RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 LAMB1P07942 1786 aa28.09■■■□□ 2.09
KDELR3-202ENST00000409006 BCAR3O75815 825 aa28.09■■■□□ 2.09
KDELR3-202ENST00000409006 DGKZQ13574 1117 aa28.09■■■□□ 2.09
KDELR3-202ENST00000409006 CDAN1Q8IWY9 1227 aa28.09■■■□□ 2.09
KDELR3-202ENST00000409006 LPIN2Q92539 896 aa28.09■■■□□ 2.09
KDELR3-202ENST00000409006 CLMNQ96JQ2 1002 aa28.09■■■□□ 2.09
KDELR3-202ENST00000409006 CIAO1O76071 339 aa28.08■■■□□ 2.09
KDELR3-202ENST00000409006 SLC5A1P13866 664 aa28.08■■■□□ 2.09
KDELR3-202ENST00000409006 TM4SF4P48230 202 aa28.08■■■□□ 2.09
KDELR3-202ENST00000409006 TBC1D22AQ8WUA7 517 aa28.08■■■□□ 2.09
KDELR3-202ENST00000409006 SUPT20HL1Q3ZLR7 823 aa28.07■■■□□ 2.08
KDELR3-202ENST00000409006 SPRYD7Q5W111 196 aa28.07■■■□□ 2.08
KDELR3-202ENST00000409006 TCP10L2B9ZVM9 353 aa28.06■■■□□ 2.08
KDELR3-202ENST00000409006 PPP1R12BO60237 982 aaPredicted RBP28.06■■■□□ 2.08
KDELR3-202ENST00000409006 USP2O75604 605 aaPredicted RBP28.06■■■□□ 2.08
KDELR3-202ENST00000409006 TRIM27P14373 513 aa28.06■■■□□ 2.08
KDELR3-202ENST00000409006 DIEXFQ68CQ4 756 aaKnown RBP28.06■■■□□ 2.08
KDELR3-202ENST00000409006 TEPSINQ96N21 525 aa28.06■■■□□ 2.08
KDELR3-202ENST00000409006 FBXO3Q9UK99 471 aa28.06■■■□□ 2.08
KDELR3-202ENST00000409006 CCDC85CA6NKD9 419 aa28.05■■■□□ 2.08
KDELR3-202ENST00000409006 TBC1D8O95759 1140 aa28.05■■■□□ 2.08
KDELR3-202ENST00000409006 HDLBPQ00341 1268 aaKnown RBP28.05■■■□□ 2.08
KDELR3-202ENST00000409006 SLC10A4Q96EP9 437 aa28.05■■■□□ 2.08
KDELR3-202ENST00000409006 ATP2B3Q16720 1220 aa28.04■■■□□ 2.08
KDELR3-202ENST00000409006 COPRSQ9NQ92 184 aa28.04■■■□□ 2.08
KDELR3-202ENST00000409006 CEP126Q9P2H0 1117 aa28.04■■■□□ 2.08
KDELR3-202ENST00000409006 CACNB3P54284 484 aa28.03■■■□□ 2.08
KDELR3-202ENST00000409006 TNFAIP1Q13829 316 aa28.03■■■□□ 2.08
KDELR3-202ENST00000409006 FRAT1Q92837 279 aaPredicted RBP28.03■■■□□ 2.08
KDELR3-202ENST00000409006 TEKT1Q969V4 418 aa28.03■■■□□ 2.08
KDELR3-202ENST00000409006 TMEM39BQ9GZU3 492 aa28.03■■■□□ 2.08
KDELR3-202ENST00000409006 HDAC5Q9UQL6 1122 aa28.03■■■□□ 2.08
KDELR3-202ENST00000409006 IL15P40933 162 aaPredicted RBP28.02■■■□□ 2.08
KDELR3-202ENST00000409006 HNRNPUQ00839 825 aaKnown RBP eCLIP28.02■■■□□ 2.08
KDELR3-202ENST00000409006 ATF7IPQ6VMQ6 1270 aa28.02■■■□□ 2.08
KDELR3-202ENST00000409006 WNK4Q96J92 1243 aa28.02■■■□□ 2.08
KDELR3-202ENST00000409006 ZDHHC15Q96MV8 337 aa28.02■■■□□ 2.08
KDELR3-202ENST00000409006 APOBEC3HQ6NTF7 200 aaKnown RBP28.01■■■□□ 2.07
KDELR3-202ENST00000409006 CLUAP1Q96AJ1 413 aa28.01■■■□□ 2.07
KDELR3-202ENST00000409006 MRIQ9BWK5 157 aa28.01■■■□□ 2.07
KDELR3-202ENST00000409006 R3HDMLQ9H3Y0 253 aa28.01■■■□□ 2.07
KDELR3-202ENST00000409006 IPO8O15397 1037 aaKnown RBP28■■■□□ 2.07
KDELR3-202ENST00000409006 GNAI3P08754 354 aa28■■■□□ 2.07
KDELR3-202ENST00000409006 ADORA1P30542 326 aa28■■■□□ 2.07
KDELR3-202ENST00000409006 GJA5P36382 358 aa28■■■□□ 2.07
KDELR3-202ENST00000409006 IREB2P48200 963 aaKnown RBP28■■■□□ 2.07
KDELR3-202ENST00000409006 SREBF2Q12772 1141 aa28■■■□□ 2.07
KDELR3-202ENST00000409006 SUGT1Q9Y2Z0 365 aa28■■■□□ 2.07
KDELR3-202ENST00000409006 SRGAP3O43295 1099 aa27.99■■■□□ 2.07
KDELR3-202ENST00000409006 PHKA1P46020 1223 aa27.99■■■□□ 2.07
KDELR3-202ENST00000409006 WDR66Q8TBY9 1149 aa27.99■■■□□ 2.07
KDELR3-202ENST00000409006 ZNF296Q8WUU4 475 aaPredicted RBP27.98■■■□□ 2.07
KDELR3-202ENST00000409006 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.98■■■□□ 2.07
KDELR3-202ENST00000409006 MYH2Q9UKX2 1941 aa27.97■■■□□ 2.07
KDELR3-202ENST00000409006 UNCXA6NJT0 531 aa27.97■■■□□ 2.07
KDELR3-202ENST00000409006 ZBTB48P10074 688 aaPredicted RBP27.97■■■□□ 2.07
KDELR3-202ENST00000409006 TNNI2P48788 182 aa27.97■■■□□ 2.07
KDELR3-202ENST00000409006 MTX1Q13505 466 aa27.97■■■□□ 2.07
KDELR3-202ENST00000409006 HHIPL2Q6UWX4 724 aa27.97■■■□□ 2.07
KDELR3-202ENST00000409006 ANKRD13AQ8IZ07 590 aa27.97■■■□□ 2.07
KDELR3-202ENST00000409006 MAST3O60307 1309 aa27.96■■■□□ 2.07
KDELR3-202ENST00000409006 MANSC4A6NHS7 340 aaPredicted RBP27.96■■■□□ 2.07
KDELR3-202ENST00000409006 PRDX5P30044 214 aa27.96■■■□□ 2.07
KDELR3-202ENST00000409006 TIMM10P62072 90 aa27.96■■■□□ 2.07
KDELR3-202ENST00000409006 AK9Q5TCS8 1911 aa27.96■■■□□ 2.07
KDELR3-202ENST00000409006 DIXDC1Q155Q3 683 aa27.95■■■□□ 2.06
KDELR3-202ENST00000409006 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.95■■■□□ 2.06
KDELR3-202ENST00000409006 TMEM57Q8N5G2 664 aa27.95■■■□□ 2.06
KDELR3-202ENST00000409006 ELP3Q9H9T3 547 aa27.95■■■□□ 2.06
KDELR3-202ENST00000409006 GPR25O00155 361 aa27.94■■■□□ 2.06
KDELR3-202ENST00000409006 IGF2BP3O00425 579 aaKnown RBP eCLIP27.94■■■□□ 2.06
KDELR3-202ENST00000409006 TFCP2Q12800 502 aa27.94■■■□□ 2.06
KDELR3-202ENST00000409006 CCDC102BQ68D86 513 aa27.94■■■□□ 2.06
KDELR3-202ENST00000409006 CTU1Q7Z7A3 348 aaKnown RBP27.94■■■□□ 2.06
KDELR3-202ENST00000409006 IFNL1Q8IU54 200 aa27.94■■■□□ 2.06
KDELR3-202ENST00000409006 GNL3LQ9NVN8 582 aaKnown RBP27.94■■■□□ 2.06
KDELR3-202ENST00000409006 PNMA6EA0A0J9YXQ4 647 aa27.93■■■□□ 2.06
KDELR3-202ENST00000409006 CNKSR2Q8WXI2 1034 aa27.93■■■□□ 2.06
KDELR3-202ENST00000409006 CFHR5Q9BXR6 569 aa27.93■■■□□ 2.06
KDELR3-202ENST00000409006 DAGLAQ9Y4D2 1042 aa27.93■■■□□ 2.06
KDELR3-202ENST00000409006 GNAI2P04899 355 aa27.92■■■□□ 2.06
KDELR3-202ENST00000409006 ZKSCAN2Q63HK3 967 aa27.92■■■□□ 2.06
KDELR3-202ENST00000409006 FAM83AQ86UY5 434 aa27.92■■■□□ 2.06
KDELR3-202ENST00000409006 DENND2AQ9ULE3 1009 aa27.92■■■□□ 2.06
KDELR3-202ENST00000409006 A0A1B0GUL7 405 aa27.91■■■□□ 2.06
KDELR3-202ENST00000409006 INHBEP58166 350 aa27.91■■■□□ 2.06
KDELR3-202ENST00000409006 FKBP1CQ5VVH2 108 aa27.91■■■□□ 2.06
KDELR3-202ENST00000409006 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.91■■■□□ 2.06
KDELR3-202ENST00000409006 OPTNQ96CV9 577 aa27.91■■■□□ 2.06
KDELR3-202ENST00000409006 TMOD2Q9NZR1 351 aa27.91■■■□□ 2.06
KDELR3-202ENST00000409006 SALL1Q9NSC2 1324 aa27.91■■■□□ 2.06
KDELR3-202ENST00000409006 SEMA3EO15041 775 aa27.9■■■□□ 2.06
KDELR3-202ENST00000409006 LDHBP07195 334 aaKnown RBP27.9■■■□□ 2.06
KDELR3-202ENST00000409006 MAP3K9P80192 1104 aa27.9■■■□□ 2.06
KDELR3-202ENST00000409006 VGLL4Q14135 290 aa27.9■■■□□ 2.06
KDELR3-202ENST00000409006 NOM1Q5C9Z4 860 aaKnown RBP27.9■■■□□ 2.06
KDELR3-202ENST00000409006 XAGE2Q96GT9 111 aa27.9■■■□□ 2.06
KDELR3-202ENST00000409006 PTPN18Q99952 460 aa27.9■■■□□ 2.06
KDELR3-202ENST00000409006 RASGRF1Q13972 1273 aa27.89■■■□□ 2.06
KDELR3-202ENST00000409006 CDC42EP5Q6NZY7 148 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms