RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 CRHR2Q13324 411 aa15.07■□□□□ 0
SYNE4-203ENST00000397428 ERO1AQ96HE7 468 aa15.07■□□□□ 0
SYNE4-203ENST00000397428 PTPN22Q9Y2R2 807 aa15.07■□□□□ 0
SYNE4-203ENST00000397428 GRIK5Q16478 980 aa15.06■□□□□ 0
SYNE4-203ENST00000397428 OPTNQ96CV9 577 aa15.06■□□□□ 0
SYNE4-203ENST00000397428 PDE4DIPQ5VU43 2346 aa15.06■□□□□ 0
SYNE4-203ENST00000397428 PDE8BO95263 885 aa15.05■□□□□ -0
SYNE4-203ENST00000397428 MAP3K9P80192 1104 aa15.05■□□□□ -0
SYNE4-203ENST00000397428 CAP1Q01518 475 aa15.05■□□□□ -0
SYNE4-203ENST00000397428 SP3Q02447 781 aa15.05■□□□□ -0
SYNE4-203ENST00000397428 LRRC24Q50LG9 513 aa15.05■□□□□ -0
SYNE4-203ENST00000397428 CDAN1Q8IWY9 1227 aa15.05■□□□□ -0
SYNE4-203ENST00000397428 ANKRD44Q8N8A2 993 aa15.05■□□□□ -0
SYNE4-203ENST00000397428 VGLL2Q8N8G2 317 aa15.05■□□□□ -0
SYNE4-203ENST00000397428 ELP3Q9H9T3 547 aa15.05■□□□□ -0
SYNE4-203ENST00000397428 HTTP42858 3142 aa15.04■□□□□ -0
SYNE4-203ENST00000397428 ZNF521Q96K83 1311 aa15.04■□□□□ -0
SYNE4-203ENST00000397428 TCP10L2B9ZVM9 353 aa15.04■□□□□ -0
SYNE4-203ENST00000397428 TNNI2P48788 182 aa15.04■□□□□ -0
SYNE4-203ENST00000397428 MRPL50Q8N5N7 158 aaKnown RBP15.04■□□□□ -0
SYNE4-203ENST00000397428 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.04■□□□□ -0
SYNE4-203ENST00000397428 CD99L2Q8TCZ2 262 aa15.04■□□□□ -0
SYNE4-203ENST00000397428 ARMC5Q96C12 935 aa15.04■□□□□ -0
SYNE4-203ENST00000397428 TMEM39BQ9GZU3 492 aa15.04■□□□□ -0
SYNE4-203ENST00000397428 BICC1Q9H694 974 aaKnown RBP15.04■□□□□ -0
SYNE4-203ENST00000397428 POTEFA5A3E0 1075 aa15.03■□□□□ -0
SYNE4-203ENST00000397428 GTF2A2P52657 109 aa15.03■□□□□ -0
SYNE4-203ENST00000397428 CAVIN4Q5BKX8 364 aa15.03■□□□□ -0
SYNE4-203ENST00000397428 TBC1D22AQ8WUA7 517 aa15.03■□□□□ -0
SYNE4-203ENST00000397428 CNKSR2Q8WXI2 1034 aa15.03■□□□□ -0
SYNE4-203ENST00000397428 BRI3BPQ8WY22 251 aa15.03■□□□□ -0
SYNE4-203ENST00000397428 ZDHHC15Q96MV8 337 aa15.03■□□□□ -0
SYNE4-203ENST00000397428 USP44Q9H0E7 712 aa15.03■□□□□ -0
SYNE4-203ENST00000397428 EFCC1Q9HA90 598 aa15.03■□□□□ -0
SYNE4-203ENST00000397428 BCAMP50895 628 aa15.02■□□□□ -0
SYNE4-203ENST00000397428 VGLL4Q14135 290 aa15.02■□□□□ -0
SYNE4-203ENST00000397428 METTL24Q5JXM2 366 aa15.02■□□□□ -0
SYNE4-203ENST00000397428 FKBP1CQ5VVH2 108 aa15.02■□□□□ -0
SYNE4-203ENST00000397428 FAM83AQ86UY5 434 aa15.02■□□□□ -0
SYNE4-203ENST00000397428 VPS37DQ86XT2 251 aa15.02■□□□□ -0
SYNE4-203ENST00000397428 FAM9BQ8IZU0 186 aa15.02■□□□□ -0
SYNE4-203ENST00000397428 IQSEC3Q9UPP2 1182 aaPredicted RBP15.02■□□□□ -0
SYNE4-203ENST00000397428 SUGT1Q9Y2Z0 365 aa15.02■□□□□ -0
SYNE4-203ENST00000397428 ZNF316A6NFI3 1004 aaPredicted RBP15.01□□□□□ -0.01
SYNE4-203ENST00000397428 FGFR2P21802 821 aa15.01□□□□□ -0.01
SYNE4-203ENST00000397428 APOBEC3HQ6NTF7 200 aaKnown RBP15.01□□□□□ -0.01
SYNE4-203ENST00000397428 TEKT1Q969V4 418 aa15.01□□□□□ -0.01
SYNE4-203ENST00000397428 PTPRCP08575 1304 aa15□□□□□ -0.01
SYNE4-203ENST00000397428 KIF16BQ96L93 1317 aa15□□□□□ -0.01
SYNE4-203ENST00000397428 CCL15-CCL14A0A0B4J2E2 113 aa15□□□□□ -0.01
SYNE4-203ENST00000397428 SPDYE5A6NIY4 337 aa15□□□□□ -0.01
SYNE4-203ENST00000397428 CHAF1AQ13111 956 aaPredicted RBP15□□□□□ -0.01
SYNE4-203ENST00000397428 ARHGEF6Q15052 776 aa15□□□□□ -0.01
SYNE4-203ENST00000397428 CCL15Q16663 113 aa15□□□□□ -0.01
SYNE4-203ENST00000397428 HHIPL2Q6UWX4 724 aa15□□□□□ -0.01
SYNE4-203ENST00000397428 FAM43AQ8N2R8 423 aa15□□□□□ -0.01
SYNE4-203ENST00000397428 ZFYVE28Q9HCC9 887 aa15□□□□□ -0.01
SYNE4-203ENST00000397428 CSADQ9Y600 493 aa15□□□□□ -0.01
SYNE4-203ENST00000397428 OTOFQ9HC10 1997 aa15□□□□□ -0.01
SYNE4-203ENST00000397428 FRAT2O75474 233 aaPredicted RBP14.99□□□□□ -0.01
SYNE4-203ENST00000397428 RFX5P48382 616 aaPredicted RBP14.99□□□□□ -0.01
SYNE4-203ENST00000397428 CACNB3P54284 484 aa14.99□□□□□ -0.01
SYNE4-203ENST00000397428 ERO1BQ86YB8 467 aa14.99□□□□□ -0.01
SYNE4-203ENST00000397428 KLHDC4Q8TBB5 520 aa14.99□□□□□ -0.01
SYNE4-203ENST00000397428 ZCCHC17Q9NP64 241 aaKnown RBP14.99□□□□□ -0.01
SYNE4-203ENST00000397428 SNCAIPQ9Y6H5 919 aa14.99□□□□□ -0.01
SYNE4-203ENST00000397428 ARAP2Q8WZ64 1704 aa14.99□□□□□ -0.01
SYNE4-203ENST00000397428 CETPP11597 493 aa14.98□□□□□ -0.01
SYNE4-203ENST00000397428 EN2P19622 333 aaPredicted RBP14.98□□□□□ -0.01
SYNE4-203ENST00000397428 TAF1CQ15572 869 aaPredicted RBP14.98□□□□□ -0.01
SYNE4-203ENST00000397428 SSH1Q8WYL5 1049 aa14.98□□□□□ -0.01
SYNE4-203ENST00000397428 ZKSCAN4Q969J2 545 aaPredicted RBP14.98□□□□□ -0.01
SYNE4-203ENST00000397428 HOOK2Q96ED9 719 aa14.98□□□□□ -0.01
SYNE4-203ENST00000397428 OTUD5Q96G74 571 aa14.98□□□□□ -0.01
SYNE4-203ENST00000397428 EYA2O00167 538 aa14.97□□□□□ -0.01
SYNE4-203ENST00000397428 TLR2O60603 784 aa14.97□□□□□ -0.01
SYNE4-203ENST00000397428 IFIT1P09914 478 aaKnown RBP14.97□□□□□ -0.01
SYNE4-203ENST00000397428 PUM3Q15397 648 aaKnown RBP14.97□□□□□ -0.01
SYNE4-203ENST00000397428 GCC1Q96CN9 775 aa14.97□□□□□ -0.01
SYNE4-203ENST00000397428 ZNF333Q96JL9 665 aa14.97□□□□□ -0.01
SYNE4-203ENST00000397428 RBBP6Q7Z6E9 1792 aaKnown RBP14.97□□□□□ -0.01
SYNE4-203ENST00000397428 MAST3O60307 1309 aa14.96□□□□□ -0.01
SYNE4-203ENST00000397428 BTBD19C9JJ37 291 aa14.96□□□□□ -0.01
SYNE4-203ENST00000397428 IRF6O14896 467 aa14.96□□□□□ -0.01
SYNE4-203ENST00000397428 ZEB1P37275 1124 aaPredicted RBP14.96□□□□□ -0.01
SYNE4-203ENST00000397428 CENPFP49454 3210 aa14.96□□□□□ -0.01
SYNE4-203ENST00000397428 ATG9AQ7Z3C6 839 aa14.96□□□□□ -0.01
SYNE4-203ENST00000397428 NBPF11Q86T75 865 aa14.96□□□□□ -0.01
SYNE4-203ENST00000397428 WDR66Q8TBY9 1149 aa14.96□□□□□ -0.01
SYNE4-203ENST00000397428 TMOD2Q9NZR1 351 aa14.96□□□□□ -0.01
SYNE4-203ENST00000397428 ZNF112Q9UJU3 913 aa14.96□□□□□ -0.01
SYNE4-203ENST00000397428 PPATQ06203 517 aa14.95□□□□□ -0.02
SYNE4-203ENST00000397428 SLFN5Q08AF3 891 aa14.95□□□□□ -0.02
SYNE4-203ENST00000397428 PPIL2Q13356 520 aa14.95□□□□□ -0.02
SYNE4-203ENST00000397428 SNAPC2Q13487 334 aa14.95□□□□□ -0.02
SYNE4-203ENST00000397428 FAM151AQ8WW52 585 aa14.95□□□□□ -0.02
SYNE4-203ENST00000397428 LPIN2Q92539 896 aa14.95□□□□□ -0.02
SYNE4-203ENST00000397428 WRNIP1Q96S55 665 aa14.95□□□□□ -0.02
SYNE4-203ENST00000397428 TMEM106CQ9BVX2 250 aa14.95□□□□□ -0.02
SYNE4-203ENST00000397428 PTCH2Q9Y6C5 1203 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms