown RBP16.57■□□□□ 0.24
TUBA3D-202ENST00000409047 CSADQ9Y600 493 aa16.57■□□□□ 0.24
TUBA3D-202ENST00000409047 ADGRA2Q96PE1 1338 aa16.56■□□□□ 0.24
TUBA3D-202ENST00000409047 TNNI2P48788 182 aa16.56■□□□□ 0.24
TUBA3D-202ENST00000409047 NBPF11Q86T75 865 aa16.56■□□□□ 0.24
TUBA3D-202ENST00000409047 ERO1BQ86YB8 467 aa16.56■□□□□ 0.24
TUBA3D-202ENST00000409047 ANKRD44Q8N8A2 993 aa16.56■□□□□ 0.24
TUBA3D-202ENST00000409047 SHISA4Q96DD7 197 aa16.56■□□□□ 0.24
TUBA3D-202ENST00000409047 ZDHHC15Q96MV8 337 aa16.56■□□□□ 0.24
TUBA3D-202ENST00000409047 C9orf78Q9NZ63 289 aaPredicted RBP16.56■□□□□ 0.24
TUBA3D-202ENST00000409047 SALL2Q9Y467 1007 aaPredicted RBP16.56■□□□□ 0.24
TUBA3D-202ENST00000409047 MROH5Q6ZUA9 1318 aa16.55■□□□□ 0.24
TUBA3D-202ENST00000409047 MYCP01106 439 aaPredicted RBP16.55■□□□□ 0.24
TUBA3D-202ENST00000409047 CHAF1AQ13111 956 aaPredicted RBP16.55■□□□□ 0.24
TUBA3D-202ENST00000409047 C17orf99Q6UX52 265 aa16.55■□□□□ 0.24
TUBA3D-202ENST00000409047 FAM83AQ86UY5 434 aa16.55■□□□□ 0.24
TUBA3D-202ENST00000409047 WRNIP1Q96S55 665 aa16.55■□□□□ 0.24
TUBA3D-202ENST00000409047 MRIQ9BWK5 157 aa16.55■□□□□ 0.24
TUBA3D-202ENST00000409047 BICC1Q9H694 974 aaKnown RBP16.55■□□□□ 0.24
TUBA3D-202ENST00000409047 RPAP1Q9BWH6 1393 aaPredicted RBP16.54■□□□□ 0.24
TUBA3D-202ENST00000409047 H0YGN5 161 aa16.54■□□□□ 0.24
TUBA3D-202ENST00000409047 CETPP11597 493 aa16.54■□□□□ 0.24
TUBA3D-202ENST00000409047 BCAMP50895 628 aa16.54■□□□□ 0.24
TUBA3D-202ENST00000409047 PPIL2Q13356 520 aa16.54■□□□□ 0.24
TUBA3D-202ENST00000409047 MOGSQ13724 837 aa16.54■□□□□ 0.24
TUBA3D-202ENST00000409047 ARHGEF6Q15052 776 aa16.54■□□□□ 0.24
TUBA3D-202ENST00000409047 SLC4A8Q2Y0W8 1093 aa16.54■□□□□ 0.24
TUBA3D-202ENST00000409047 FKBP1CQ5VVH2 108 aa16.54■□□□□ 0.24
TUBA3D-202ENST00000409047 SLC4A10Q6U841 1118 aa16.54■□□□□ 0.24
TUBA3D-202ENST00000409047 TEKT1Q969V4 418 aa16.54■□□□□ 0.24
TUBA3D-202ENST00000409047 SRCIN1Q9C0H9 1055 aa16.54■□□□□ 0.24
TUBA3D-202ENST00000409047 LAMA3Q16787 3333 aa16.54■□□□□ 0.24
TUBA3D-202ENST00000409047 MYH13Q9UKX3 1938 aa16.54■□□□□ 0.24
TUBA3D-202ENST00000409047 PDE8BO95263 885 aa16.53■□□□□ 0.24
TUBA3D-202ENST00000409047 FGFR2P21802 821 aa16.53■□□□□ 0.24
TUBA3D-202ENST00000409047 SNAPC2Q13487 334 aa16.53■□□□□ 0.24
TUBA3D-202ENST00000409047 MTFR1Q15390 333 aa16.53■□□□□ 0.24
TUBA3D-202ENST00000409047 UBE2Q1Q7Z7E8 422 aa16.53■□□□□ 0.24
TUBA3D-202ENST00000409047 TBC1D22AQ8WUA7 517 aa16.53■□□□□ 0.24
TUBA3D-202ENST00000409047 COL6A3P12111 3177 aa16.53■□□□□ 0.24
TUBA3D-202ENST00000409047 INPP5BP32019 993 aa16.52■□□□□ 0.24
TUBA3D-202ENST00000409047 KLHDC4Q8TBB5 520 aa16.52■□□□□ 0.24
TUBA3D-202ENST00000409047 TRIM47Q96LD4 638 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms