RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 GIPC1O14908 333 aa13.53□□□□□ -0.24
SMCR8-201ENST00000406438 RTCBQ9Y3I0 505 aaKnown RBP13.53□□□□□ -0.24
SMCR8-201ENST00000406438 TNNC1P63316 161 aa13.53□□□□□ -0.24
SMCR8-201ENST00000406438 CALCOCO2Q13137 446 aa13.53□□□□□ -0.24
SMCR8-201ENST00000406438 SIRT1Q96EB6 747 aa13.53□□□□□ -0.24
SMCR8-201ENST00000406438 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.53□□□□□ -0.24
SMCR8-201ENST00000406438 XAGE3Q8WTP9 111 aa13.53□□□□□ -0.24
SMCR8-201ENST00000406438 STMN2Q93045 179 aa13.53□□□□□ -0.24
SMCR8-201ENST00000406438 PPANQ9NQ55 473 aaKnown RBP13.53□□□□□ -0.24
SMCR8-201ENST00000406438 PICK1Q9NRD5 415 aa13.53□□□□□ -0.24
SMCR8-201ENST00000406438 UTP11Q9Y3A2 253 aaKnown RBP13.53□□□□□ -0.24
SMCR8-201ENST00000406438 CAPN2P17655 700 aa13.53□□□□□ -0.24
SMCR8-201ENST00000406438 PARP3Q9Y6F1 533 aa13.53□□□□□ -0.24
SMCR8-201ENST00000406438 RASA3Q14644 834 aa13.53□□□□□ -0.24
SMCR8-201ENST00000406438 TPTE2Q6XPS3 522 aa13.53□□□□□ -0.24
SMCR8-201ENST00000406438 BRAPQ7Z569 592 aa13.53□□□□□ -0.24
SMCR8-201ENST00000406438 AFAP1L2Q8N4X5 818 aa13.53□□□□□ -0.24
SMCR8-201ENST00000406438 ESYT1Q9BSJ8 1104 aa13.53□□□□□ -0.24
SMCR8-201ENST00000406438 FAM83GA6ND36 823 aa13.53□□□□□ -0.24
SMCR8-201ENST00000406438 TUBBP07437 444 aa13.53□□□□□ -0.24
SMCR8-201ENST00000406438 PARP1P09874 1014 aaKnown RBP13.53□□□□□ -0.24
SMCR8-201ENST00000406438 POLD1P28340 1107 aa13.53□□□□□ -0.24
SMCR8-201ENST00000406438 HDAC1Q13547 482 aaPredicted RBP13.53□□□□□ -0.24
SMCR8-201ENST00000406438 SH2D4AQ9H788 454 aa13.53□□□□□ -0.24
SMCR8-201ENST00000406438 CIB2O75838 187 aa13.52□□□□□ -0.24
SMCR8-201ENST00000406438 ADGBQ8N7X0 1667 aa13.52□□□□□ -0.24
SMCR8-201ENST00000406438 ACEP12821 1306 aa13.52□□□□□ -0.25
SMCR8-201ENST00000406438 RFX1P22670 979 aa13.52□□□□□ -0.25
SMCR8-201ENST00000406438 ARID4AP29374 1257 aaPredicted RBP13.52□□□□□ -0.25
SMCR8-201ENST00000406438 ATP11AP98196 1134 aa13.52□□□□□ -0.25
SMCR8-201ENST00000406438 CNGA4Q8IV77 575 aa13.52□□□□□ -0.25
SMCR8-201ENST00000406438 PROCA1Q8NCQ7 364 aaPredicted RBP13.52□□□□□ -0.25
SMCR8-201ENST00000406438 TRIM6Q9C030 488 aaPredicted RBP13.52□□□□□ -0.25
SMCR8-201ENST00000406438 ANKRD2Q9GZV1 360 aa13.52□□□□□ -0.25
SMCR8-201ENST00000406438 PPIP5K1Q6PFW1 1433 aa13.52□□□□□ -0.25
SMCR8-201ENST00000406438 NAP1L4Q99733 375 aaKnown RBP13.52□□□□□ -0.25
SMCR8-201ENST00000406438 LUC7L2Q9Y383 392 aaKnown RBP13.52□□□□□ -0.25
SMCR8-201ENST00000406438 NOLC1Q14978 699 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMCR8-201ENST00000406438 UAP1Q16222 522 aaPredicted RBP13.51□□□□□ -0.25
SMCR8-201ENST00000406438 KMT5BQ4FZB7 885 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 PPP1R9BQ96SB3 815 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 DNM1Q05193 864 aaKnown RBP13.51□□□□□ -0.25
SMCR8-201ENST00000406438 ITIH3Q06033 890 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 TYRO3Q06418 890 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 COPS6Q7L5N1 327 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 DACT1Q9NYF0 836 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 KDM5BQ9UGL1 1544 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 PPP1R2P41236 205 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 RAPGEF1Q13905 1077 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 CEP57Q86XR8 500 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 ABCC1P33527 1531 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 DUOX2Q9NRD8 1548 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 TTC41PQ6P2S7 1318 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 DAPK3O43293 454 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 RPUSD2Q8IZ73 545 aaKnown RBP13.51□□□□□ -0.25
SMCR8-201ENST00000406438 IQUBQ8NA54 791 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 RNF34Q969K3 372 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 CCNT1O60563 726 aaKnown RBP13.51□□□□□ -0.25
SMCR8-201ENST00000406438 BIRC2Q13490 618 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 CLUL1Q15846 466 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 SV2BQ7L1I2 683 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 DNAJC25Q9H1X3 360 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 NKIRAS1Q9NYS0 192 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 ERCC5P28715 1186 aaPredicted RBP13.51□□□□□ -0.25
SMCR8-201ENST00000406438 RAB3GAP1Q15042 981 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 GABPAQ06546 454 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 VWA3BQ502W6 1294 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 BRDTQ58F21 947 aaPredicted RBP13.51□□□□□ -0.25
SMCR8-201ENST00000406438 UBL4BQ8N7F7 174 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 ARHGAP45Q92619 1136 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 IFT74Q96LB3 600 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 VPS18Q9P253 973 aa13.51□□□□□ -0.25
SMCR8-201ENST00000406438 CACYBPQ9HB71 228 aaKnown RBP13.5□□□□□ -0.25
SMCR8-201ENST00000406438 LZTFL1Q9NQ48 299 aa13.5□□□□□ -0.25
SMCR8-201ENST00000406438 LACTBP83111 547 aaPredicted RBP13.5□□□□□ -0.25
SMCR8-201ENST00000406438 ZNF569Q5MCW4 686 aa13.5□□□□□ -0.25
SMCR8-201ENST00000406438 INTS8Q75QN2 995 aaKnown RBP13.5□□□□□ -0.25
SMCR8-201ENST00000406438 EYA3Q99504 573 aa13.5□□□□□ -0.25
SMCR8-201ENST00000406438 PDE1AP54750 535 aa13.5□□□□□ -0.25
SMCR8-201ENST00000406438 CUL4BQ13620 913 aa13.5□□□□□ -0.25
SMCR8-201ENST00000406438 CNNM4Q6P4Q7 775 aa13.5□□□□□ -0.25
SMCR8-201ENST00000406438 ARFGAP2Q8N6H7 521 aa13.5□□□□□ -0.25
SMCR8-201ENST00000406438 ZNF830Q96NB3 372 aaPredicted RBP13.5□□□□□ -0.25
SMCR8-201ENST00000406438 F13A1P00488 732 aa13.5□□□□□ -0.25
SMCR8-201ENST00000406438 KRT9P35527 623 aa13.5□□□□□ -0.25
SMCR8-201ENST00000406438 SP4Q02446 784 aa13.5□□□□□ -0.25
SMCR8-201ENST00000406438 DZIP3Q86Y13 1208 aaKnown RBP13.5□□□□□ -0.25
SMCR8-201ENST00000406438 MICALL1Q8N3F8 863 aa13.5□□□□□ -0.25
SMCR8-201ENST00000406438 ARHGEF10LQ9HCE6 1279 aa13.5□□□□□ -0.25
SMCR8-201ENST00000406438 STK24Q9Y6E0 443 aa13.5□□□□□ -0.25
SMCR8-201ENST00000406438 CALUO43852 315 aaPredicted RBP13.5□□□□□ -0.25
SMCR8-201ENST00000406438 CHRNA2Q15822 529 aa13.5□□□□□ -0.25
SMCR8-201ENST00000406438 FYB2Q5VWT5 728 aa13.5□□□□□ -0.25
SMCR8-201ENST00000406438 HDXQ7Z353 690 aa13.5□□□□□ -0.25
SMCR8-201ENST00000406438 NOD1Q9Y239 953 aa13.5□□□□□ -0.25
SMCR8-201ENST00000406438 NPHP3Q7Z494 1330 aa13.5□□□□□ -0.25
SMCR8-201ENST00000406438 SARNPP82979 210 aaKnown RBP13.5□□□□□ -0.25
SMCR8-201ENST00000406438 KSR2Q6VAB6 950 aa13.5□□□□□ -0.25
SMCR8-201ENST00000406438 CNGA1P29973 690 aa13.49□□□□□ -0.25
SMCR8-201ENST00000406438 FAM76AQ8TAV0 307 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms