RNA–Protein interactions for RNA: ENST00000392824.8

CSHL1-204, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSHL1, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-204ENST00000392824 SALL1Q9NSC2 1324 aa19.73■□□□□ 0.75
CSHL1-204ENST00000392824 SPDYE2BA6NHP3 402 aa19.72■□□□□ 0.75
CSHL1-204ENST00000392824 TRAF5O00463 557 aa19.72■□□□□ 0.75
CSHL1-204ENST00000392824 SPDYE6P0CI01 402 aa19.72■□□□□ 0.75
CSHL1-204ENST00000392824 ZBED3Q96IU2 234 aaPredicted RBP19.72■□□□□ 0.75
CSHL1-204ENST00000392824 ZNF512BQ96KM6 892 aaPredicted RBP19.72■□□□□ 0.75
CSHL1-204ENST00000392824 PITPNM2Q9BZ72 1349 aa19.72■□□□□ 0.75
CSHL1-204ENST00000392824 MCAMP43121 646 aa19.71■□□□□ 0.75
CSHL1-204ENST00000392824 PRMT6Q96LA8 375 aaPredicted RBP19.71■□□□□ 0.75
CSHL1-204ENST00000392824 ADAMTSL1Q8N6G6 1762 aa19.7■□□□□ 0.74
CSHL1-204ENST00000392824 TMEM88BA6NKF7 163 aa19.7■□□□□ 0.74
CSHL1-204ENST00000392824 PRDX5P30044 214 aa19.7■□□□□ 0.74
CSHL1-204ENST00000392824 IRX6P78412 446 aaPredicted RBP19.7■□□□□ 0.74
CSHL1-204ENST00000392824 PI16Q6UXB8 463 aa19.7■□□□□ 0.74
CSHL1-204ENST00000392824 ERICH6Q7L0X2 663 aa19.7■□□□□ 0.74
CSHL1-204ENST00000392824 RWDD1Q9H446 243 aaPredicted RBP19.7■□□□□ 0.74
CSHL1-204ENST00000392824 SNRKQ9NRH2 765 aa19.7■□□□□ 0.74
CSHL1-204ENST00000392824 ZBTB47Q9UFB7 747 aaPredicted RBP19.7■□□□□ 0.74
CSHL1-204ENST00000392824 PCDHAC2Q9Y5I4 1007 aa19.7■□□□□ 0.74
CSHL1-204ENST00000392824 COL1A1P02452 1464 aaPredicted RBP19.7■□□□□ 0.74
CSHL1-204ENST00000392824 ADM5C9JUS6 153 aa19.69■□□□□ 0.74
CSHL1-204ENST00000392824 SMARCA5O60264 1052 aaPredicted RBP19.69■□□□□ 0.74
CSHL1-204ENST00000392824 HDAC1Q13547 482 aaPredicted RBP19.69■□□□□ 0.74
CSHL1-204ENST00000392824 HHIPL2Q6UWX4 724 aa19.69■□□□□ 0.74
CSHL1-204ENST00000392824 DZIP1Q86YF9 867 aaKnown RBP19.69■□□□□ 0.74
CSHL1-204ENST00000392824 APOBEC3FQ8IUX4 373 aaKnown RBP19.69■□□□□ 0.74
CSHL1-204ENST00000392824 SLF2Q8IX21 1173 aa19.69■□□□□ 0.74
CSHL1-204ENST00000392824 ZNF408Q9H9D4 720 aa19.69■□□□□ 0.74
CSHL1-204ENST00000392824 CELF2O95319 508 aaKnown RBP19.68■□□□□ 0.74
CSHL1-204ENST00000392824 FMR1Q06787 632 aaKnown RBP eCLIP19.68■□□□□ 0.74
CSHL1-204ENST00000392824 TBC1D9Q6ZT07 1266 aa19.68■□□□□ 0.74
CSHL1-204ENST00000392824 ZDHHC15Q96MV8 337 aa19.68■□□□□ 0.74
CSHL1-204ENST00000392824 VEZTQ9HBM0 779 aa19.68■□□□□ 0.74
CSHL1-204ENST00000392824 CREBZFQ9NS37 354 aa19.68■□□□□ 0.74
CSHL1-204ENST00000392824 RAI14Q9P0K7 980 aa19.68■□□□□ 0.74
CSHL1-204ENST00000392824 LRP2BPQ9P2M1 347 aa19.68■□□□□ 0.74
CSHL1-204ENST00000392824 CLRN2A0PK11 232 aa19.67■□□□□ 0.74
CSHL1-204ENST00000392824 GCC1Q96CN9 775 aa19.67■□□□□ 0.74
CSHL1-204ENST00000392824 TDRD3Q9H7E2 651 aaKnown RBP19.67■□□□□ 0.74
CSHL1-204ENST00000392824 ZAP70P43403 619 aa19.66■□□□□ 0.74
CSHL1-204ENST00000392824 HTRA3P83110 453 aa19.66■□□□□ 0.74
CSHL1-204ENST00000392824 DIXDC1Q155Q3 683 aa19.66■□□□□ 0.74
CSHL1-204ENST00000392824 DLK2Q6UY11 383 aa19.66■□□□□ 0.74
CSHL1-204ENST00000392824 TMOD2Q9NZR1 351 aa19.66■□□□□ 0.74
CSHL1-204ENST00000392824 ZNF70Q9UC06 446 aaPredicted RBP19.66■□□□□ 0.74
CSHL1-204ENST00000392824 SCAF8Q9UPN6 1271 aaKnown RBP19.66■□□□□ 0.74
CSHL1-204ENST00000392824 ARAP2Q8WZ64 1704 aa19.65■□□□□ 0.74
CSHL1-204ENST00000392824 ZNF646O15015 1829 aaPredicted RBP19.65■□□□□ 0.74
CSHL1-204ENST00000392824 GSTO1P78417 241 aa19.65■□□□□ 0.74
CSHL1-204ENST00000392824 TNFAIP1Q13829 316 aa19.65■□□□□ 0.74
CSHL1-204ENST00000392824 CDCA5Q96FF9 252 aa19.65■□□□□ 0.74
CSHL1-204ENST00000392824 ABT1Q9ULW3 272 aaKnown RBP19.65■□□□□ 0.74
CSHL1-204ENST00000392824 CYP2E1P05181 493 aaPredicted RBP19.64■□□□□ 0.73
CSHL1-204ENST00000392824 LDHCP07864 332 aa19.64■□□□□ 0.73
CSHL1-204ENST00000392824 MECOMQ03112 1051 aa19.64■□□□□ 0.73
CSHL1-204ENST00000392824 SPDYE2Q495Y8 402 aa19.64■□□□□ 0.73
CSHL1-204ENST00000392824 ANKRD45Q5TZF3 282 aa19.64■□□□□ 0.73
CSHL1-204ENST00000392824 CST9Q5W186 159 aa19.64■□□□□ 0.73
CSHL1-204ENST00000392824 APOBEC3HQ6NTF7 200 aaKnown RBP19.64■□□□□ 0.73
CSHL1-204ENST00000392824 GPATCH3Q96I76 525 aa19.64■□□□□ 0.73
CSHL1-204ENST00000392824 DEFB129Q9H1M3 183 aa19.64■□□□□ 0.73
CSHL1-204ENST00000392824 DAGLAQ9Y4D2 1042 aa19.64■□□□□ 0.73
CSHL1-204ENST00000392824 IGSF3O75054 1194 aa19.63■□□□□ 0.73
CSHL1-204ENST00000392824 NF2P35240 595 aa19.63■□□□□ 0.73
CSHL1-204ENST00000392824 TNNI2P48788 182 aa19.63■□□□□ 0.73
CSHL1-204ENST00000392824 C2orf69Q8N8R5 385 aa19.63■□□□□ 0.73
CSHL1-204ENST00000392824 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.63■□□□□ 0.73
CSHL1-204ENST00000392824 FAM163AQ96GL9 167 aaPredicted RBP19.63■□□□□ 0.73
CSHL1-204ENST00000392824 PPP2R3BQ9Y5P8 575 aa19.63■□□□□ 0.73
CSHL1-204ENST00000392824 AOX1Q06278 1338 aa19.62■□□□□ 0.73
CSHL1-204ENST00000392824 ATP5JP18859 108 aa19.62■□□□□ 0.73
CSHL1-204ENST00000392824 TTF1Q15361 905 aaPredicted RBP19.62■□□□□ 0.73
CSHL1-204ENST00000392824 PRAMEF18Q5VWM3 479 aa19.62■□□□□ 0.73
CSHL1-204ENST00000392824 NSUN4Q96CB9 384 aaKnown RBP19.62■□□□□ 0.73
CSHL1-204ENST00000392824 TCP10L2B9ZVM9 353 aa19.61■□□□□ 0.73
CSHL1-204ENST00000392824 RASA3Q14644 834 aa19.61■□□□□ 0.73
CSHL1-204ENST00000392824 DNAJC2Q99543 621 aaKnown RBP19.61■□□□□ 0.73
CSHL1-204ENST00000392824 NOL10Q9BSC4 688 aaKnown RBP19.61■□□□□ 0.73
CSHL1-204ENST00000392824 BOLA2Q9H3K6 86 aa19.61■□□□□ 0.73
CSHL1-204ENST00000392824 GBA2Q9HCG7 927 aaPredicted RBP19.61■□□□□ 0.73
CSHL1-204ENST00000392824 PIH1D3Q9NQM4 214 aaKnown RBP19.61■□□□□ 0.73
CSHL1-204ENST00000392824 ECHDC1Q9NTX5 307 aa19.61■□□□□ 0.73
CSHL1-204ENST00000392824 USP40Q9NVE5 1235 aa19.61■□□□□ 0.73
CSHL1-204ENST00000392824 NDUFB9Q9Y6M9 179 aa19.61■□□□□ 0.73
CSHL1-204ENST00000392824 IDH1O75874 414 aaKnown RBP19.6■□□□□ 0.73
CSHL1-204ENST00000392824 CENPBP07199 599 aaPredicted RBP19.6■□□□□ 0.73
CSHL1-204ENST00000392824 MAP3K12Q12852 859 aa19.6■□□□□ 0.73
CSHL1-204ENST00000392824 SUPT20HL1Q3ZLR7 823 aa19.6■□□□□ 0.73
CSHL1-204ENST00000392824 NAA16Q6N069 864 aaPredicted RBP19.6■□□□□ 0.73
CSHL1-204ENST00000392824 CDC42EP5Q6NZY7 148 aa19.6■□□□□ 0.73
CSHL1-204ENST00000392824 MROH7-TTC4A0A0A0MT08 1334 aa19.59■□□□□ 0.73
CSHL1-204ENST00000392824 GAKO14976 1311 aa19.59■□□□□ 0.73
CSHL1-204ENST00000392824 IGHDP01880 384 aa19.59■□□□□ 0.73
CSHL1-204ENST00000392824 BTDP43251 543 aa19.59■□□□□ 0.73
CSHL1-204ENST00000392824 CACNB3P54284 484 aa19.59■□□□□ 0.73
CSHL1-204ENST00000392824 TTLL12Q14166 644 aaPredicted RBP19.59■□□□□ 0.73
CSHL1-204ENST00000392824 DEFB115Q30KQ5 88 aa19.59■□□□□ 0.73
CSHL1-204ENST00000392824 FKBP1CQ5VVH2 108 aa19.59■□□□□ 0.73
CSHL1-204ENST00000392824 TLL2Q9Y6L7 1015 aa19.59■□□□□ 0.73
CSHL1-204ENST00000392824 GPR75-ASB3A0A0A6YYF3 556 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms