RNA–Protein interactions for RNA: ENST00000403538.1

TPT1P4-201, Transcript of tumor protein, translationally-controlled 1 pseudogene 4, humanhuman

BASIC

Gene TPT1P4, Length 519 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1P4-201ENST00000403538 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.07□□□□□ -0.64
TPT1P4-201ENST00000403538 PALD1Q9ULE6 856 aa11.07□□□□□ -0.64
TPT1P4-201ENST00000403538 CHMP3Q9Y3E7 222 aa11.07□□□□□ -0.64
TPT1P4-201ENST00000403538 RBM8AQ9Y5S9 174 aaKnown RBP11.07□□□□□ -0.64
TPT1P4-201ENST00000403538 LRP5O75197 1615 aa11.06□□□□□ -0.64
TPT1P4-201ENST00000403538 THSD7AQ9UPZ6 1657 aa11.06□□□□□ -0.64
TPT1P4-201ENST00000403538 RNF113AO15541 343 aaKnown RBP11.06□□□□□ -0.64
TPT1P4-201ENST00000403538 GDF9O60383 454 aa11.06□□□□□ -0.64
TPT1P4-201ENST00000403538 CAMTA2O94983 1202 aa11.06□□□□□ -0.64
TPT1P4-201ENST00000403538 PDE8BO95263 885 aa11.06□□□□□ -0.64
TPT1P4-201ENST00000403538 IFIT1P09914 478 aaKnown RBP11.06□□□□□ -0.64
TPT1P4-201ENST00000403538 ITGA6P23229 1130 aa11.06□□□□□ -0.64
TPT1P4-201ENST00000403538 KCNJ4P48050 445 aa11.06□□□□□ -0.64
TPT1P4-201ENST00000403538 KLHL40Q2TBA0 621 aa11.06□□□□□ -0.64
TPT1P4-201ENST00000403538 CCDC152Q4G0S7 254 aa11.06□□□□□ -0.64
TPT1P4-201ENST00000403538 SLC10A5Q5PT55 438 aa11.06□□□□□ -0.64
TPT1P4-201ENST00000403538 LDHAL6AQ6ZMR3 332 aa11.06□□□□□ -0.64
TPT1P4-201ENST00000403538 SYTL4Q96C24 671 aaPredicted RBP11.06□□□□□ -0.64
TPT1P4-201ENST00000403538 NGLY1Q96IV0 654 aa11.06□□□□□ -0.64
TPT1P4-201ENST00000403538 CDC5LQ99459 802 aaKnown RBP11.06□□□□□ -0.64
TPT1P4-201ENST00000403538 PDRG1Q9NUG6 133 aa11.06□□□□□ -0.64
TPT1P4-201ENST00000403538 TLR7Q9NYK1 1049 aaKnown RBP11.06□□□□□ -0.64
TPT1P4-201ENST00000403538 PCDHB3Q9Y5E6 796 aa11.06□□□□□ -0.64
TPT1P4-201ENST00000403538 WDR19Q8NEZ3 1342 aa11.06□□□□□ -0.64
TPT1P4-201ENST00000403538 CARMIL3Q8ND23 1372 aa11.05□□□□□ -0.64
TPT1P4-201ENST00000403538 MYH14Q7Z406 1995 aaKnown RBP11.05□□□□□ -0.64
TPT1P4-201ENST00000403538 SLC27A2O14975 620 aa11.05□□□□□ -0.64
TPT1P4-201ENST00000403538 BAG4O95429 457 aaKnown RBP11.05□□□□□ -0.64
TPT1P4-201ENST00000403538 PTH1RQ03431 593 aa11.05□□□□□ -0.64
TPT1P4-201ENST00000403538 E2F4Q16254 413 aa11.05□□□□□ -0.64
TPT1P4-201ENST00000403538 HLFQ16534 295 aa11.05□□□□□ -0.64
TPT1P4-201ENST00000403538 CSPP1Q1MSJ5 1256 aa11.05□□□□□ -0.64
TPT1P4-201ENST00000403538 GORABQ5T7V8 394 aa11.05□□□□□ -0.64
TPT1P4-201ENST00000403538 BLOC1S2Q6QNY1 142 aa11.05□□□□□ -0.64
TPT1P4-201ENST00000403538 LPIN2Q92539 896 aa11.05□□□□□ -0.64
TPT1P4-201ENST00000403538 FAM89AQ96GI7 184 aa11.05□□□□□ -0.64
TPT1P4-201ENST00000403538 NEUROD6Q96NK8 337 aa11.05□□□□□ -0.64
TPT1P4-201ENST00000403538 BCL11AQ9H165 835 aa11.05□□□□□ -0.64
TPT1P4-201ENST00000403538 IL25Q9H293 177 aa11.05□□□□□ -0.64
TPT1P4-201ENST00000403538 BCORQ6W2J9 1755 aa11.05□□□□□ -0.64
TPT1P4-201ENST00000403538 ARAP2Q8WZ64 1704 aa11.04□□□□□ -0.64
TPT1P4-201ENST00000403538 MYH7P12883 1935 aa11.04□□□□□ -0.64
TPT1P4-201ENST00000403538 A0A0D9SFI3 127 aa11.04□□□□□ -0.64
TPT1P4-201ENST00000403538 FAM187AA6NFU0 413 aa11.04□□□□□ -0.64
TPT1P4-201ENST00000403538 MAP4K4O95819 1239 aaPredicted RBP11.04□□□□□ -0.64
TPT1P4-201ENST00000403538 MBD3O95983 291 aa11.04□□□□□ -0.64
TPT1P4-201ENST00000403538 CASTP20810 708 aaKnown RBP11.04□□□□□ -0.64
TPT1P4-201ENST00000403538 ARID4AP29374 1257 aaPredicted RBP11.04□□□□□ -0.64
TPT1P4-201ENST00000403538 UBE3CQ15386 1083 aa11.04□□□□□ -0.64
TPT1P4-201ENST00000403538 SF3B3Q15393 1217 aaKnown RBP11.04□□□□□ -0.64
TPT1P4-201ENST00000403538 PUM3Q15397 648 aaKnown RBP11.04□□□□□ -0.64
TPT1P4-201ENST00000403538 ATP2B3Q16720 1220 aa11.04□□□□□ -0.64
TPT1P4-201ENST00000403538 LRRC24Q50LG9 513 aa11.04□□□□□ -0.64
TPT1P4-201ENST00000403538 PRPF40BQ6NWY9 871 aaKnown RBP11.04□□□□□ -0.64
TPT1P4-201ENST00000403538 VGLL2Q8N8G2 317 aa11.04□□□□□ -0.64
TPT1P4-201ENST00000403538 SPRYD3Q8NCJ5 442 aa11.04□□□□□ -0.64
TPT1P4-201ENST00000403538 XAGE2Q96GT9 111 aa11.04□□□□□ -0.64
TPT1P4-201ENST00000403538 FAM227BQ96M60 508 aa11.04□□□□□ -0.64
TPT1P4-201ENST00000403538 NYXQ9GZU5 481 aa11.04□□□□□ -0.64
TPT1P4-201ENST00000403538 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.04□□□□□ -0.64
TPT1P4-201ENST00000403538 ZMYM6O95789 1325 aa11.04□□□□□ -0.64
TPT1P4-201ENST00000403538 ATRNO75882 1429 aa11.03□□□□□ -0.64
TPT1P4-201ENST00000403538 RPS6KA4O75676 772 aa11.03□□□□□ -0.64
TPT1P4-201ENST00000403538 FGFR2P21802 821 aa11.03□□□□□ -0.64
TPT1P4-201ENST00000403538 OSBPP22059 807 aa11.03□□□□□ -0.64
TPT1P4-201ENST00000403538 RPS6KB1P23443 525 aa11.03□□□□□ -0.64
TPT1P4-201ENST00000403538 NT5C2P49902 561 aa11.03□□□□□ -0.64
TPT1P4-201ENST00000403538 AK2P54819 239 aa11.03□□□□□ -0.64
TPT1P4-201ENST00000403538 TIMM10P62072 90 aa11.03□□□□□ -0.64
TPT1P4-201ENST00000403538 METTL24Q5JXM2 366 aa11.03□□□□□ -0.64
TPT1P4-201ENST00000403538 TTC39AQ5SRH9 613 aa11.03□□□□□ -0.64
TPT1P4-201ENST00000403538 ZNF697Q5TEC3 545 aa11.03□□□□□ -0.64
TPT1P4-201ENST00000403538 LIAT1Q6ZQX7 453 aa11.03□□□□□ -0.64
TPT1P4-201ENST00000403538 JAKMIP1Q96N16 626 aaKnown RBP11.03□□□□□ -0.64
TPT1P4-201ENST00000403538 LLPHQ9BRT6 129 aaKnown RBP11.03□□□□□ -0.64
TPT1P4-201ENST00000403538 AGXT2Q9BYV1 514 aa11.03□□□□□ -0.64
TPT1P4-201ENST00000403538 AAASQ9NRG9 546 aa11.03□□□□□ -0.64
TPT1P4-201ENST00000403538 CNNM1Q9NRU3 951 aa11.03□□□□□ -0.64
TPT1P4-201ENST00000403538 CCDC9Q9Y3X0 531 aaKnown RBP11.03□□□□□ -0.64
TPT1P4-201ENST00000403538 KIF3AQ9Y496 699 aa11.03□□□□□ -0.64
TPT1P4-201ENST00000403538 NHSQ6T4R5 1651 aa11.03□□□□□ -0.64
TPT1P4-201ENST00000403538 AKAP11Q9UKA4 1901 aa11.02□□□□□ -0.65
TPT1P4-201ENST00000403538 FSD2A1L4K1 749 aa11.02□□□□□ -0.65
TPT1P4-201ENST00000403538 GRXCR2A6NFK2 248 aa11.02□□□□□ -0.65
TPT1P4-201ENST00000403538 NUTM2BA6NNL0 878 aaPredicted RBP11.02□□□□□ -0.65
TPT1P4-201ENST00000403538 NUTM2EB1AL46 878 aaPredicted RBP11.02□□□□□ -0.65
TPT1P4-201ENST00000403538 SLC5A1P13866 664 aa11.02□□□□□ -0.65
TPT1P4-201ENST00000403538 IGHMBP2P38935 993 aaKnown RBP11.02□□□□□ -0.65
TPT1P4-201ENST00000403538 NUTM2AQ8IVF1 878 aaPredicted RBP11.02□□□□□ -0.65
TPT1P4-201ENST00000403538 TMEM87AQ8NBN3 555 aa11.02□□□□□ -0.65
TPT1P4-201ENST00000403538 APPBP2Q92624 585 aa11.02□□□□□ -0.65
TPT1P4-201ENST00000403538 NEK1Q96PY6 1258 aa11.02□□□□□ -0.65
TPT1P4-201ENST00000403538 MTA3Q9BTC8 594 aa11.02□□□□□ -0.65
TPT1P4-201ENST00000403538 UPF3BQ9BZI7 483 aaKnown RBP11.02□□□□□ -0.65
TPT1P4-201ENST00000403538 CDHR5Q9HBB8 845 aa11.02□□□□□ -0.65
TPT1P4-201ENST00000403538 NARFQ9UHQ1 456 aa11.02□□□□□ -0.65
TPT1P4-201ENST00000403538 PDS5AQ29RF7 1337 aaKnown RBP11.02□□□□□ -0.65
TPT1P4-201ENST00000403538 UBN2Q6ZU65 1347 aa11.02□□□□□ -0.65
TPT1P4-201ENST00000403538 NTSR2O95665 410 aa11.01□□□□□ -0.65
TPT1P4-201ENST00000403538 MRE11P49959 708 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms