RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 SLC45A1Q9Y2W3 748 aa8.31□□□□□ -1.08
SMCO1-201ENST00000397537 NUB1Q9Y5A7 615 aa8.31□□□□□ -1.08
SMCO1-201ENST00000397537 ABCC2Q92887 1545 aa8.31□□□□□ -1.08
SMCO1-201ENST00000397537 KLRG2A4D1S0 409 aaPredicted RBP8.3□□□□□ -1.08
SMCO1-201ENST00000397537 HOXB3P14651 431 aaPredicted RBP8.3□□□□□ -1.08
SMCO1-201ENST00000397537 EPHA4P54764 986 aa8.3□□□□□ -1.08
SMCO1-201ENST00000397537 PTPRNQ16849 979 aa8.3□□□□□ -1.08
SMCO1-201ENST00000397537 ERFEQ4G0M1 354 aa8.3□□□□□ -1.08
SMCO1-201ENST00000397537 PERM1Q5SV97 790 aa8.3□□□□□ -1.08
SMCO1-201ENST00000397537 RNF19BQ6ZMZ0 732 aa8.3□□□□□ -1.08
SMCO1-201ENST00000397537 ENAHQ8N8S7 591 aaPredicted RBP8.3□□□□□ -1.08
SMCO1-201ENST00000397537 TSPAN18Q96SJ8 248 aa8.3□□□□□ -1.08
SMCO1-201ENST00000397537 TRIM56Q9BRZ2 755 aaKnown RBP8.3□□□□□ -1.08
SMCO1-201ENST00000397537 OBP2AQ9NY56 170 aa8.3□□□□□ -1.08
SMCO1-201ENST00000397537 IPPQ9Y573 584 aa8.3□□□□□ -1.08
SMCO1-201ENST00000397537 BICDL2A1A5D9 508 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 CPNE3O75131 537 aaKnown RBP8.29□□□□□ -1.08
SMCO1-201ENST00000397537 TNFRSF21O75509 655 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 EYA4O95677 639 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 RBP3P10745 1247 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 DOK7Q18PE1 504 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 ARSIQ5FYB1 569 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 FBXL19Q6PCT2 694 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 ZBTB33Q86T24 672 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 VPS37AQ8NEZ2 397 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 GPR101Q96P66 508 aaPredicted RBP8.29□□□□□ -1.08
SMCO1-201ENST00000397537 SELENOOQ9BVL4 669 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 CCDC8Q9H0W5 538 aaPredicted RBP8.29□□□□□ -1.08
SMCO1-201ENST00000397537 AKAP2Q9Y2D5 859 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 RABGAP1Q9Y3P9 1069 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 PCDHB11Q9Y5F2 797 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 VSTM5A8MXK1 200 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 ST18O60284 1047 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 NUDT7P0C024 238 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 SETDB1Q15047 1291 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 ETFBKMTQ8IXQ9 262 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 PPHLN1Q8NEY8 458 aaKnown RBP8.29□□□□□ -1.08
SMCO1-201ENST00000397537 PJA1Q8NG27 643 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 SKA1Q96BD8 255 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 ALDH8A1Q9H2A2 487 aaPredicted RBP8.29□□□□□ -1.08
SMCO1-201ENST00000397537 AASDHPPTQ9NRN7 309 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 ACTR10Q9NZ32 417 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 UBP1Q9NZI7 540 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 EVLQ9UI08 416 aaPredicted RBP8.29□□□□□ -1.08
SMCO1-201ENST00000397537 ZNF180Q9UJW8 692 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 PPT2Q9UMR5 302 aa8.29□□□□□ -1.08
SMCO1-201ENST00000397537 MADDQ8WXG6 1647 aa8.28□□□□□ -1.08
SMCO1-201ENST00000397537 A6NHS1 94 aa8.28□□□□□ -1.08
SMCO1-201ENST00000397537 RASSF10A6NK89 507 aa8.28□□□□□ -1.08
SMCO1-201ENST00000397537 GSG1L2A8MUP6 293 aa8.28□□□□□ -1.08
SMCO1-201ENST00000397537 NBNO60934 754 aa8.28□□□□□ -1.08
SMCO1-201ENST00000397537 NBPF7P0C2Y1 421 aaPredicted RBP8.28□□□□□ -1.08
SMCO1-201ENST00000397537 PICALMQ13492 652 aa8.28□□□□□ -1.08
SMCO1-201ENST00000397537 CBX2Q14781 532 aaPredicted RBP8.28□□□□□ -1.08
SMCO1-201ENST00000397537 KRT77Q7Z794 578 aa8.28□□□□□ -1.08
SMCO1-201ENST00000397537 STRA8Q7Z7C7 330 aa8.28□□□□□ -1.08
SMCO1-201ENST00000397537 STRBPQ96SI9 672 aaKnown RBP8.28□□□□□ -1.08
SMCO1-201ENST00000397537 SARGQ9BW04 601 aa8.28□□□□□ -1.08
SMCO1-201ENST00000397537 LGR6Q9HBX8 967 aa8.28□□□□□ -1.08
SMCO1-201ENST00000397537 RUSC2Q8N2Y8 1516 aa8.28□□□□□ -1.08
SMCO1-201ENST00000397537 PGRP06401 933 aa8.27□□□□□ -1.09
SMCO1-201ENST00000397537 GBP2P32456 591 aaPredicted RBP8.27□□□□□ -1.09
SMCO1-201ENST00000397537 DGKGP49619 791 aa8.27□□□□□ -1.09
SMCO1-201ENST00000397537 NBPF20Q3BBV1 942 aa8.27□□□□□ -1.09
SMCO1-201ENST00000397537 HYIQ5T013 277 aa8.27□□□□□ -1.09
SMCO1-201ENST00000397537 NBPF14Q5TI25 921 aa8.27□□□□□ -1.09
SMCO1-201ENST00000397537 WWC2Q6AWC2 1192 aa8.27□□□□□ -1.09
SMCO1-201ENST00000397537 NXPE4Q6UWF7 544 aa8.27□□□□□ -1.09
SMCO1-201ENST00000397537 ARMC2Q8NEN0 867 aa8.27□□□□□ -1.09
SMCO1-201ENST00000397537 CCDC74AQ96AQ1 378 aa8.27□□□□□ -1.09
SMCO1-201ENST00000397537 MPP4Q96JB8 637 aa8.27□□□□□ -1.09
SMCO1-201ENST00000397537 TMEM74Q96NL1 305 aa8.27□□□□□ -1.09
SMCO1-201ENST00000397537 USB1Q9BQ65 265 aaKnown RBP8.27□□□□□ -1.09
SMCO1-201ENST00000397537 HERPUD2Q9BSE4 406 aa8.27□□□□□ -1.09
SMCO1-201ENST00000397537 YIPF4Q9BSR8 244 aa8.27□□□□□ -1.09
SMCO1-201ENST00000397537 C2orf49Q9BVC5 232 aaPredicted RBP8.27□□□□□ -1.09
SMCO1-201ENST00000397537 MED1Q15648 1581 aaPredicted RBP8.27□□□□□ -1.09
SMCO1-201ENST00000397537 BCORL1Q5H9F3 1711 aa8.27□□□□□ -1.09
SMCO1-201ENST00000397537 E2F8A0AVK6 867 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 RIMBP2O15034 1052 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 STAU1O95793 577 aaKnown RBP8.26□□□□□ -1.09
SMCO1-201ENST00000397537 TGFB3P10600 412 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 BCAMP50895 628 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 MAP3K10Q02779 954 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 NEUROD1Q13562 356 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 BLOC1S3Q6QNY0 202 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 SNRNP27Q8WVK2 155 aaKnown RBP8.26□□□□□ -1.09
SMCO1-201ENST00000397537 ATXN2LQ8WWM7 1075 aaKnown RBP8.26□□□□□ -1.09
SMCO1-201ENST00000397537 MTMR8Q96EF0 704 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 RHOBTB2Q9BYZ6 727 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 GGNBP2Q9H3C7 697 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 KCNQ5Q9NR82 932 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 ZMYM5Q9UJ78 669 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 FBXO2Q9UK22 296 aaPredicted RBP8.26□□□□□ -1.09
SMCO1-201ENST00000397537 SETD1BQ9UPS6 1966 aaKnown RBP8.26□□□□□ -1.09
SMCO1-201ENST00000397537 IQSEC2Q5JU85 1478 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 hCG_1984214I3L0E3 225 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 PPP1R12BO60237 982 aaPredicted RBP8.26□□□□□ -1.09
SMCO1-201ENST00000397537 PABPC4Q13310 644 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMCO1-201ENST00000397537 CNGB1Q14028 1251 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms