RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 TESPA1A2RU30 521 aaPredicted RBP26.59■■□□□ 1.85
RHBDD3-202ENST00000406335 GTF2A2P52657 109 aa26.59■■□□□ 1.85
RHBDD3-202ENST00000406335 MAP3K9P80192 1104 aa26.59■■□□□ 1.85
RHBDD3-202ENST00000406335 TAF1CQ15572 869 aaPredicted RBP26.59■■□□□ 1.85
RHBDD3-202ENST00000406335 HABP4Q5JVS0 413 aaKnown RBP26.59■■□□□ 1.85
RHBDD3-202ENST00000406335 DZIP1LQ8IYY4 767 aaKnown RBP26.59■■□□□ 1.85
RHBDD3-202ENST00000406335 CCL15-CCL14A0A0B4J2E2 113 aa26.58■■□□□ 1.85
RHBDD3-202ENST00000406335 UBE4AQ14139 1066 aa26.58■■□□□ 1.85
RHBDD3-202ENST00000406335 CCL15Q16663 113 aa26.58■■□□□ 1.85
RHBDD3-202ENST00000406335 TDRD7Q8NHU6 1098 aaKnown RBP26.58■■□□□ 1.85
RHBDD3-202ENST00000406335 FAM205AQ6ZU69 1335 aa26.58■■□□□ 1.85
RHBDD3-202ENST00000406335 CRKP46108 304 aa26.57■■□□□ 1.84
RHBDD3-202ENST00000406335 SLC4A8Q2Y0W8 1093 aa26.57■■□□□ 1.84
RHBDD3-202ENST00000406335 ARMC5Q96C12 935 aa26.57■■□□□ 1.84
RHBDD3-202ENST00000406335 ZNF646O15015 1829 aaPredicted RBP26.57■■□□□ 1.84
RHBDD3-202ENST00000406335 CHAF1AQ13111 956 aaPredicted RBP26.56■■□□□ 1.84
RHBDD3-202ENST00000406335 SLC9C1Q4G0N8 1177 aa26.56■■□□□ 1.84
RHBDD3-202ENST00000406335 OTUD5Q96G74 571 aa26.56■■□□□ 1.84
RHBDD3-202ENST00000406335 TMEM39BQ9GZU3 492 aa26.56■■□□□ 1.84
RHBDD3-202ENST00000406335 MYCP01106 439 aaPredicted RBP26.55■■□□□ 1.84
RHBDD3-202ENST00000406335 CNKSR2Q8WXI2 1034 aa26.55■■□□□ 1.84
RHBDD3-202ENST00000406335 MS4A4AQ96JQ5 239 aa26.55■■□□□ 1.84
RHBDD3-202ENST00000406335 FAM84BQ96KN1 310 aaPredicted RBP26.55■■□□□ 1.84
RHBDD3-202ENST00000406335 VGLL4Q14135 290 aa26.54■■□□□ 1.84
RHBDD3-202ENST00000406335 KIF22Q14807 665 aa26.54■■□□□ 1.84
RHBDD3-202ENST00000406335 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.54■■□□□ 1.84
RHBDD3-202ENST00000406335 BRI3BPQ8WY22 251 aa26.54■■□□□ 1.84
RHBDD3-202ENST00000406335 SRCIN1Q9C0H9 1055 aa26.54■■□□□ 1.84
RHBDD3-202ENST00000406335 IQSEC3Q9UPP2 1182 aaPredicted RBP26.54■■□□□ 1.84
RHBDD3-202ENST00000406335 CAVIN4Q5BKX8 364 aa26.53■■□□□ 1.84
RHBDD3-202ENST00000406335 TMOD2Q9NZR1 351 aa26.53■■□□□ 1.84
RHBDD3-202ENST00000406335 ALDH1L1O75891 902 aa26.52■■□□□ 1.84
RHBDD3-202ENST00000406335 CDAN1Q8IWY9 1227 aa26.52■■□□□ 1.84
RHBDD3-202ENST00000406335 CDCA7LQ96GN5 454 aa26.52■■□□□ 1.84
RHBDD3-202ENST00000406335 TEPSINQ96N21 525 aa26.52■■□□□ 1.84
RHBDD3-202ENST00000406335 PUS3Q9BZE2 481 aaKnown RBP26.52■■□□□ 1.84
RHBDD3-202ENST00000406335 PTCH2Q9Y6C5 1203 aa26.52■■□□□ 1.84
RHBDD3-202ENST00000406335 MROH5Q6ZUA9 1318 aa26.51■■□□□ 1.83
RHBDD3-202ENST00000406335 E9PSI1 815 aa26.51■■□□□ 1.83
RHBDD3-202ENST00000406335 SLFN5Q08AF3 891 aa26.51■■□□□ 1.83
RHBDD3-202ENST00000406335 FAM43AQ8N2R8 423 aa26.5■■□□□ 1.83
RHBDD3-202ENST00000406335 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.5■■□□□ 1.83
RHBDD3-202ENST00000406335 TBC1D22AQ8WUA7 517 aa26.5■■□□□ 1.83
RHBDD3-202ENST00000406335 TEKT1Q969V4 418 aa26.5■■□□□ 1.83
RHBDD3-202ENST00000406335 ZNF333Q96JL9 665 aa26.5■■□□□ 1.83
RHBDD3-202ENST00000406335 CETPP11597 493 aa26.49■■□□□ 1.83
RHBDD3-202ENST00000406335 CACNB3P54284 484 aa26.49■■□□□ 1.83
RHBDD3-202ENST00000406335 METTL24Q5JXM2 366 aa26.49■■□□□ 1.83
RHBDD3-202ENST00000406335 DIEXFQ68CQ4 756 aaKnown RBP26.49■■□□□ 1.83
RHBDD3-202ENST00000406335 HOOK2Q96ED9 719 aa26.49■■□□□ 1.83
RHBDD3-202ENST00000406335 SUCLG2Q96I99 432 aa26.49■■□□□ 1.83
RHBDD3-202ENST00000406335 ECM2O94769 699 aaPredicted RBP26.48■■□□□ 1.83
RHBDD3-202ENST00000406335 CAP1Q01518 475 aa26.48■■□□□ 1.83
RHBDD3-202ENST00000406335 MIER1Q8N108 512 aa26.48■■□□□ 1.83
RHBDD3-202ENST00000406335 WRNIP1Q96S55 665 aa26.48■■□□□ 1.83
RHBDD3-202ENST00000406335 ERO1BQ86YB8 467 aa26.46■■□□□ 1.83
RHBDD3-202ENST00000406335 RIPOR2Q9Y4F9 1068 aa26.46■■□□□ 1.83
RHBDD3-202ENST00000406335 SPDYE5A6NIY4 337 aa26.45■■□□□ 1.82
RHBDD3-202ENST00000406335 HDLBPQ00341 1268 aaKnown RBP26.45■■□□□ 1.82
RHBDD3-202ENST00000406335 SNAPC2Q13487 334 aa26.45■■□□□ 1.82
RHBDD3-202ENST00000406335 GRIK5Q16478 980 aa26.45■■□□□ 1.82
RHBDD3-202ENST00000406335 FBXO33Q7Z6M2 555 aa26.45■■□□□ 1.82
RHBDD3-202ENST00000406335 ZKSCAN4Q969J2 545 aaPredicted RBP26.45■■□□□ 1.82
RHBDD3-202ENST00000406335 TLR2O60603 784 aa26.44■■□□□ 1.82
RHBDD3-202ENST00000406335 NBPF7P0C2Y1 421 aaPredicted RBP26.44■■□□□ 1.82
RHBDD3-202ENST00000406335 DCAF15Q66K64 600 aa26.44■■□□□ 1.82
RHBDD3-202ENST00000406335 SH3TC2Q8TF17 1288 aa26.44■■□□□ 1.82
RHBDD3-202ENST00000406335 LRRC24Q50LG9 513 aa26.43■■□□□ 1.82
RHBDD3-202ENST00000406335 TRMT2AQ8IZ69 625 aaKnown RBP26.43■■□□□ 1.82
RHBDD3-202ENST00000406335 MRPL50Q8N5N7 158 aaKnown RBP26.43■■□□□ 1.82
RHBDD3-202ENST00000406335 A0A1B0GUL6 1792 aa26.43■■□□□ 1.82
RHBDD3-202ENST00000406335 ECM29Q5VYK3 1845 aa26.42■■□□□ 1.82
RHBDD3-202ENST00000406335 BTBD19C9JJ37 291 aa26.42■■□□□ 1.82
RHBDD3-202ENST00000406335 ARHGAP39Q9C0H5 1083 aa26.42■■□□□ 1.82
RHBDD3-202ENST00000406335 BICC1Q9H694 974 aaKnown RBP26.42■■□□□ 1.82
RHBDD3-202ENST00000406335 SNCAIPQ9Y6H5 919 aa26.42■■□□□ 1.82
RHBDD3-202ENST00000406335 MAST3O60307 1309 aa26.41■■□□□ 1.82
RHBDD3-202ENST00000406335 IRF6O14896 467 aa26.41■■□□□ 1.82
RHBDD3-202ENST00000406335 BCAMP50895 628 aa26.41■■□□□ 1.82
RHBDD3-202ENST00000406335 LACTBP83111 547 aaPredicted RBP26.41■■□□□ 1.82
RHBDD3-202ENST00000406335 MIGA2Q7L4E1 593 aa26.41■■□□□ 1.82
RHBDD3-202ENST00000406335 ZDHHC15Q96MV8 337 aa26.41■■□□□ 1.82
RHBDD3-202ENST00000406335 PDE8BO95263 885 aa26.4■■□□□ 1.82
RHBDD3-202ENST00000406335 GNRH1P01148 92 aa26.4■■□□□ 1.82
RHBDD3-202ENST00000406335 IFIT1P09914 478 aaKnown RBP26.4■■□□□ 1.82
RHBDD3-202ENST00000406335 FAM83AQ86UY5 434 aa26.4■■□□□ 1.82
RHBDD3-202ENST00000406335 SSH1Q8WYL5 1049 aa26.4■■□□□ 1.82
RHBDD3-202ENST00000406335 KAZALD1Q96I82 304 aa26.4■■□□□ 1.82
RHBDD3-202ENST00000406335 ZNF341Q9BYN7 854 aa26.4■■□□□ 1.82
RHBDD3-202ENST00000406335 ZCCHC17Q9NP64 241 aaKnown RBP26.4■■□□□ 1.82
RHBDD3-202ENST00000406335 COLQQ9Y215 455 aaPredicted RBP26.4■■□□□ 1.82
RHBDD3-202ENST00000406335 PPIL2Q13356 520 aa26.39■■□□□ 1.82
RHBDD3-202ENST00000406335 HOXD10P28358 340 aa26.38■■□□□ 1.81
RHBDD3-202ENST00000406335 PRMT2P55345 433 aa26.38■■□□□ 1.81
RHBDD3-202ENST00000406335 MRIQ9BWK5 157 aa26.38■■□□□ 1.81
RHBDD3-202ENST00000406335 CPA4Q9UI42 421 aa26.38■■□□□ 1.81
RHBDD3-202ENST00000406335 FMNL1O95466 1100 aaPredicted RBP26.37■■□□□ 1.81
RHBDD3-202ENST00000406335 FXR1P51114 621 aaKnown RBP eCLIP26.37■■□□□ 1.81
RHBDD3-202ENST00000406335 PPATQ06203 517 aa26.37■■□□□ 1.81
RHBDD3-202ENST00000406335 APOBEC3HQ6NTF7 200 aaKnown RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms