RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.08■■■□□ 2.25
DNMT3A-206ENST00000406659 FAM184AQ8NB25 1140 aa29.08■■■□□ 2.25
DNMT3A-206ENST00000406659 SMARCC2Q8TAQ2 1214 aa29.08■■■□□ 2.25
DNMT3A-206ENST00000406659 GADD45BO75293 160 aaPredicted RBP29.07■■■□□ 2.24
DNMT3A-206ENST00000406659 CCT2P78371 535 aaKnown RBP29.07■■■□□ 2.24
DNMT3A-206ENST00000406659 FAM84BQ96KN1 310 aaPredicted RBP29.07■■■□□ 2.24
DNMT3A-206ENST00000406659 BRPF3Q9ULD4 1205 aa29.07■■■□□ 2.24
DNMT3A-206ENST00000406659 DENND2AQ9ULE3 1009 aa29.07■■■□□ 2.24
DNMT3A-206ENST00000406659 ZMYM6O95789 1325 aa29.07■■■□□ 2.24
DNMT3A-206ENST00000406659 GNAT2P19087 354 aa29.06■■■□□ 2.24
DNMT3A-206ENST00000406659 TM4SF1P30408 202 aa29.06■■■□□ 2.24
DNMT3A-206ENST00000406659 DNM1Q05193 864 aaKnown RBP29.06■■■□□ 2.24
DNMT3A-206ENST00000406659 DDX11Q96FC9 970 aa29.06■■■□□ 2.24
DNMT3A-206ENST00000406659 NBPF3Q9H094 633 aa29.06■■■□□ 2.24
DNMT3A-206ENST00000406659 ABCF2Q9UG63 623 aa29.06■■■□□ 2.24
DNMT3A-206ENST00000406659 EVCP57679 992 aa29.06■■■□□ 2.24
DNMT3A-206ENST00000406659 HMGN5P82970 282 aaKnown RBP29.06■■■□□ 2.24
DNMT3A-206ENST00000406659 IFNL3Q8IZI9 196 aa29.06■■■□□ 2.24
DNMT3A-206ENST00000406659 CNBD1Q8NA66 436 aa29.06■■■□□ 2.24
DNMT3A-206ENST00000406659 NSUN7Q8NE18 718 aaKnown RBP29.06■■■□□ 2.24
DNMT3A-206ENST00000406659 NAPBQ9H115 298 aa29.06■■■□□ 2.24
DNMT3A-206ENST00000406659 TMEM63CQ9P1W3 806 aa29.06■■■□□ 2.24
DNMT3A-206ENST00000406659 KIF3AQ9Y496 699 aa29.06■■■□□ 2.24
DNMT3A-206ENST00000406659 TRIM37O94972 964 aa29.05■■■□□ 2.24
DNMT3A-206ENST00000406659 CYP7A1P22680 504 aa29.05■■■□□ 2.24
DNMT3A-206ENST00000406659 FBXO33Q7Z6M2 555 aa29.05■■■□□ 2.24
DNMT3A-206ENST00000406659 TBC1D10CQ8IV04 446 aa29.05■■■□□ 2.24
DNMT3A-206ENST00000406659 SYAP1Q96A49 352 aaPredicted RBP29.05■■■□□ 2.24
DNMT3A-206ENST00000406659 RAI14Q9P0K7 980 aa29.05■■■□□ 2.24
DNMT3A-206ENST00000406659 PNPLA7Q6ZV29 1317 aa29.04■■■□□ 2.24
DNMT3A-206ENST00000406659 FIBPO43427 364 aa29.04■■■□□ 2.24
DNMT3A-206ENST00000406659 ANTXR2P58335 489 aa29.04■■■□□ 2.24
DNMT3A-206ENST00000406659 FERMT3Q86UX7 667 aa29.04■■■□□ 2.24
DNMT3A-206ENST00000406659 GPHNQ9NQX3 736 aaPredicted RBP29.04■■■□□ 2.24
DNMT3A-206ENST00000406659 H3BQV1 296 aa29.03■■■□□ 2.24
DNMT3A-206ENST00000406659 IFFO2Q5TF58 517 aa29.03■■■□□ 2.24
DNMT3A-206ENST00000406659 NACAP1Q9BZK3 213 aa29.03■■■□□ 2.24
DNMT3A-206ENST00000406659 NCOA5Q9HCD5 579 aaKnown RBP29.03■■■□□ 2.24
DNMT3A-206ENST00000406659 PTPDC1A2A3K4 754 aa29.03■■■□□ 2.24
DNMT3A-206ENST00000406659 SEMA3EO15041 775 aa29.03■■■□□ 2.24
DNMT3A-206ENST00000406659 CTDNEP1O95476 244 aa29.03■■■□□ 2.24
DNMT3A-206ENST00000406659 LCORLQ8N3X6 602 aa29.03■■■□□ 2.24
DNMT3A-206ENST00000406659 EPB41L4AQ9HCS5 686 aaPredicted RBP29.03■■■□□ 2.24
DNMT3A-206ENST00000406659 SLC4A4Q9Y6R1 1079 aa29.03■■■□□ 2.24
DNMT3A-206ENST00000406659 GSG1L2A8MUP6 293 aa29.02■■■□□ 2.24
DNMT3A-206ENST00000406659 UBE2HP62256 183 aa29.02■■■□□ 2.24
DNMT3A-206ENST00000406659 KLF18A0A0U1RQI7 1052 aa29.01■■■□□ 2.23
DNMT3A-206ENST00000406659 MIGA1Q8NAN2 632 aa29.01■■■□□ 2.23
DNMT3A-206ENST00000406659 BRWD3Q6RI45 1802 aa29.01■■■□□ 2.23
DNMT3A-206ENST00000406659 HIBADHP31937 336 aaKnown RBP29.01■■■□□ 2.23
DNMT3A-206ENST00000406659 KRT85P78386 507 aa29.01■■■□□ 2.23
DNMT3A-206ENST00000406659 UBR3Q6ZT12 1888 aa29■■■□□ 2.23
DNMT3A-206ENST00000406659 PRKAB2O43741 272 aa29■■■□□ 2.23
DNMT3A-206ENST00000406659 COL1A1P02452 1464 aaPredicted RBP29■■■□□ 2.23
DNMT3A-206ENST00000406659 GYS1P13807 737 aa28.99■■■□□ 2.23
DNMT3A-206ENST00000406659 TDO2P48775 406 aa28.99■■■□□ 2.23
DNMT3A-206ENST00000406659 GRAPQ13588 217 aa28.99■■■□□ 2.23
DNMT3A-206ENST00000406659 GRAPLQ8TC17 118 aaPredicted RBP28.99■■■□□ 2.23
DNMT3A-206ENST00000406659 TNRC6CQ9HCJ0 1690 aaKnown RBP28.99■■■□□ 2.23
DNMT3A-206ENST00000406659 MAGEB6P1A0A0J9YX57 407 aa28.98■■■□□ 2.23
DNMT3A-206ENST00000406659 DHX16O60231 1041 aaKnown RBP28.98■■■□□ 2.23
DNMT3A-206ENST00000406659 KLRK1P26718 216 aa28.98■■■□□ 2.23
DNMT3A-206ENST00000406659 CYB5R4Q7L1T6 521 aa28.98■■■□□ 2.23
DNMT3A-206ENST00000406659 TFCP2L1Q9NZI6 479 aa28.98■■■□□ 2.23
DNMT3A-206ENST00000406659 GOLGA8BA8MQT2 603 aa28.98■■■□□ 2.23
DNMT3A-206ENST00000406659 B4E1Z4 1266 aa28.98■■■□□ 2.23
DNMT3A-206ENST00000406659 HMGB2P26583 209 aaKnown RBP28.98■■■□□ 2.23
DNMT3A-206ENST00000406659 PRR5LQ6MZQ0 368 aa28.98■■■□□ 2.23
DNMT3A-206ENST00000406659 PANK2Q9BZ23 570 aa28.98■■■□□ 2.23
DNMT3A-206ENST00000406659 CTDSPL2Q05D32 466 aa28.97■■■□□ 2.23
DNMT3A-206ENST00000406659 NAA16Q6N069 864 aaPredicted RBP28.97■■■□□ 2.23
DNMT3A-206ENST00000406659 ANGEL1Q9UNK9 670 aaKnown RBP28.97■■■□□ 2.23
DNMT3A-206ENST00000406659 PDS5AQ29RF7 1337 aaKnown RBP28.97■■■□□ 2.23
DNMT3A-206ENST00000406659 ST5P78524 1137 aa28.96■■■□□ 2.23
DNMT3A-206ENST00000406659 ZSCAN16Q9H4T2 348 aaPredicted RBP28.96■■■□□ 2.23
DNMT3A-206ENST00000406659 CNNM2Q9H8M5 875 aa28.96■■■□□ 2.23
DNMT3A-206ENST00000406659 NEDD4P46934 1319 aa28.96■■■□□ 2.23
DNMT3A-206ENST00000406659 SALL1Q9NSC2 1324 aa28.96■■■□□ 2.23
DNMT3A-206ENST00000406659 SYCE3A1L190 88 aa28.96■■■□□ 2.23
DNMT3A-206ENST00000406659 TMEM87BQ96K49 555 aa28.96■■■□□ 2.23
DNMT3A-206ENST00000406659 SERPINB2P05120 415 aa28.95■■■□□ 2.22
DNMT3A-206ENST00000406659 RESTQ13127 1097 aa28.95■■■□□ 2.22
DNMT3A-206ENST00000406659 AKNAD1Q5T1N1 836 aa28.95■■■□□ 2.22
DNMT3A-206ENST00000406659 FAM173BQ6P4H8 233 aa28.95■■■□□ 2.22
DNMT3A-206ENST00000406659 LRSAM1Q6UWE0 723 aa28.95■■■□□ 2.22
DNMT3A-206ENST00000406659 ADGRA1Q86SQ6 560 aa28.95■■■□□ 2.22
DNMT3A-206ENST00000406659 RPGRQ92834 1020 aaKnown RBP28.95■■■□□ 2.22
DNMT3A-206ENST00000406659 KRT23Q9C075 422 aa28.95■■■□□ 2.22
DNMT3A-206ENST00000406659 ANKIB1Q9P2G1 1089 aa28.95■■■□□ 2.22
DNMT3A-206ENST00000406659 HPS5Q9UPZ3 1129 aa28.95■■■□□ 2.22
DNMT3A-206ENST00000406659 SH2B2O14492 632 aaPredicted RBP28.94■■■□□ 2.22
DNMT3A-206ENST00000406659 TPRNQ4KMQ1 711 aa28.94■■■□□ 2.22
DNMT3A-206ENST00000406659 MFSD6Q6ZSS7 791 aa28.94■■■□□ 2.22
DNMT3A-206ENST00000406659 TXNRD1Q16881 649 aa28.93■■■□□ 2.22
DNMT3A-206ENST00000406659 SCAND2PQ9GZW5 306 aaPredicted RBP28.93■■■□□ 2.22
DNMT3A-206ENST00000406659 FOSBP53539 338 aa28.93■■■□□ 2.22
DNMT3A-206ENST00000406659 INCENPQ9NQS7 918 aa28.93■■■□□ 2.22
DNMT3A-206ENST00000406659 LEMD3Q9Y2U8 911 aa28.93■■■□□ 2.22
DNMT3A-206ENST00000406659 CPLX1O14810 134 aa28.92■■■□□ 2.22
DNMT3A-206ENST00000406659 CHAF1AQ13111 956 aaPredicted RBP28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms