RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 DUX4L4P0CJ87 422 aa14.97□□□□□ -0.01
USP49-203ENST00000394253 DUX4L5P0CJ88 424 aa14.97□□□□□ -0.01
USP49-203ENST00000394253 DUX4L6P0CJ89 424 aa14.97□□□□□ -0.01
USP49-203ENST00000394253 DUX4L7P0CJ90 424 aa14.97□□□□□ -0.01
USP49-203ENST00000394253 BRD2P25440 801 aaKnown RBP14.97□□□□□ -0.01
USP49-203ENST00000394253 PRKAR2BP31323 418 aa14.97□□□□□ -0.01
USP49-203ENST00000394253 DUX4Q9UBX2 424 aa14.97□□□□□ -0.01
USP49-203ENST00000394253 MYL6BP14649 208 aa14.97□□□□□ -0.01
USP49-203ENST00000394253 GUCY1B3Q02153 619 aa14.97□□□□□ -0.01
USP49-203ENST00000394253 EXOSC9Q06265 439 aaKnown RBP14.97□□□□□ -0.01
USP49-203ENST00000394253 DDX21Q9NR30 783 aaKnown RBP eCLIP14.97□□□□□ -0.01
USP49-203ENST00000394253 RAD50Q92878 1312 aa14.96□□□□□ -0.01
USP49-203ENST00000394253 HSPA8P11142 646 aaKnown RBP14.96□□□□□ -0.01
USP49-203ENST00000394253 SERPINB6P35237 376 aa14.96□□□□□ -0.01
USP49-203ENST00000394253 PAK2Q13177 524 aa14.96□□□□□ -0.01
USP49-203ENST00000394253 RBSNQ9H1K0 784 aa14.96□□□□□ -0.01
USP49-203ENST00000394253 SSFA2P28290 1259 aa14.96□□□□□ -0.01
USP49-203ENST00000394253 TMEM67Q5HYA8 995 aa14.96□□□□□ -0.01
USP49-203ENST00000394253 HS2ST1Q7LGA3 356 aa14.96□□□□□ -0.01
USP49-203ENST00000394253 NUDCD3Q8IVD9 361 aa14.96□□□□□ -0.01
USP49-203ENST00000394253 ANKIB1Q9P2G1 1089 aa14.96□□□□□ -0.01
USP49-203ENST00000394253 TSKSQ9UJT2 592 aa14.96□□□□□ -0.01
USP49-203ENST00000394253 PPME1Q9Y570 386 aa14.96□□□□□ -0.01
USP49-203ENST00000394253 SKOR1P84550 965 aa14.96□□□□□ -0.01
USP49-203ENST00000394253 ISM2Q6H9L7 571 aa14.96□□□□□ -0.01
USP49-203ENST00000394253 ZC3H15Q8WU90 426 aaKnown RBP14.96□□□□□ -0.01
USP49-203ENST00000394253 TEKT2Q9UIF3 430 aa14.96□□□□□ -0.01
USP49-203ENST00000394253 EVI5LQ96CN4 794 aa14.96□□□□□ -0.01
USP49-203ENST00000394253 RAB17Q9H0T7 212 aa14.96□□□□□ -0.01
USP49-203ENST00000394253 IFIT1P09914 478 aaKnown RBP14.96□□□□□ -0.02
USP49-203ENST00000394253 ZKSCAN8Q15776 578 aaPredicted RBP14.96□□□□□ -0.02
USP49-203ENST00000394253 ABTB2Q8N961 1025 aa14.96□□□□□ -0.02
USP49-203ENST00000394253 STX10O60499 249 aa14.96□□□□□ -0.02
USP49-203ENST00000394253 PYGLP06737 847 aa14.95□□□□□ -0.02
USP49-203ENST00000394253 TATP17735 454 aaPredicted RBP14.95□□□□□ -0.02
USP49-203ENST00000394253 NOP14P78316 857 aaKnown RBP14.95□□□□□ -0.02
USP49-203ENST00000394253 ZBTB12Q9Y330 459 aaPredicted RBP14.95□□□□□ -0.02
USP49-203ENST00000394253 MCM7P33993 719 aa14.95□□□□□ -0.02
USP49-203ENST00000394253 PHBP35232 272 aa14.95□□□□□ -0.02
USP49-203ENST00000394253 PPP2R5EQ16537 467 aa14.95□□□□□ -0.02
USP49-203ENST00000394253 ZSCAN26Q16670 478 aa14.95□□□□□ -0.02
USP49-203ENST00000394253 UTP14CQ5TAP6 766 aaKnown RBP14.95□□□□□ -0.02
USP49-203ENST00000394253 CA8P35219 290 aa14.95□□□□□ -0.02
USP49-203ENST00000394253 HEATR3Q7Z4Q2 680 aa14.95□□□□□ -0.02
USP49-203ENST00000394253 LEO1Q8WVC0 666 aaPredicted RBP14.95□□□□□ -0.02
USP49-203ENST00000394253 RBM42Q9BTD8 480 aaKnown RBP14.95□□□□□ -0.02
USP49-203ENST00000394253 CAPN7Q9Y6W3 813 aa14.95□□□□□ -0.02
USP49-203ENST00000394253 MYH11P35749 1972 aa14.95□□□□□ -0.02
USP49-203ENST00000394253 HNRNPCL2B2RXH8 293 aa14.95□□□□□ -0.02
USP49-203ENST00000394253 HNRNPCL1O60812 293 aaKnown RBP14.95□□□□□ -0.02
USP49-203ENST00000394253 GIMAP6Q6P9H5 292 aa14.95□□□□□ -0.02
USP49-203ENST00000394253 MFSD6Q6ZSS7 791 aa14.95□□□□□ -0.02
USP49-203ENST00000394253 TRIM55Q9BYV6 548 aa14.95□□□□□ -0.02
USP49-203ENST00000394253 EEF1DP29692 281 aaKnown RBP14.95□□□□□ -0.02
USP49-203ENST00000394253 SLC12A2P55011 1212 aa14.95□□□□□ -0.02
USP49-203ENST00000394253 SYCE1Q8N0S2 351 aa14.95□□□□□ -0.02
USP49-203ENST00000394253 ANGPTL3Q9Y5C1 460 aa14.95□□□□□ -0.02
USP49-203ENST00000394253 TTC4O95801 387 aa14.95□□□□□ -0.02
USP49-203ENST00000394253 RPL13P26373 211 aaKnown RBP14.95□□□□□ -0.02
USP49-203ENST00000394253 GABPAQ06546 454 aa14.95□□□□□ -0.02
USP49-203ENST00000394253 KAT14Q9H8E8 782 aa14.95□□□□□ -0.02
USP49-203ENST00000394253 SESN3P58005 492 aa14.95□□□□□ -0.02
USP49-203ENST00000394253 SPG7Q9UQ90 795 aa14.95□□□□□ -0.02
USP49-203ENST00000394253 ZRANB2O95218 330 aaKnown RBP eCLIP14.94□□□□□ -0.02
USP49-203ENST00000394253 AOPEPQ8N6M6 819 aa14.94□□□□□ -0.02
USP49-203ENST00000394253 TTF2Q9UNY4 1162 aaKnown RBP14.94□□□□□ -0.02
USP49-203ENST00000394253 ABTB1Q969K4 478 aaPredicted RBP14.94□□□□□ -0.02
USP49-203ENST00000394253 PPP1R1BQ9UD71 204 aaPredicted RBP14.94□□□□□ -0.02
USP49-203ENST00000394253 SCOCQ9UIL1 159 aa14.94□□□□□ -0.02
USP49-203ENST00000394253 RAD54L2Q9Y4B4 1467 aa14.94□□□□□ -0.02
USP49-203ENST00000394253 PPP1R2P41236 205 aa14.94□□□□□ -0.02
USP49-203ENST00000394253 TMTC2Q8N394 836 aa14.94□□□□□ -0.02
USP49-203ENST00000394253 MRPS27Q92552 414 aaKnown RBP14.94□□□□□ -0.02
USP49-203ENST00000394253 AKR1B15C9JRZ8 316 aaPredicted RBP14.94□□□□□ -0.02
USP49-203ENST00000394253 ZSCAN22P10073 491 aaPredicted RBP14.94□□□□□ -0.02
USP49-203ENST00000394253 CCT2P78371 535 aaKnown RBP14.94□□□□□ -0.02
USP49-203ENST00000394253 CCDC186Q7Z3E2 898 aa14.94□□□□□ -0.02
USP49-203ENST00000394253 ATP6V0A1Q93050 837 aa14.94□□□□□ -0.02
USP49-203ENST00000394253 ZNF830Q96NB3 372 aaPredicted RBP14.94□□□□□ -0.02
USP49-203ENST00000394253 YY1AP1Q9H869 796 aa14.94□□□□□ -0.02
USP49-203ENST00000394253 PDXDC1Q6P996 788 aa14.94□□□□□ -0.02
USP49-203ENST00000394253 TMCO5AQ8N6Q1 288 aa14.94□□□□□ -0.02
USP49-203ENST00000394253 SLC5A1P13866 664 aa14.94□□□□□ -0.02
USP49-203ENST00000394253 NOX5Q96PH1 765 aa14.94□□□□□ -0.02
USP49-203ENST00000394253 TACO1Q9BSH4 297 aaKnown RBP14.94□□□□□ -0.02
USP49-203ENST00000394253 SPOPO43791 374 aa14.94□□□□□ -0.02
USP49-203ENST00000394253 ASIC1P78348 528 aa14.94□□□□□ -0.02
USP49-203ENST00000394253 CTAGE3PQ8IX95 158 aa14.94□□□□□ -0.02
USP49-203ENST00000394253 FBXO41Q8TF61 875 aa14.94□□□□□ -0.02
USP49-203ENST00000394253 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.94□□□□□ -0.02
USP49-203ENST00000394253 BTBD11A6QL63 1104 aa14.93□□□□□ -0.02
USP49-203ENST00000394253 B4DLN1 442 aa14.93□□□□□ -0.02
USP49-203ENST00000394253 MRPL12P52815 198 aaKnown RBP14.93□□□□□ -0.02
USP49-203ENST00000394253 TAF12Q16514 161 aa14.93□□□□□ -0.02
USP49-203ENST00000394253 NUTM2AQ8IVF1 878 aaPredicted RBP14.93□□□□□ -0.02
USP49-203ENST00000394253 HOMER3Q9NSC5 361 aa14.93□□□□□ -0.02
USP49-203ENST00000394253 TTC19Q6DKK2 380 aaPredicted RBP14.93□□□□□ -0.02
USP49-203ENST00000394253 KRT15P19012 456 aa14.93□□□□□ -0.02
USP49-203ENST00000394253 CYP26C1Q6V0L0 522 aa14.93□□□□□ -0.02
USP49-203ENST00000394253 LRGUKQ96M69 825 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms