RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 IGSF22Q8N9C0 903 aa14.81□□□□□ -0.04
LCA5-202ENST00000392959 MCM9Q9NXL9 1143 aa14.81□□□□□ -0.04
LCA5-202ENST00000392959 RFC4P35249 363 aa14.81□□□□□ -0.04
LCA5-202ENST00000392959 TERF1P54274 439 aa14.81□□□□□ -0.04
LCA5-202ENST00000392959 LEO1Q8WVC0 666 aaPredicted RBP14.81□□□□□ -0.04
LCA5-202ENST00000392959 NGLY1Q96IV0 654 aa14.81□□□□□ -0.04
LCA5-202ENST00000392959 NIP7Q9Y221 180 aaKnown RBP eCLIP14.81□□□□□ -0.04
LCA5-202ENST00000392959 MAP3K19Q56UN5 1328 aa14.81□□□□□ -0.04
LCA5-202ENST00000392959 UHRF1BP1LA0JNW5 1464 aa14.81□□□□□ -0.04
LCA5-202ENST00000392959 VWA3AA6NCI4 1184 aa14.81□□□□□ -0.04
LCA5-202ENST00000392959 TIMM10P62072 90 aa14.81□□□□□ -0.04
LCA5-202ENST00000392959 TNNC1P63316 161 aa14.81□□□□□ -0.04
LCA5-202ENST00000392959 CPLX4Q7Z7G2 160 aa14.81□□□□□ -0.04
LCA5-202ENST00000392959 FAM76AQ8TAV0 307 aa14.81□□□□□ -0.04
LCA5-202ENST00000392959 TTC14Q96N46 770 aa14.81□□□□□ -0.04
LCA5-202ENST00000392959 KCNH3Q9ULD8 1083 aa14.81□□□□□ -0.04
LCA5-202ENST00000392959 MSL1Q68DK7 614 aa14.81□□□□□ -0.04
LCA5-202ENST00000392959 C17orf53Q8N3J3 647 aaPredicted RBP14.81□□□□□ -0.04
LCA5-202ENST00000392959 MRVI1Q9Y6F6 885 aa14.81□□□□□ -0.04
LCA5-202ENST00000392959 TLDC2A0PJX2 215 aa14.8□□□□□ -0.04
LCA5-202ENST00000392959 CCT6AP40227 531 aaKnown RBP14.8□□□□□ -0.04
LCA5-202ENST00000392959 FANCCQ00597 558 aa14.8□□□□□ -0.04
LCA5-202ENST00000392959 RRP36Q96EU6 259 aaKnown RBP14.8□□□□□ -0.04
LCA5-202ENST00000392959 TRIM35Q9UPQ4 493 aa14.8□□□□□ -0.04
LCA5-202ENST00000392959 A2MP01023 1474 aa14.8□□□□□ -0.04
LCA5-202ENST00000392959 IRS4O14654 1257 aaPredicted RBP14.8□□□□□ -0.04
LCA5-202ENST00000392959 ATP2A1O14983 1001 aa14.8□□□□□ -0.04
LCA5-202ENST00000392959 RGS22Q8NE09 1264 aa14.8□□□□□ -0.04
LCA5-202ENST00000392959 ZNF608Q9ULD9 1512 aaPredicted RBP14.8□□□□□ -0.04
LCA5-202ENST00000392959 CHL1O00533 1208 aa14.8□□□□□ -0.04
LCA5-202ENST00000392959 SETDB2Q96T68 719 aa14.8□□□□□ -0.04
LCA5-202ENST00000392959 GADD45BO75293 160 aaPredicted RBP14.8□□□□□ -0.04
LCA5-202ENST00000392959 TBC1D8BQ0IIM8 1120 aa14.8□□□□□ -0.04
LCA5-202ENST00000392959 C10orf67Q8IYJ2 551 aa14.8□□□□□ -0.04
LCA5-202ENST00000392959 SMARCC2Q8TAQ2 1214 aa14.8□□□□□ -0.04
LCA5-202ENST00000392959 PLIN2Q99541 437 aa14.8□□□□□ -0.04
LCA5-202ENST00000392959 NUP153P49790 1475 aaKnown RBP14.79□□□□□ -0.04
LCA5-202ENST00000392959 TMEM87BQ96K49 555 aa14.79□□□□□ -0.04
LCA5-202ENST00000392959 SELENOSQ9BQE4 189 aa14.79□□□□□ -0.04
LCA5-202ENST00000392959 DBNDD2Q9BQY9 259 aa14.79□□□□□ -0.04
LCA5-202ENST00000392959 NCOA5Q9HCD5 579 aaKnown RBP14.79□□□□□ -0.04
LCA5-202ENST00000392959 TCOF1Q13428 1488 aaKnown RBP14.79□□□□□ -0.04
LCA5-202ENST00000392959 CCDC97Q96F63 343 aaPredicted RBP14.79□□□□□ -0.04
LCA5-202ENST00000392959 DCAF5Q96JK2 942 aa14.79□□□□□ -0.04
LCA5-202ENST00000392959 FAM227BQ96M60 508 aa14.79□□□□□ -0.04
LCA5-202ENST00000392959 CARD6Q9BX69 1037 aa14.79□□□□□ -0.04
LCA5-202ENST00000392959 SYNCQ9H7C4 482 aa14.79□□□□□ -0.04
LCA5-202ENST00000392959 TMEM63CQ9P1W3 806 aa14.79□□□□□ -0.04
LCA5-202ENST00000392959 EYA2O00167 538 aa14.79□□□□□ -0.04
LCA5-202ENST00000392959 ZNF174Q15697 407 aa14.79□□□□□ -0.04
LCA5-202ENST00000392959 CEP57Q86XR8 500 aa14.79□□□□□ -0.04
LCA5-202ENST00000392959 ZKSCAN3Q9BRR0 538 aa14.79□□□□□ -0.04
LCA5-202ENST00000392959 ZMYM4Q5VZL5 1548 aa14.79□□□□□ -0.04
LCA5-202ENST00000392959 RIMS2Q9UQ26 1411 aa14.79□□□□□ -0.04
LCA5-202ENST00000392959 A0A1B0GUL7 405 aa14.78□□□□□ -0.04
LCA5-202ENST00000392959 RNMTO43148 476 aaKnown RBP14.78□□□□□ -0.04
LCA5-202ENST00000392959 MBD4O95243 580 aa14.78□□□□□ -0.04
LCA5-202ENST00000392959 TNNI3KQ59H18 835 aa14.78□□□□□ -0.04
LCA5-202ENST00000392959 DZIP3Q86Y13 1208 aaKnown RBP14.78□□□□□ -0.04
LCA5-202ENST00000392959 NAPGQ99747 312 aaPredicted RBP14.78□□□□□ -0.04
LCA5-202ENST00000392959 FPGT-TNNI3KV9GXZ4 949 aa14.78□□□□□ -0.04
LCA5-202ENST00000392959 SYCP2Q9BX26 1530 aa14.78□□□□□ -0.04
LCA5-202ENST00000392959 B4E1Z4 1266 aa14.78□□□□□ -0.04
LCA5-202ENST00000392959 BRD1O95696 1058 aa14.78□□□□□ -0.04
LCA5-202ENST00000392959 VPS16Q9H269 839 aa14.78□□□□□ -0.04
LCA5-202ENST00000392959 BABAM1Q9NWV8 329 aa14.78□□□□□ -0.04
LCA5-202ENST00000392959 TTF2Q9UNY4 1162 aaKnown RBP14.78□□□□□ -0.04
LCA5-202ENST00000392959 SPDYE3A6NKU9 549 aa14.78□□□□□ -0.04
LCA5-202ENST00000392959 WDHD1O75717 1129 aaPredicted RBP14.78□□□□□ -0.04
LCA5-202ENST00000392959 ATP6V1AP38606 617 aa14.78□□□□□ -0.04
LCA5-202ENST00000392959 PPP1R2P41236 205 aa14.78□□□□□ -0.04
LCA5-202ENST00000392959 TTC31Q49AM3 519 aaPredicted RBP14.78□□□□□ -0.04
LCA5-202ENST00000392959 CCDC114Q96M63 670 aa14.78□□□□□ -0.04
LCA5-202ENST00000392959 TSNARE1Q96NA8 513 aa14.78□□□□□ -0.04
LCA5-202ENST00000392959 RBM28Q9NW13 759 aaKnown RBP14.78□□□□□ -0.04
LCA5-202ENST00000392959 MTRF1LQ9UGC7 380 aaKnown RBP14.78□□□□□ -0.04
LCA5-202ENST00000392959 ANGEL1Q9UNK9 670 aaKnown RBP14.78□□□□□ -0.04
LCA5-202ENST00000392959 TUBB2AQ13885 445 aa14.78□□□□□ -0.04
LCA5-202ENST00000392959 TRIM14Q14142 442 aa14.78□□□□□ -0.04
LCA5-202ENST00000392959 TUBB2BQ9BVA1 445 aa14.78□□□□□ -0.04
LCA5-202ENST00000392959 IMPACTQ9P2X3 320 aa14.78□□□□□ -0.04
LCA5-202ENST00000392959 DNAJC5BQ9UF47 199 aa14.78□□□□□ -0.04
LCA5-202ENST00000392959 KAT6BQ8WYB5 2073 aa14.78□□□□□ -0.04
LCA5-202ENST00000392959 DEXIO95424 95 aa14.77□□□□□ -0.04
LCA5-202ENST00000392959 HOXB7P09629 217 aa14.77□□□□□ -0.04
LCA5-202ENST00000392959 ZBTB16Q05516 673 aa14.77□□□□□ -0.04
LCA5-202ENST00000392959 MLKLQ8NB16 471 aa14.77□□□□□ -0.04
LCA5-202ENST00000392959 PPM1EQ8WY54 764 aa14.77□□□□□ -0.04
LCA5-202ENST00000392959 TSGA10Q9BZW7 698 aa14.77□□□□□ -0.04
LCA5-202ENST00000392959 RAPGEF6Q8TEU7 1601 aa14.77□□□□□ -0.04
LCA5-202ENST00000392959 PNMA6EA0A0J9YXQ4 647 aa14.77□□□□□ -0.04
LCA5-202ENST00000392959 IL13P35225 146 aa14.77□□□□□ -0.04
LCA5-202ENST00000392959 PLCB3Q01970 1234 aa14.77□□□□□ -0.04
LCA5-202ENST00000392959 PICALMQ13492 652 aa14.77□□□□□ -0.04
LCA5-202ENST00000392959 ABCC1P33527 1531 aa14.77□□□□□ -0.04
LCA5-202ENST00000392959 F8W031 263 aaPredicted RBP14.77□□□□□ -0.05
LCA5-202ENST00000392959 ARHGAP6O43182 974 aa14.77□□□□□ -0.05
LCA5-202ENST00000392959 FAM13AO94988 1023 aa14.77□□□□□ -0.05
LCA5-202ENST00000392959 ELF2Q15723 593 aa14.77□□□□□ -0.05
LCA5-202ENST00000392959 OTUD7BQ6GQQ9 843 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms