RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 SEC31AO94979 1220 aaKnown RBP16.65■□□□□ 0.26
RPRD1A-202ENST00000399022 STIM1Q13586 685 aa16.65■□□□□ 0.26
RPRD1A-202ENST00000399022 OTUD7BQ6GQQ9 843 aa16.65■□□□□ 0.26
RPRD1A-202ENST00000399022 JADE2Q9NQC1 790 aa16.65■□□□□ 0.26
RPRD1A-202ENST00000399022 YEATS4O95619 227 aa16.64■□□□□ 0.25
RPRD1A-202ENST00000399022 CHMP4BP1P59074 171 aa16.64■□□□□ 0.25
RPRD1A-202ENST00000399022 FANCCQ00597 558 aa16.64■□□□□ 0.25
RPRD1A-202ENST00000399022 CEP57Q86XR8 500 aa16.64■□□□□ 0.25
RPRD1A-202ENST00000399022 ZNF710Q8N1W2 664 aa16.64■□□□□ 0.25
RPRD1A-202ENST00000399022 IRS4O14654 1257 aaPredicted RBP16.64■□□□□ 0.25
RPRD1A-202ENST00000399022 ZBTB43O43298 467 aa16.64■□□□□ 0.25
RPRD1A-202ENST00000399022 ARHGEF25Q86VW2 580 aa16.64■□□□□ 0.25
RPRD1A-202ENST00000399022 OTUD6BQ8N6M0 293 aa16.64■□□□□ 0.25
RPRD1A-202ENST00000399022 CCDC196A0A1B0GTZ2 297 aa16.64■□□□□ 0.25
RPRD1A-202ENST00000399022 TTLL7Q6ZT98 887 aa16.64■□□□□ 0.25
RPRD1A-202ENST00000399022 TAX1BP1Q86VP1 789 aa16.64■□□□□ 0.25
RPRD1A-202ENST00000399022 IMPACTQ9P2X3 320 aa16.64■□□□□ 0.25
RPRD1A-202ENST00000399022 INO80Q9ULG1 1556 aaPredicted RBP16.64■□□□□ 0.25
RPRD1A-202ENST00000399022 N4BP3O15049 544 aa16.63■□□□□ 0.25
RPRD1A-202ENST00000399022 PHKG2P15735 406 aa16.63■□□□□ 0.25
RPRD1A-202ENST00000399022 PAFAH1B1P43034 410 aa16.63■□□□□ 0.25
RPRD1A-202ENST00000399022 IQCA1Q86XH1 822 aa16.63■□□□□ 0.25
RPRD1A-202ENST00000399022 SPA17Q15506 151 aa16.63■□□□□ 0.25
RPRD1A-202ENST00000399022 GBP6Q6ZN66 633 aa16.63■□□□□ 0.25
RPRD1A-202ENST00000399022 KBTBD3Q8NAB2 608 aa16.63■□□□□ 0.25
RPRD1A-202ENST00000399022 MRFAP1L1Q96HT8 127 aa16.63■□□□□ 0.25
RPRD1A-202ENST00000399022 DZIP3Q86Y13 1208 aaKnown RBP16.63■□□□□ 0.25
RPRD1A-202ENST00000399022 BCCIPQ9P287 314 aaKnown RBP eCLIP16.63■□□□□ 0.25
RPRD1A-202ENST00000399022 MYL5Q02045 173 aa16.62■□□□□ 0.25
RPRD1A-202ENST00000399022 ATRIPQ8WXE1 791 aa16.62■□□□□ 0.25
RPRD1A-202ENST00000399022 RGS12O14924 1447 aa16.62■□□□□ 0.25
RPRD1A-202ENST00000399022 LMTK2Q8IWU2 1503 aa16.62■□□□□ 0.25
RPRD1A-202ENST00000399022 CLCN6P51797 869 aa16.62■□□□□ 0.25
RPRD1A-202ENST00000399022 DNAJC10Q8IXB1 793 aa16.62■□□□□ 0.25
RPRD1A-202ENST00000399022 ZEB2O60315 1214 aa16.62■□□□□ 0.25
RPRD1A-202ENST00000399022 KMT5BQ4FZB7 885 aa16.62■□□□□ 0.25
RPRD1A-202ENST00000399022 MIGA1Q8NAN2 632 aa16.62■□□□□ 0.25
RPRD1A-202ENST00000399022 TDRD7Q8NHU6 1098 aaKnown RBP16.62■□□□□ 0.25
RPRD1A-202ENST00000399022 LSG1Q9H089 658 aaKnown RBP16.62■□□□□ 0.25
RPRD1A-202ENST00000399022 TPCN1Q9ULQ1 816 aa16.62■□□□□ 0.25
RPRD1A-202ENST00000399022 IQGAP1P46940 1657 aa16.62■□□□□ 0.25
RPRD1A-202ENST00000399022 CYP2E1P05181 493 aaPredicted RBP16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 EPS15P42566 896 aa16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 USP5P45974 858 aa16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 CTCFLQ8NI51 663 aaPredicted RBP16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 ELP1O95163 1332 aa16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 PCDH11XQ9BZA7 1347 aa16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 PCDH11YQ9BZA8 1340 aa16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 PTPRMP28827 1452 aa16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 UQCRFS1P1P0C7P4 283 aa16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 ARID5BQ14865 1188 aa16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 KDRP35968 1356 aa16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 A0A087WWV3 80 aa16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 ATP6V1AP38606 617 aa16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 GPR161Q8N6U8 529 aaKnown RBP16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 CDK5RAP3Q96JB5 506 aa16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 RNF41Q9H4P4 317 aaPredicted RBP16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 MKNK2Q9HBH9 465 aa16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 RRP15Q9Y3B9 282 aaKnown RBP16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 SLC4A4Q9Y6R1 1079 aa16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 ZPR1O75312 459 aa16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 CYP7A1P22680 504 aa16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 DZIP1Q86YF9 867 aaKnown RBP16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 AFAP1L1Q8TED9 768 aa16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 CAPZA3Q96KX2 299 aa16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 BTG4Q9NY30 223 aa16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 ANKIB1Q9P2G1 1089 aa16.61■□□□□ 0.25
RPRD1A-202ENST00000399022 GBP2P32456 591 aaPredicted RBP16.6■□□□□ 0.25
RPRD1A-202ENST00000399022 TANGO6Q9C0B7 1094 aa16.6■□□□□ 0.25
RPRD1A-202ENST00000399022 NIP7Q9Y221 180 aaKnown RBP eCLIP16.6■□□□□ 0.25
RPRD1A-202ENST00000399022 ARHGEF40Q8TER5 1519 aa16.6■□□□□ 0.25
RPRD1A-202ENST00000399022 GOLGA5Q8TBA6 731 aa16.6■□□□□ 0.25
RPRD1A-202ENST00000399022 XAGE2Q96GT9 111 aa16.6■□□□□ 0.25
RPRD1A-202ENST00000399022 MYCBPQ99417 103 aaPredicted RBP16.6■□□□□ 0.25
RPRD1A-202ENST00000399022 PNMA6AP0CW24 399 aaPredicted RBP16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 ATP5JP18859 108 aa16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 DDIT3P35638 169 aa16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 WTAPQ15007 396 aa16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 FAM76AQ8TAV0 307 aa16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 CDC5LQ99459 802 aaKnown RBP16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 LUC7LQ9NQ29 371 aaKnown RBP16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 CEP131Q9UPN4 1083 aa16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 MORC2Q9Y6X9 1032 aaPredicted RBP16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 CPSF1Q10570 1443 aaKnown RBP16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 ZKSCAN3Q9BRR0 538 aa16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 GUCA1BQ9UMX6 200 aa16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 KIDINS220Q9ULH0 1771 aa16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 HLTFQ14527 1009 aaKnown RBP eCLIP16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 SOGA3Q5TF21 947 aa16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 MYO6Q9UM54 1294 aa16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 EFCAB8A8MWE9 144 aa16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 ARHGAP6O43182 974 aa16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 ERLIN2O94905 339 aa16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 ITGA6P23229 1130 aa16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 MAATS1Q7Z4T9 603 aa16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 MAGEB6Q8N7X4 407 aa16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 TM6SF1Q9BZW5 370 aa16.59■□□□□ 0.25
RPRD1A-202ENST00000399022 STX17P56962 302 aa16.58■□□□□ 0.25
RPRD1A-202ENST00000399022 HSF2BPO75031 334 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms