RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 LDHCP07864 332 aa16.28■□□□□ 0.2
MCF2L-209ENST00000397036 ZKSCAN1P17029 563 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-209ENST00000397036 CYP7A1P22680 504 aa16.28■□□□□ 0.2
MCF2L-209ENST00000397036 GSTO1P78417 241 aa16.28■□□□□ 0.2
MCF2L-209ENST00000397036 MECOMQ03112 1051 aa16.28■□□□□ 0.2
MCF2L-209ENST00000397036 CREB3L3Q68CJ9 461 aa16.28■□□□□ 0.2
MCF2L-209ENST00000397036 CERS3Q8IU89 383 aa16.28■□□□□ 0.2
MCF2L-209ENST00000397036 PIAS4Q8N2W9 510 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-209ENST00000397036 ZNF384Q8TF68 577 aa16.28■□□□□ 0.2
MCF2L-209ENST00000397036 AIDAQ96BJ3 306 aa16.28■□□□□ 0.2
MCF2L-209ENST00000397036 KIAA1551Q9HCM1 1747 aa16.27■□□□□ 0.2
MCF2L-209ENST00000397036 PATL2C9JE40 543 aaKnown RBP16.27■□□□□ 0.2
MCF2L-209ENST00000397036 PRDX5P30044 214 aa16.27■□□□□ 0.2
MCF2L-209ENST00000397036 STRIP1Q5VSL9 837 aa16.27■□□□□ 0.2
MCF2L-209ENST00000397036 MRIQ9BWK5 157 aa16.27■□□□□ 0.2
MCF2L-209ENST00000397036 PALD1Q9ULE6 856 aa16.27■□□□□ 0.2
MCF2L-209ENST00000397036 SNX14Q9Y5W7 946 aa16.27■□□□□ 0.2
MCF2L-209ENST00000397036 ZMYM6O95789 1325 aa16.27■□□□□ 0.19
MCF2L-209ENST00000397036 MYH7P12883 1935 aa16.26■□□□□ 0.19
MCF2L-209ENST00000397036 G3V3G9 751 aa16.26■□□□□ 0.19
MCF2L-209ENST00000397036 SLC27A2O14975 620 aa16.26■□□□□ 0.19
MCF2L-209ENST00000397036 FOXP2O15409 715 aa16.26■□□□□ 0.19
MCF2L-209ENST00000397036 PPP4CP60510 307 aa16.26■□□□□ 0.19
MCF2L-209ENST00000397036 BECN1Q14457 450 aa16.26■□□□□ 0.19
MCF2L-209ENST00000397036 KRT32Q14532 448 aa16.26■□□□□ 0.19
MCF2L-209ENST00000397036 DCAF8Q5TAQ9 597 aa16.26■□□□□ 0.19
MCF2L-209ENST00000397036 TTLL5Q6EMB2 1281 aa16.26■□□□□ 0.19
MCF2L-209ENST00000397036 SLF2Q8IX21 1173 aa16.26■□□□□ 0.19
MCF2L-209ENST00000397036 ZNF219Q9P2Y4 722 aaPredicted RBP16.26■□□□□ 0.19
MCF2L-209ENST00000397036 GTF2IP78347 998 aa16.25■□□□□ 0.19
MCF2L-209ENST00000397036 MFSD14BQ5SR56 506 aa16.25■□□□□ 0.19
MCF2L-209ENST00000397036 VPS53Q5VIR6 699 aa16.25■□□□□ 0.19
MCF2L-209ENST00000397036 RASEFQ8IZ41 740 aa16.25■□□□□ 0.19
MCF2L-209ENST00000397036 RIOK1Q9BRS2 568 aaKnown RBP16.25■□□□□ 0.19
MCF2L-209ENST00000397036 LTBP3Q9NS15 1303 aa16.25■□□□□ 0.19
MCF2L-209ENST00000397036 MAGEB6P1A0A0J9YX57 407 aa16.24■□□□□ 0.19
MCF2L-209ENST00000397036 MBD4O95243 580 aa16.24■□□□□ 0.19
MCF2L-209ENST00000397036 FGAP02671 866 aa16.24■□□□□ 0.19
MCF2L-209ENST00000397036 DOK7Q18PE1 504 aa16.24■□□□□ 0.19
MCF2L-209ENST00000397036 GIMAP6Q6P9H5 292 aa16.24■□□□□ 0.19
MCF2L-209ENST00000397036 DZIP1Q86YF9 867 aaKnown RBP16.24■□□□□ 0.19
MCF2L-209ENST00000397036 CACNA1SQ13698 1873 aa16.24■□□□□ 0.19
MCF2L-209ENST00000397036 PPIP5K2O43314 1243 aa16.24■□□□□ 0.19
MCF2L-209ENST00000397036 ECE2O60344 883 aa16.24■□□□□ 0.19
MCF2L-209ENST00000397036 PSMA5P28066 241 aa16.24■□□□□ 0.19
MCF2L-209ENST00000397036 ADGRA1Q86SQ6 560 aa16.24■□□□□ 0.19
MCF2L-209ENST00000397036 PPP1R1BQ9UD71 204 aaPredicted RBP16.24■□□□□ 0.19
MCF2L-209ENST00000397036 GSG1L2A8MUP6 293 aa16.23■□□□□ 0.19
MCF2L-209ENST00000397036 CYP21A2P08686 494 aa16.23■□□□□ 0.19
MCF2L-209ENST00000397036 HDLBPQ00341 1268 aaKnown RBP16.23■□□□□ 0.19
MCF2L-209ENST00000397036 AOC3Q16853 763 aa16.23■□□□□ 0.19
MCF2L-209ENST00000397036 NACAP1Q9BZK3 213 aa16.23■□□□□ 0.19
MCF2L-209ENST00000397036 ZSWIM6Q9HCJ5 1215 aa16.23■□□□□ 0.19
MCF2L-209ENST00000397036 MYO5AQ9Y4I1 1855 aaKnown RBP16.23■□□□□ 0.19
MCF2L-209ENST00000397036 GPR75-ASB3A0A0A6YYF3 556 aa16.22■□□□□ 0.19
MCF2L-209ENST00000397036 USP17L3A6NCW0 530 aa16.22■□□□□ 0.19
MCF2L-209ENST00000397036 USP17L4A6NCW7 530 aa16.22■□□□□ 0.19
MCF2L-209ENST00000397036 ST18O60284 1047 aa16.22■□□□□ 0.19
MCF2L-209ENST00000397036 BAG3O95817 575 aa16.22■□□□□ 0.19
MCF2L-209ENST00000397036 MCM2P49736 904 aa16.22■□□□□ 0.19
MCF2L-209ENST00000397036 DACT2Q5SW24 774 aa16.22■□□□□ 0.19
MCF2L-209ENST00000397036 USP17L1Q7RTZ2 530 aa16.22■□□□□ 0.19
MCF2L-209ENST00000397036 IFNL3Q8IZI9 196 aa16.22■□□□□ 0.19
MCF2L-209ENST00000397036 LCORLQ8N3X6 602 aa16.22■□□□□ 0.19
MCF2L-209ENST00000397036 ARMT1Q9H993 441 aa16.22■□□□□ 0.19
MCF2L-209ENST00000397036 DBNDD1Q9H9R9 158 aa16.22■□□□□ 0.19
MCF2L-209ENST00000397036 JAG2Q9Y219 1238 aa16.22■□□□□ 0.19
MCF2L-209ENST00000397036 GAKO14976 1311 aa16.22■□□□□ 0.19
MCF2L-209ENST00000397036 MYH13Q9UKX3 1938 aa16.21■□□□□ 0.19
MCF2L-209ENST00000397036 GRIK5Q16478 980 aa16.21■□□□□ 0.19
MCF2L-209ENST00000397036 IMMTQ16891 758 aaKnown RBP16.21■□□□□ 0.19
MCF2L-209ENST00000397036 TBC1D2Q9BYX2 928 aa16.21■□□□□ 0.19
MCF2L-209ENST00000397036 ALDH8A1Q9H2A2 487 aaPredicted RBP16.21■□□□□ 0.19
MCF2L-209ENST00000397036 TAOK3Q9H2K8 898 aa16.21■□□□□ 0.19
MCF2L-209ENST00000397036 BRCA1P38398 1863 aaKnown RBP16.21■□□□□ 0.19
MCF2L-209ENST00000397036 MROH7-TTC4A0A0A0MT08 1334 aa16.2■□□□□ 0.18
MCF2L-209ENST00000397036 HMGB1P09429 215 aaKnown RBP16.2■□□□□ 0.18
MCF2L-209ENST00000397036 PLCG2P16885 1265 aa16.2■□□□□ 0.18
MCF2L-209ENST00000397036 IARSP41252 1262 aaKnown RBP16.2■□□□□ 0.18
MCF2L-209ENST00000397036 NEK4P51957 841 aa16.2■□□□□ 0.18
MCF2L-209ENST00000397036 HHIPL2Q6UWX4 724 aa16.2■□□□□ 0.18
MCF2L-209ENST00000397036 LARGE2Q8N3Y3 721 aa16.2■□□□□ 0.18
MCF2L-209ENST00000397036 CERS5Q8N5B7 392 aa16.2■□□□□ 0.18
MCF2L-209ENST00000397036 MIGA1Q8NAN2 632 aa16.2■□□□□ 0.18
MCF2L-209ENST00000397036 ATP8A2Q9NTI2 1148 aa16.2■□□□□ 0.18
MCF2L-209ENST00000397036 BCS1LQ9Y276 419 aa16.2■□□□□ 0.18
MCF2L-209ENST00000397036 SLC4A4Q9Y6R1 1079 aa16.2■□□□□ 0.18
MCF2L-209ENST00000397036 CHD4Q14839 1912 aa16.2■□□□□ 0.18
MCF2L-209ENST00000397036 NLGN2Q8NFZ4 835 aa16.19■□□□□ 0.18
MCF2L-209ENST00000397036 CRNKL1Q9BZJ0 848 aaKnown RBP16.19■□□□□ 0.18
MCF2L-209ENST00000397036 ZNF277Q9NRM2 450 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-209ENST00000397036 ZNRF3Q9ULT6 936 aa16.19■□□□□ 0.18
MCF2L-209ENST00000397036 MYO3BQ8WXR4 1341 aa16.19■□□□□ 0.18
MCF2L-209ENST00000397036 YDJCA8MPS7 323 aa16.19■□□□□ 0.18
MCF2L-209ENST00000397036 NFKBIEO00221 500 aa16.19■□□□□ 0.18
MCF2L-209ENST00000397036 ZNF213O14771 459 aa16.19■□□□□ 0.18
MCF2L-209ENST00000397036 APPP05067 770 aa16.19■□□□□ 0.18
MCF2L-209ENST00000397036 VIL1P09327 827 aaKnown RBP16.19■□□□□ 0.18
MCF2L-209ENST00000397036 MMP14P50281 582 aa16.19■□□□□ 0.18
MCF2L-209ENST00000397036 ADCK5Q3MIX3 580 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms