RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 CLIC6Q96NY7 704 aa12.21□□□□□ -0.45
ACTN1-203ENST00000394419 ZNF532Q9HCE3 1301 aa12.21□□□□□ -0.46
ACTN1-203ENST00000394419 FER1L4A9Z1Z3 1794 aa12.21□□□□□ -0.46
ACTN1-203ENST00000394419 PHKA1P46020 1223 aa12.21□□□□□ -0.46
ACTN1-203ENST00000394419 CASP7P55210 303 aa12.21□□□□□ -0.46
ACTN1-203ENST00000394419 MAGEB6Q8N7X4 407 aa12.21□□□□□ -0.46
ACTN1-203ENST00000394419 JMYQ8N9B5 988 aa12.21□□□□□ -0.46
ACTN1-203ENST00000394419 CNNM3Q8NE01 707 aa12.21□□□□□ -0.46
ACTN1-203ENST00000394419 XPO4Q9C0E2 1151 aaKnown RBP12.21□□□□□ -0.46
ACTN1-203ENST00000394419 ALDH8A1Q9H2A2 487 aaPredicted RBP12.21□□□□□ -0.46
ACTN1-203ENST00000394419 FDPSP14324 419 aaKnown RBP12.2□□□□□ -0.46
ACTN1-203ENST00000394419 ADALQ6DHV7 355 aa12.2□□□□□ -0.46
ACTN1-203ENST00000394419 VPS37DQ86XT2 251 aa12.2□□□□□ -0.46
ACTN1-203ENST00000394419 KIAA1468Q9P260 1216 aa12.2□□□□□ -0.46
ACTN1-203ENST00000394419 CDKL5O76039 1030 aa12.2□□□□□ -0.46
ACTN1-203ENST00000394419 SLC4A8Q2Y0W8 1093 aa12.2□□□□□ -0.46
ACTN1-203ENST00000394419 PLA2G4DQ86XP0 818 aa12.2□□□□□ -0.46
ACTN1-203ENST00000394419 ZNF710Q8N1W2 664 aa12.2□□□□□ -0.46
ACTN1-203ENST00000394419 LINC00301Q8NCQ3 95 aa12.2□□□□□ -0.46
ACTN1-203ENST00000394419 KIF18AQ8NI77 898 aa12.2□□□□□ -0.46
ACTN1-203ENST00000394419 ANGEL1Q9UNK9 670 aaKnown RBP12.2□□□□□ -0.46
ACTN1-203ENST00000394419 ERVV-2B6SEH9 535 aa12.2□□□□□ -0.46
ACTN1-203ENST00000394419 MCAMP43121 646 aa12.2□□□□□ -0.46
ACTN1-203ENST00000394419 ZNF771Q7L3S4 317 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-203ENST00000394419 LRP10Q7Z4F1 713 aa12.2□□□□□ -0.46
ACTN1-203ENST00000394419 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-203ENST00000394419 ARMT1Q9H993 441 aa12.2□□□□□ -0.46
ACTN1-203ENST00000394419 MBD4O95243 580 aa12.19□□□□□ -0.46
ACTN1-203ENST00000394419 PFKFB1P16118 471 aa12.19□□□□□ -0.46
ACTN1-203ENST00000394419 KRT40Q6A162 431 aa12.19□□□□□ -0.46
ACTN1-203ENST00000394419 KLHL10Q6JEL2 608 aa12.19□□□□□ -0.46
ACTN1-203ENST00000394419 ZBTB9Q96C00 473 aa12.19□□□□□ -0.46
ACTN1-203ENST00000394419 hCG_1642624A0A1W2PR95 340 aa12.19□□□□□ -0.46
ACTN1-203ENST00000394419 IQCB1Q15051 598 aa12.19□□□□□ -0.46
ACTN1-203ENST00000394419 BICDL1Q6ZP65 573 aa12.19□□□□□ -0.46
ACTN1-203ENST00000394419 TRIM22Q8IYM9 498 aa12.19□□□□□ -0.46
ACTN1-203ENST00000394419 ACSBG1Q96GR2 724 aa12.19□□□□□ -0.46
ACTN1-203ENST00000394419 KCNJ14Q9UNX9 436 aa12.19□□□□□ -0.46
ACTN1-203ENST00000394419 SMTNL1A8MU46 457 aa12.19□□□□□ -0.46
ACTN1-203ENST00000394419 UBASH3AP57075 661 aa12.19□□□□□ -0.46
ACTN1-203ENST00000394419 GOLGA8FQ08AF8 430 aa12.19□□□□□ -0.46
ACTN1-203ENST00000394419 GOLGA8DPQ0D2H9 430 aa12.19□□□□□ -0.46
ACTN1-203ENST00000394419 MAP3K12Q12852 859 aa12.19□□□□□ -0.46
ACTN1-203ENST00000394419 PNOCQ13519 176 aa12.19□□□□□ -0.46
ACTN1-203ENST00000394419 SNW1Q13573 536 aaKnown RBP12.19□□□□□ -0.46
ACTN1-203ENST00000394419 SART3Q15020 963 aaKnown RBP12.19□□□□□ -0.46
ACTN1-203ENST00000394419 BTG4Q9NY30 223 aa12.19□□□□□ -0.46
ACTN1-203ENST00000394419 RAI14Q9P0K7 980 aa12.19□□□□□ -0.46
ACTN1-203ENST00000394419 WWC3Q9ULE0 1092 aa12.19□□□□□ -0.46
ACTN1-203ENST00000394419 SSRP1Q08945 709 aaKnown RBP12.18□□□□□ -0.46
ACTN1-203ENST00000394419 SYT10Q6XYQ8 523 aa12.18□□□□□ -0.46
ACTN1-203ENST00000394419 GPR108Q9NPR9 543 aa12.18□□□□□ -0.46
ACTN1-203ENST00000394419 KIF28PB7ZC32 967 aa12.18□□□□□ -0.46
ACTN1-203ENST00000394419 UBE2Q2LH0YL09 131 aa12.18□□□□□ -0.46
ACTN1-203ENST00000394419 DZIP3Q86Y13 1208 aaKnown RBP12.18□□□□□ -0.46
ACTN1-203ENST00000394419 ZBTB38Q8NAP3 1195 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-203ENST00000394419 PIGBQ92521 554 aa12.18□□□□□ -0.46
ACTN1-203ENST00000394419 SENP2Q9HC62 589 aa12.18□□□□□ -0.46
ACTN1-203ENST00000394419 RTEL1Q9NZ71 1219 aa12.18□□□□□ -0.46
ACTN1-203ENST00000394419 PAXBP1Q9Y5B6 917 aa12.18□□□□□ -0.46
ACTN1-203ENST00000394419 WDR17Q8IZU2 1322 aa12.18□□□□□ -0.46
ACTN1-203ENST00000394419 PES1O00541 588 aaKnown RBP12.17□□□□□ -0.46
ACTN1-203ENST00000394419 CCDC102BQ68D86 513 aa12.17□□□□□ -0.46
ACTN1-203ENST00000394419 MFSD6Q6ZSS7 791 aa12.17□□□□□ -0.46
ACTN1-203ENST00000394419 UBAC1Q9BSL1 405 aa12.17□□□□□ -0.46
ACTN1-203ENST00000394419 PIH1D3Q9NQM4 214 aaKnown RBP12.17□□□□□ -0.46
ACTN1-203ENST00000394419 SPATA31A3Q5VYP0 1347 aa12.17□□□□□ -0.46
ACTN1-203ENST00000394419 LRRC37A3O60309 1634 aa12.17□□□□□ -0.46
ACTN1-203ENST00000394419 ATP1A3P13637 1013 aa12.17□□□□□ -0.46
ACTN1-203ENST00000394419 BRAPQ7Z569 592 aa12.17□□□□□ -0.46
ACTN1-203ENST00000394419 NACAP1Q9BZK3 213 aa12.17□□□□□ -0.46
ACTN1-203ENST00000394419 ZBTB1Q9Y2K1 713 aa12.17□□□□□ -0.46
ACTN1-203ENST00000394419 SLC4A4Q9Y6R1 1079 aa12.17□□□□□ -0.46
ACTN1-203ENST00000394419 CIAO1O76071 339 aa12.17□□□□□ -0.46
ACTN1-203ENST00000394419 PDE6AP16499 860 aa12.17□□□□□ -0.46
ACTN1-203ENST00000394419 TTF1Q15361 905 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-203ENST00000394419 CYB5R4Q7L1T6 521 aa12.17□□□□□ -0.46
ACTN1-203ENST00000394419 TBC1D10CQ8IV04 446 aa12.17□□□□□ -0.46
ACTN1-203ENST00000394419 FMR1NBQ8N0W7 255 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-203ENST00000394419 ZNF215Q9UL58 517 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-203ENST00000394419 NEMFO60524 1076 aa12.16□□□□□ -0.46
ACTN1-203ENST00000394419 PCCAP05165 728 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-203ENST00000394419 GSDMDP57764 484 aa12.16□□□□□ -0.46
ACTN1-203ENST00000394419 ATL3Q6DD88 541 aa12.16□□□□□ -0.46
ACTN1-203ENST00000394419 DHX40Q8IX18 779 aaKnown RBP12.16□□□□□ -0.46
ACTN1-203ENST00000394419 MNS1Q8NEH6 495 aa12.16□□□□□ -0.46
ACTN1-203ENST00000394419 RASSF8Q8NHQ8 419 aa12.16□□□□□ -0.46
ACTN1-203ENST00000394419 CPLX3Q8WVH0 158 aa12.16□□□□□ -0.46
ACTN1-203ENST00000394419 MRFAP1L1Q96HT8 127 aa12.16□□□□□ -0.46
ACTN1-203ENST00000394419 PRKAB2O43741 272 aa12.16□□□□□ -0.46
ACTN1-203ENST00000394419 RANBP6O60518 1105 aaKnown RBP12.16□□□□□ -0.46
ACTN1-203ENST00000394419 URI1O94763 535 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-203ENST00000394419 TOP1P11387 765 aaKnown RBP12.16□□□□□ -0.46
ACTN1-203ENST00000394419 KIF23Q02241 960 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-203ENST00000394419 ILDR1Q86SU0 546 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-203ENST00000394419 TTLL11Q8NHH1 800 aa12.16□□□□□ -0.46
ACTN1-203ENST00000394419 DNAI1Q9UI46 699 aa12.16□□□□□ -0.46
ACTN1-203ENST00000394419 SLC5A1P13866 664 aa12.16□□□□□ -0.46
ACTN1-203ENST00000394419 CTSWP56202 376 aa12.16□□□□□ -0.46
ACTN1-203ENST00000394419 ANTXR2P58335 489 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms