RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 SLC4A8Q2Y0W8 1093 aa25■■□□□ 1.59
UPK3B-203ENST00000394849 LMBR1LQ6UX01 489 aa25■■□□□ 1.59
UPK3B-203ENST00000394849 DZIP1LQ8IYY4 767 aaKnown RBP25■■□□□ 1.59
UPK3B-203ENST00000394849 BRI3BPQ8WY22 251 aa25■■□□□ 1.59
UPK3B-203ENST00000394849 TEPSINQ96N21 525 aa25■■□□□ 1.59
UPK3B-203ENST00000394849 TDRD3Q9H7E2 651 aaKnown RBP25■■□□□ 1.59
UPK3B-203ENST00000394849 JAG2Q9Y219 1238 aa25■■□□□ 1.59
UPK3B-203ENST00000394849 AOX1Q06278 1338 aa25■■□□□ 1.59
UPK3B-203ENST00000394849 HIBADHP31937 336 aaKnown RBP24.99■■□□□ 1.59
UPK3B-203ENST00000394849 VGLL4Q14135 290 aa24.99■■□□□ 1.59
UPK3B-203ENST00000394849 KIF22Q14807 665 aa24.99■■□□□ 1.59
UPK3B-203ENST00000394849 PTCH2Q9Y6C5 1203 aa24.99■■□□□ 1.59
UPK3B-203ENST00000394849 PLIN1O60240 522 aa24.98■■□□□ 1.59
UPK3B-203ENST00000394849 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.98■■□□□ 1.59
UPK3B-203ENST00000394849 HOOK2Q96ED9 719 aa24.98■■□□□ 1.59
UPK3B-203ENST00000394849 ARAP2Q8WZ64 1704 aa24.98■■□□□ 1.59
UPK3B-203ENST00000394849 PRMT2P55345 433 aa24.97■■□□□ 1.59
UPK3B-203ENST00000394849 HDLBPQ00341 1268 aaKnown RBP24.97■■□□□ 1.59
UPK3B-203ENST00000394849 CAP1Q01518 475 aa24.97■■□□□ 1.59
UPK3B-203ENST00000394849 BEND3Q5T5X7 828 aa24.97■■□□□ 1.59
UPK3B-203ENST00000394849 CEP290O15078 2479 aa24.97■■□□□ 1.59
UPK3B-203ENST00000394849 GRM8O00222 908 aa24.96■■□□□ 1.59
UPK3B-203ENST00000394849 CETPP11597 493 aa24.96■■□□□ 1.59
UPK3B-203ENST00000394849 SPDYE5A6NIY4 337 aa24.95■■□□□ 1.58
UPK3B-203ENST00000394849 TCP10L2B9ZVM9 353 aa24.95■■□□□ 1.58
UPK3B-203ENST00000394849 TLR2O60603 784 aa24.95■■□□□ 1.58
UPK3B-203ENST00000394849 CRKP46108 304 aa24.95■■□□□ 1.58
UPK3B-203ENST00000394849 FAM43AQ8N2R8 423 aa24.95■■□□□ 1.58
UPK3B-203ENST00000394849 OTUD5Q96G74 571 aa24.95■■□□□ 1.58
UPK3B-203ENST00000394849 TMEM39BQ9GZU3 492 aa24.95■■□□□ 1.58
UPK3B-203ENST00000394849 COLQQ9Y215 455 aaPredicted RBP24.95■■□□□ 1.58
UPK3B-203ENST00000394849 VAMP4O75379 141 aa24.94■■□□□ 1.58
UPK3B-203ENST00000394849 ERO1BQ86YB8 467 aa24.94■■□□□ 1.58
UPK3B-203ENST00000394849 TBC1D22AQ8WUA7 517 aa24.94■■□□□ 1.58
UPK3B-203ENST00000394849 ZNF594Q96JF6 807 aaPredicted RBP24.94■■□□□ 1.58
UPK3B-203ENST00000394849 FAM84BQ96KN1 310 aaPredicted RBP24.94■■□□□ 1.58
UPK3B-203ENST00000394849 CNKSR2Q8WXI2 1034 aa24.93■■□□□ 1.58
UPK3B-203ENST00000394849 C9orf78Q9NZ63 289 aaPredicted RBP24.93■■□□□ 1.58
UPK3B-203ENST00000394849 FANCIQ9NVI1 1328 aa24.92■■□□□ 1.58
UPK3B-203ENST00000394849 GYG1P46976 350 aa24.92■■□□□ 1.58
UPK3B-203ENST00000394849 LACTBP83111 547 aaPredicted RBP24.92■■□□□ 1.58
UPK3B-203ENST00000394849 SNAPC2Q13487 334 aa24.92■■□□□ 1.58
UPK3B-203ENST00000394849 EPHA10Q5JZY3 1008 aa24.92■■□□□ 1.58
UPK3B-203ENST00000394849 VPS37DQ86XT2 251 aa24.92■■□□□ 1.58
UPK3B-203ENST00000394849 MRIQ9BWK5 157 aa24.92■■□□□ 1.58
UPK3B-203ENST00000394849 TMOD2Q9NZR1 351 aa24.92■■□□□ 1.58
UPK3B-203ENST00000394849 MROH5Q6ZUA9 1318 aa24.91■■□□□ 1.58
UPK3B-203ENST00000394849 FKBP1CQ5VVH2 108 aa24.91■■□□□ 1.58
UPK3B-203ENST00000394849 FAM83AQ86UY5 434 aa24.91■■□□□ 1.58
UPK3B-203ENST00000394849 F6X3S4 739 aa24.9■■□□□ 1.58
UPK3B-203ENST00000394849 ALDH1L1O75891 902 aa24.9■■□□□ 1.58
UPK3B-203ENST00000394849 WDR63Q8IWG1 891 aa24.9■■□□□ 1.58
UPK3B-203ENST00000394849 CDAN1Q8IWY9 1227 aa24.9■■□□□ 1.58
UPK3B-203ENST00000394849 TEKT1Q969V4 418 aa24.9■■□□□ 1.58
UPK3B-203ENST00000394849 PPIL2Q13356 520 aa24.89■■□□□ 1.58
UPK3B-203ENST00000394849 TRIOBPQ9H2D6 2365 aa24.89■■□□□ 1.57
UPK3B-203ENST00000394849 H0YGN5 161 aa24.88■■□□□ 1.57
UPK3B-203ENST00000394849 CAVIN4Q5BKX8 364 aa24.88■■□□□ 1.57
UPK3B-203ENST00000394849 DCAF15Q66K64 600 aa24.88■■□□□ 1.57
UPK3B-203ENST00000394849 FBXO33Q7Z6M2 555 aa24.88■■□□□ 1.57
UPK3B-203ENST00000394849 NKX2-3Q8TAU0 364 aa24.88■■□□□ 1.57
UPK3B-203ENST00000394849 WRNIP1Q96S55 665 aa24.88■■□□□ 1.57
UPK3B-203ENST00000394849 SUGT1Q9Y2Z0 365 aa24.88■■□□□ 1.57
UPK3B-203ENST00000394849 SNCAIPQ9Y6H5 919 aa24.88■■□□□ 1.57
UPK3B-203ENST00000394849 MAST3O60307 1309 aa24.87■■□□□ 1.57
UPK3B-203ENST00000394849 BTBD19C9JJ37 291 aa24.87■■□□□ 1.57
UPK3B-203ENST00000394849 FRAT2O75474 233 aaPredicted RBP24.87■■□□□ 1.57
UPK3B-203ENST00000394849 HOXD10P28358 340 aa24.87■■□□□ 1.57
UPK3B-203ENST00000394849 SH3TC2Q8TF17 1288 aa24.87■■□□□ 1.57
UPK3B-203ENST00000394849 ZDHHC15Q96MV8 337 aa24.87■■□□□ 1.57
UPK3B-203ENST00000394849 RIPOR2Q9Y4F9 1068 aa24.87■■□□□ 1.57
UPK3B-203ENST00000394849 IRF6O14896 467 aa24.86■■□□□ 1.57
UPK3B-203ENST00000394849 PPATQ06203 517 aa24.86■■□□□ 1.57
UPK3B-203ENST00000394849 RPAP1Q9BWH6 1393 aaPredicted RBP24.85■■□□□ 1.57
UPK3B-203ENST00000394849 EXOSC9Q06265 439 aaKnown RBP24.85■■□□□ 1.57
UPK3B-203ENST00000394849 ARHGAP39Q9C0H5 1083 aa24.85■■□□□ 1.57
UPK3B-203ENST00000394849 SRCIN1Q9C0H9 1055 aa24.85■■□□□ 1.57
UPK3B-203ENST00000394849 MYCP01106 439 aaPredicted RBP24.84■■□□□ 1.57
UPK3B-203ENST00000394849 C17orf99Q6UX52 265 aa24.84■■□□□ 1.57
UPK3B-203ENST00000394849 CHAF1AQ13111 956 aaPredicted RBP24.83■■□□□ 1.57
UPK3B-203ENST00000394849 ZKSCAN4Q969J2 545 aaPredicted RBP24.83■■□□□ 1.57
UPK3B-203ENST00000394849 ZNF341Q9BYN7 854 aa24.83■■□□□ 1.57
UPK3B-203ENST00000394849 PUS3Q9BZE2 481 aaKnown RBP24.83■■□□□ 1.57
UPK3B-203ENST00000394849 SRRDQ9UH36 339 aa24.83■■□□□ 1.57
UPK3B-203ENST00000394849 HHIPL2Q6UWX4 724 aa24.82■■□□□ 1.56
UPK3B-203ENST00000394849 ANKRD23Q86SG2 305 aa24.82■■□□□ 1.56
UPK3B-203ENST00000394849 ANP32CO43423 234 aa24.81■■□□□ 1.56
UPK3B-203ENST00000394849 PSMC4P43686 418 aa24.81■■□□□ 1.56
UPK3B-203ENST00000394849 CACNB3P54284 484 aa24.81■■□□□ 1.56
UPK3B-203ENST00000394849 GRIK5Q16478 980 aa24.81■■□□□ 1.56
UPK3B-203ENST00000394849 APOBEC3HQ6NTF7 200 aaKnown RBP24.81■■□□□ 1.56
UPK3B-203ENST00000394849 DPF3Q92784 378 aa24.81■■□□□ 1.56
UPK3B-203ENST00000394849 HTATIP2Q9BUP3 242 aa24.81■■□□□ 1.56
UPK3B-203ENST00000394849 KIF16BQ96L93 1317 aa24.81■■□□□ 1.56
UPK3B-203ENST00000394849 METTL24Q5JXM2 366 aa24.8■■□□□ 1.56
UPK3B-203ENST00000394849 SLC4A10Q6U841 1118 aa24.8■■□□□ 1.56
UPK3B-203ENST00000394849 RAET1EQ8TD07 263 aa24.8■■□□□ 1.56
UPK3B-203ENST00000394849 SUCLG2Q96I99 432 aa24.8■■□□□ 1.56
UPK3B-203ENST00000394849 IQSEC3Q9UPP2 1182 aaPredicted RBP24.8■■□□□ 1.56
UPK3B-203ENST00000394849 UTYO14607 1347 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms