RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 CYP8B1Q9UNU6 501 aa7.06□□□□□ -1.28
HMGB3P18-201ENST00000406327 ZBTB42B2RXF5 422 aa7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 F6X3S4 739 aa7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 J3QW42 95 aa7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 U2SURPO15042 1029 aaKnown RBP7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 TRPA1O75762 1119 aa7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 B3GALT4O96024 378 aa7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 ARAFP10398 606 aa7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 ADH6P28332 368 aa7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 ATP11AP98196 1134 aa7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 CTBSQ01459 385 aa7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 ELMSAN1Q6PJG2 1045 aa7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 FAM196AQ6ZSG2 479 aa7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 HFE2Q6ZVN8 426 aa7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 FAM35AQ86V20 835 aa7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 NKD1Q969G9 470 aa7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 PLD4Q96BZ4 506 aa7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 EAF1Q96JC9 268 aaPredicted RBP7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 HHIPQ96QV1 700 aa7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 SPOCK3Q9BQ16 436 aa7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 HCN2Q9UL51 889 aa7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 SLC6A14Q9UN76 642 aa7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 TLR6Q9Y2C9 796 aa7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 R3HCC1Q9Y3T6 440 aaKnown RBP7.05□□□□□ -1.28
HMGB3P18-201ENST00000406327 ADAMTS2O95450 1211 aa7.04□□□□□ -1.28
HMGB3P18-201ENST00000406327 MX2P20592 715 aa7.04□□□□□ -1.28
HMGB3P18-201ENST00000406327 NME2P22392 152 aa7.04□□□□□ -1.28
HMGB3P18-201ENST00000406327 MAP2K3P46734 347 aa7.04□□□□□ -1.28
HMGB3P18-201ENST00000406327 FAM160A1Q05DH4 1040 aa7.04□□□□□ -1.28
HMGB3P18-201ENST00000406327 PCDH1Q08174 1060 aa7.04□□□□□ -1.28
HMGB3P18-201ENST00000406327 CWF19L2Q2TBE0 894 aaKnown RBP7.04□□□□□ -1.28
HMGB3P18-201ENST00000406327 TNNI3KQ59H18 835 aa7.04□□□□□ -1.28
HMGB3P18-201ENST00000406327 POP1Q99575 1024 aaKnown RBP7.04□□□□□ -1.28
HMGB3P18-201ENST00000406327 LRRC3Q9BY71 257 aa7.04□□□□□ -1.28
HMGB3P18-201ENST00000406327 TRIM55Q9BYV6 548 aa7.04□□□□□ -1.28
HMGB3P18-201ENST00000406327 ENAMQ9NRM1 1142 aa7.04□□□□□ -1.28
HMGB3P18-201ENST00000406327 GINM1Q9NU53 330 aa7.04□□□□□ -1.28
HMGB3P18-201ENST00000406327 ADARB2-AS1A8MUL3 147 aa7.03□□□□□ -1.28
HMGB3P18-201ENST00000406327 BPNT1O95861 308 aa7.03□□□□□ -1.28
HMGB3P18-201ENST00000406327 CPB1P15086 417 aa7.03□□□□□ -1.28
HMGB3P18-201ENST00000406327 TFE3P19532 575 aaPredicted RBP7.03□□□□□ -1.28
HMGB3P18-201ENST00000406327 GARTP22102 1010 aa7.03□□□□□ -1.28
HMGB3P18-201ENST00000406327 FAAP100Q0VG06 881 aa7.03□□□□□ -1.28
HMGB3P18-201ENST00000406327 MPP2Q14168 576 aa7.03□□□□□ -1.28
HMGB3P18-201ENST00000406327 GIMAP6Q6P9H5 292 aa7.03□□□□□ -1.28
HMGB3P18-201ENST00000406327 LYPD4Q6UWN0 246 aa7.03□□□□□ -1.28
HMGB3P18-201ENST00000406327 SLITRK4Q8IW52 837 aa7.03□□□□□ -1.28
HMGB3P18-201ENST00000406327 MKL1Q969V6 931 aa7.03□□□□□ -1.28
HMGB3P18-201ENST00000406327 MRFAP1L1Q96HT8 127 aa7.03□□□□□ -1.28
HMGB3P18-201ENST00000406327 ADAM19Q9H013 955 aa7.03□□□□□ -1.28
HMGB3P18-201ENST00000406327 MUC3BQ9H195 1237 aa7.03□□□□□ -1.28
HMGB3P18-201ENST00000406327 SOX13Q9UN79 622 aa7.03□□□□□ -1.28
HMGB3P18-201ENST00000406327 CADPSQ9ULU8 1353 aa7.03□□□□□ -1.28
HMGB3P18-201ENST00000406327 GPR25O00155 361 aa7.02□□□□□ -1.29
HMGB3P18-201ENST00000406327 IMPDH2P12268 514 aa7.02□□□□□ -1.29
HMGB3P18-201ENST00000406327 ADH7P40394 386 aa7.02□□□□□ -1.29
HMGB3P18-201ENST00000406327 ZNF165P49910 485 aa7.02□□□□□ -1.29
HMGB3P18-201ENST00000406327 AP3B2Q13367 1082 aa7.02□□□□□ -1.29
HMGB3P18-201ENST00000406327 LLGL2Q6P1M3 1020 aa7.02□□□□□ -1.29
HMGB3P18-201ENST00000406327 SULF2Q8IWU5 870 aa7.02□□□□□ -1.29
HMGB3P18-201ENST00000406327 GATAD2BQ8WXI9 593 aa7.02□□□□□ -1.29
HMGB3P18-201ENST00000406327 TTC9Q92623 222 aa7.02□□□□□ -1.29
HMGB3P18-201ENST00000406327 DCAF5Q96JK2 942 aa7.02□□□□□ -1.29
HMGB3P18-201ENST00000406327 SRRTQ9BXP5 876 aaKnown RBP7.02□□□□□ -1.29
HMGB3P18-201ENST00000406327 ZNF408Q9H9D4 720 aa7.02□□□□□ -1.29
HMGB3P18-201ENST00000406327 UBP1Q9NZI7 540 aa7.02□□□□□ -1.29
HMGB3P18-201ENST00000406327 SIRPGQ9P1W8 387 aa7.02□□□□□ -1.29
HMGB3P18-201ENST00000406327 TLDC2A0PJX2 215 aa7.01□□□□□ -1.29
HMGB3P18-201ENST00000406327 ALAS2P22557 587 aa7.01□□□□□ -1.29
HMGB3P18-201ENST00000406327 PCBP4P57723 403 aaKnown RBP7.01□□□□□ -1.29
HMGB3P18-201ENST00000406327 SRSF11Q05519 484 aaKnown RBP7.01□□□□□ -1.29
HMGB3P18-201ENST00000406327 GALNT6Q8NCL4 622 aa7.01□□□□□ -1.29
HMGB3P18-201ENST00000406327 OR6P1Q8NGX9 317 aa7.01□□□□□ -1.29
HMGB3P18-201ENST00000406327 CRBNQ96SW2 442 aa7.01□□□□□ -1.29
HMGB3P18-201ENST00000406327 SMG9Q9H0W8 520 aaKnown RBP7.01□□□□□ -1.29
HMGB3P18-201ENST00000406327 PRKAG3Q9UGI9 489 aa7.01□□□□□ -1.29
HMGB3P18-201ENST00000406327 PAGE1O75459 146 aa7□□□□□ -1.29
HMGB3P18-201ENST00000406327 CELA2BP08218 269 aaPredicted RBP7□□□□□ -1.29
HMGB3P18-201ENST00000406327 ARNTP27540 789 aa7□□□□□ -1.29
HMGB3P18-201ENST00000406327 CDC27P30260 824 aa7□□□□□ -1.29
HMGB3P18-201ENST00000406327 ARL4DP49703 201 aa7□□□□□ -1.29
HMGB3P18-201ENST00000406327 IKBKEQ14164 716 aa7□□□□□ -1.29
HMGB3P18-201ENST00000406327 SEZ6Q53EL9 994 aa7□□□□□ -1.29
HMGB3P18-201ENST00000406327 PERM1Q5SV97 790 aa7□□□□□ -1.29
HMGB3P18-201ENST00000406327 ANKS3Q6ZW76 656 aa7□□□□□ -1.29
HMGB3P18-201ENST00000406327 REXO1Q8N1G1 1221 aaKnown RBP7□□□□□ -1.29
HMGB3P18-201ENST00000406327 PSMG3-AS1Q96PY0 264 aa7□□□□□ -1.29
HMGB3P18-201ENST00000406327 SOX17Q9H6I2 414 aaPredicted RBP7□□□□□ -1.29
HMGB3P18-201ENST00000406327 CBX8Q9HC52 389 aa7□□□□□ -1.29
HMGB3P18-201ENST00000406327 ELOA3CA0A087WX78 387 aaPredicted RBP6.99□□□□□ -1.29
HMGB3P18-201ENST00000406327 ELOA3DA6NLF2 546 aaPredicted RBP6.99□□□□□ -1.29
HMGB3P18-201ENST00000406327 H3BRJ5 948 aa6.99□□□□□ -1.29
HMGB3P18-201ENST00000406327 K7ELQ4 463 aaPredicted RBP6.99□□□□□ -1.29
HMGB3P18-201ENST00000406327 CLSTN1O94985 981 aa6.99□□□□□ -1.29
HMGB3P18-201ENST00000406327 F13A1P00488 732 aa6.99□□□□□ -1.29
HMGB3P18-201ENST00000406327 PROCP04070 461 aa6.99□□□□□ -1.29
HMGB3P18-201ENST00000406327 ITGB2P05107 769 aa6.99□□□□□ -1.29
HMGB3P18-201ENST00000406327 EIF6P56537 245 aaKnown RBP6.99□□□□□ -1.29
HMGB3P18-201ENST00000406327 BMS1Q14692 1282 aaKnown RBP6.99□□□□□ -1.29
HMGB3P18-201ENST00000406327 ELOA3BQ3SY89 546 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms