RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 CRKP46108 304 aa9.47□□□□□ -0.89
HMGB3P1-201ENST00000393368 VEGFBP49765 207 aa9.47□□□□□ -0.89
HMGB3P1-201ENST00000393368 TNNI3KQ59H18 835 aa9.47□□□□□ -0.89
HMGB3P1-201ENST00000393368 CYP4F22Q6NT55 531 aa9.47□□□□□ -0.89
HMGB3P1-201ENST00000393368 MOB2Q70IA6 237 aa9.47□□□□□ -0.89
HMGB3P1-201ENST00000393368 DBNDD2Q9BQY9 259 aa9.47□□□□□ -0.89
HMGB3P1-201ENST00000393368 FZD1Q9UP38 647 aa9.47□□□□□ -0.89
HMGB3P1-201ENST00000393368 AKAP2Q9Y2D5 859 aa9.47□□□□□ -0.89
HMGB3P1-201ENST00000393368 TLL2Q9Y6L7 1015 aa9.47□□□□□ -0.89
HMGB3P1-201ENST00000393368 FPGT-TNNI3KV9GXZ4 949 aa9.47□□□□□ -0.89
HMGB3P1-201ENST00000393368 RASSF10A6NK89 507 aa9.46□□□□□ -0.9
HMGB3P1-201ENST00000393368 PRDX5P30044 214 aa9.46□□□□□ -0.9
HMGB3P1-201ENST00000393368 CACNB3P54284 484 aa9.46□□□□□ -0.9
HMGB3P1-201ENST00000393368 PRKG1Q13976 671 aa9.46□□□□□ -0.9
HMGB3P1-201ENST00000393368 DIXDC1Q155Q3 683 aa9.46□□□□□ -0.9
HMGB3P1-201ENST00000393368 DEFB115Q30KQ5 88 aa9.46□□□□□ -0.9
HMGB3P1-201ENST00000393368 GORABQ5T7V8 394 aa9.46□□□□□ -0.9
HMGB3P1-201ENST00000393368 SAPCD2Q86UD0 394 aa9.46□□□□□ -0.9
HMGB3P1-201ENST00000393368 CDAN1Q8IWY9 1227 aa9.46□□□□□ -0.9
HMGB3P1-201ENST00000393368 MTMR14Q8NCE2 650 aa9.46□□□□□ -0.9
HMGB3P1-201ENST00000393368 TBC1D22AQ8WUA7 517 aa9.46□□□□□ -0.9
HMGB3P1-201ENST00000393368 CCDC8Q9H0W5 538 aaPredicted RBP9.46□□□□□ -0.9
HMGB3P1-201ENST00000393368 TDRD3Q9H7E2 651 aaKnown RBP9.46□□□□□ -0.9
HMGB3P1-201ENST00000393368 GNL3LQ9NVN8 582 aaKnown RBP9.46□□□□□ -0.9
HMGB3P1-201ENST00000393368 NOP58Q9Y2X3 529 aaKnown RBP9.46□□□□□ -0.9
HMGB3P1-201ENST00000393368 PITPNM2Q9BZ72 1349 aa9.46□□□□□ -0.9
HMGB3P1-201ENST00000393368 AOC2O75106 756 aa9.45□□□□□ -0.9
HMGB3P1-201ENST00000393368 HUNKP57058 714 aa9.45□□□□□ -0.9
HMGB3P1-201ENST00000393368 TBC1D9Q6ZT07 1266 aa9.45□□□□□ -0.9
HMGB3P1-201ENST00000393368 JMYQ8N9B5 988 aa9.45□□□□□ -0.9
HMGB3P1-201ENST00000393368 WDR66Q8TBY9 1149 aa9.45□□□□□ -0.9
HMGB3P1-201ENST00000393368 EAF2Q96CJ1 260 aaPredicted RBP9.45□□□□□ -0.9
HMGB3P1-201ENST00000393368 CRBNQ96SW2 442 aa9.45□□□□□ -0.9
HMGB3P1-201ENST00000393368 GBA2Q9HCG7 927 aaPredicted RBP9.45□□□□□ -0.9
HMGB3P1-201ENST00000393368 IL1RAPL2Q9NP60 686 aa9.45□□□□□ -0.9
HMGB3P1-201ENST00000393368 SNRKQ9NRH2 765 aa9.45□□□□□ -0.9
HMGB3P1-201ENST00000393368 HMG20BQ9P0W2 317 aa9.45□□□□□ -0.9
HMGB3P1-201ENST00000393368 SERPINA10Q9UK55 444 aa9.45□□□□□ -0.9
HMGB3P1-201ENST00000393368 DENND2AQ9ULE3 1009 aa9.45□□□□□ -0.9
HMGB3P1-201ENST00000393368 TCP10L2B9ZVM9 353 aa9.44□□□□□ -0.9
HMGB3P1-201ENST00000393368 MYO1BO43795 1136 aa9.44□□□□□ -0.9
HMGB3P1-201ENST00000393368 MCAMP43121 646 aa9.44□□□□□ -0.9
HMGB3P1-201ENST00000393368 SPDYE2Q495Y8 402 aa9.44□□□□□ -0.9
HMGB3P1-201ENST00000393368 TTC39AQ5SRH9 613 aa9.44□□□□□ -0.9
HMGB3P1-201ENST00000393368 APOBEC3FQ8IUX4 373 aaKnown RBP9.44□□□□□ -0.9
HMGB3P1-201ENST00000393368 RPAP2Q8IXW5 612 aaPredicted RBP9.44□□□□□ -0.9
HMGB3P1-201ENST00000393368 SPATA5Q8NB90 893 aa9.44□□□□□ -0.9
HMGB3P1-201ENST00000393368 TEKT1Q969V4 418 aa9.44□□□□□ -0.9
HMGB3P1-201ENST00000393368 CAPNS2Q96L46 248 aa9.44□□□□□ -0.9
HMGB3P1-201ENST00000393368 DEFB129Q9H1M3 183 aa9.44□□□□□ -0.9
HMGB3P1-201ENST00000393368 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.44□□□□□ -0.9
HMGB3P1-201ENST00000393368 ZNF70Q9UC06 446 aaPredicted RBP9.44□□□□□ -0.9
HMGB3P1-201ENST00000393368 ABCF2Q9UG63 623 aa9.44□□□□□ -0.9
HMGB3P1-201ENST00000393368 DBNLQ9UJU6 430 aaKnown RBP9.44□□□□□ -0.9
HMGB3P1-201ENST00000393368 NDUFB9Q9Y6M9 179 aa9.44□□□□□ -0.9
HMGB3P1-201ENST00000393368 WDR33Q9C0J8 1336 aaKnown RBP9.44□□□□□ -0.9
HMGB3P1-201ENST00000393368 SSC5DA1L4H1 1573 aa9.44□□□□□ -0.9
HMGB3P1-201ENST00000393368 TRPM7Q96QT4 1865 aa9.43□□□□□ -0.9
HMGB3P1-201ENST00000393368 SALL1Q9NSC2 1324 aa9.43□□□□□ -0.9
HMGB3P1-201ENST00000393368 UBE2Q2LH0YL09 131 aa9.43□□□□□ -0.9
HMGB3P1-201ENST00000393368 SEMA3EO15041 775 aa9.43□□□□□ -0.9
HMGB3P1-201ENST00000393368 LDHBP07195 334 aaKnown RBP9.43□□□□□ -0.9
HMGB3P1-201ENST00000393368 ARID4AP29374 1257 aaPredicted RBP9.43□□□□□ -0.9
HMGB3P1-201ENST00000393368 MMP14P50281 582 aa9.43□□□□□ -0.9
HMGB3P1-201ENST00000393368 TTLL12Q14166 644 aaPredicted RBP9.43□□□□□ -0.9
HMGB3P1-201ENST00000393368 RASA3Q14644 834 aa9.43□□□□□ -0.9
HMGB3P1-201ENST00000393368 NBPF12Q5TAG4 269 aaPredicted RBP9.43□□□□□ -0.9
HMGB3P1-201ENST00000393368 APOBEC3HQ6NTF7 200 aaKnown RBP9.43□□□□□ -0.9
HMGB3P1-201ENST00000393368 AACSQ86V21 672 aa9.43□□□□□ -0.9
HMGB3P1-201ENST00000393368 C2orf69Q8N8R5 385 aa9.43□□□□□ -0.9
HMGB3P1-201ENST00000393368 RHPN1Q8TCX5 695 aa9.43□□□□□ -0.9
HMGB3P1-201ENST00000393368 ZDHHC15Q96MV8 337 aa9.43□□□□□ -0.9
HMGB3P1-201ENST00000393368 ZIC5Q96T25 663 aa9.43□□□□□ -0.9
HMGB3P1-201ENST00000393368 GPR108Q9NPR9 543 aa9.43□□□□□ -0.9
HMGB3P1-201ENST00000393368 DAGLAQ9Y4D2 1042 aa9.43□□□□□ -0.9
HMGB3P1-201ENST00000393368 MAST3O60307 1309 aa9.42□□□□□ -0.9
HMGB3P1-201ENST00000393368 SMARCA5O60264 1052 aaPredicted RBP9.42□□□□□ -0.9
HMGB3P1-201ENST00000393368 HMMRO75330 724 aa9.42□□□□□ -0.9
HMGB3P1-201ENST00000393368 HSPA1AP0DMV8 641 aaKnown RBP9.42□□□□□ -0.9
HMGB3P1-201ENST00000393368 HSPA1BP0DMV9 641 aaKnown RBP9.42□□□□□ -0.9
HMGB3P1-201ENST00000393368 CCDC158Q5M9N0 1113 aa9.42□□□□□ -0.9
HMGB3P1-201ENST00000393368 DZIP1Q86YF9 867 aaKnown RBP9.42□□□□□ -0.9
HMGB3P1-201ENST00000393368 ERC1Q8IUD2 1116 aa9.42□□□□□ -0.9
HMGB3P1-201ENST00000393368 ZNF384Q8TF68 577 aa9.42□□□□□ -0.9
HMGB3P1-201ENST00000393368 TMEM39BQ9GZU3 492 aa9.42□□□□□ -0.9
HMGB3P1-201ENST00000393368 CHMP4BQ9H444 224 aaKnown RBP9.42□□□□□ -0.9
HMGB3P1-201ENST00000393368 SUGT1Q9Y2Z0 365 aa9.42□□□□□ -0.9
HMGB3P1-201ENST00000393368 PCDHB15Q9Y5E8 787 aa9.42□□□□□ -0.9
HMGB3P1-201ENST00000393368 MYH13Q9UKX3 1938 aa9.42□□□□□ -0.9
HMGB3P1-201ENST00000393368 POLR2AP24928 1970 aaKnown RBP9.41□□□□□ -0.9
HMGB3P1-201ENST00000393368 PDS5AQ29RF7 1337 aaKnown RBP9.41□□□□□ -0.9
HMGB3P1-201ENST00000393368 UQCRFS1P1P0C7P4 283 aa9.41□□□□□ -0.9
HMGB3P1-201ENST00000393368 ZAP70P43403 619 aa9.41□□□□□ -0.9
HMGB3P1-201ENST00000393368 ZNF157P51786 506 aaPredicted RBP9.41□□□□□ -0.9
HMGB3P1-201ENST00000393368 HDLBPQ00341 1268 aaKnown RBP9.41□□□□□ -0.9
HMGB3P1-201ENST00000393368 MECOMQ03112 1051 aa9.41□□□□□ -0.9
HMGB3P1-201ENST00000393368 NFIAQ12857 509 aa9.41□□□□□ -0.9
HMGB3P1-201ENST00000393368 MKRN3Q13064 507 aaKnown RBP9.41□□□□□ -0.9
HMGB3P1-201ENST00000393368 MKRN4PQ13434 485 aaPredicted RBP9.41□□□□□ -0.9
HMGB3P1-201ENST00000393368 RGMBQ6NW40 437 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms