RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 ZSCAN16Q9H4T2 348 aaPredicted RBP12.61□□□□□ -0.39
BRF1-204ENST00000392557 SEC31BQ9NQW1 1179 aa12.61□□□□□ -0.39
BRF1-204ENST00000392557 MAST3O60307 1309 aa12.61□□□□□ -0.39
BRF1-204ENST00000392557 ERICH4A6NGS2 130 aa12.61□□□□□ -0.39
BRF1-204ENST00000392557 PDE8AO60658 829 aa12.61□□□□□ -0.39
BRF1-204ENST00000392557 SCRN1Q12765 414 aa12.61□□□□□ -0.39
BRF1-204ENST00000392557 OSBP2Q969R2 916 aa12.61□□□□□ -0.39
BRF1-204ENST00000392557 USP28Q96RU2 1077 aa12.61□□□□□ -0.39
BRF1-204ENST00000392557 GPR108Q9NPR9 543 aa12.61□□□□□ -0.39
BRF1-204ENST00000392557 ANO10Q9NW15 660 aa12.61□□□□□ -0.39
BRF1-204ENST00000392557 TDRD7Q8NHU6 1098 aaKnown RBP12.61□□□□□ -0.39
BRF1-204ENST00000392557 GTPBP4Q9BZE4 634 aaKnown RBP12.61□□□□□ -0.39
BRF1-204ENST00000392557 CGNQ9P2M7 1197 aaKnown RBP12.61□□□□□ -0.39
BRF1-204ENST00000392557 IQSEC3Q9UPP2 1182 aaPredicted RBP12.61□□□□□ -0.39
BRF1-204ENST00000392557 UBR2Q8IWV8 1755 aa12.61□□□□□ -0.39
BRF1-204ENST00000392557 HSPD1P10809 573 aaKnown RBP12.6□□□□□ -0.39
BRF1-204ENST00000392557 LRRC8AQ8IWT6 810 aa12.6□□□□□ -0.39
BRF1-204ENST00000392557 ZNF215Q9UL58 517 aaPredicted RBP12.6□□□□□ -0.39
BRF1-204ENST00000392557 DISP2A7MBM2 1401 aa12.6□□□□□ -0.39
BRF1-204ENST00000392557 CSF1RP07333 972 aa12.6□□□□□ -0.39
BRF1-204ENST00000392557 TMC6Q7Z403 805 aa12.6□□□□□ -0.39
BRF1-204ENST00000392557 KIF18AQ8NI77 898 aa12.6□□□□□ -0.39
BRF1-204ENST00000392557 TPM4P67936 248 aa12.6□□□□□ -0.39
BRF1-204ENST00000392557 ZMYM1Q5SVZ6 1142 aa12.6□□□□□ -0.39
BRF1-204ENST00000392557 SYNE3Q6ZMZ3 975 aa12.6□□□□□ -0.39
BRF1-204ENST00000392557 STOX1Q6ZVD7 989 aa12.6□□□□□ -0.39
BRF1-204ENST00000392557 CCDC24Q8N4L8 307 aa12.6□□□□□ -0.39
BRF1-204ENST00000392557 SH3TC1Q8TE82 1336 aa12.59□□□□□ -0.39
BRF1-204ENST00000392557 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.59□□□□□ -0.39
BRF1-204ENST00000392557 PLA2G4DQ86XP0 818 aa12.59□□□□□ -0.39
BRF1-204ENST00000392557 UTP14AQ9BVJ6 771 aaKnown RBP12.59□□□□□ -0.39
BRF1-204ENST00000392557 CDCA7Q9BWT1 371 aaPredicted RBP12.59□□□□□ -0.39
BRF1-204ENST00000392557 HELLSQ9NRZ9 838 aa12.59□□□□□ -0.39
BRF1-204ENST00000392557 ITGB4P16144 1822 aa12.59□□□□□ -0.39
BRF1-204ENST00000392557 PHKA1P46020 1223 aa12.59□□□□□ -0.39
BRF1-204ENST00000392557 RESTQ13127 1097 aa12.59□□□□□ -0.39
BRF1-204ENST00000392557 ELF2Q15723 593 aa12.59□□□□□ -0.39
BRF1-204ENST00000392557 SLC9C2Q5TAH2 1124 aa12.59□□□□□ -0.39
BRF1-204ENST00000392557 INTS5Q6P9B9 1019 aaKnown RBP12.59□□□□□ -0.39
BRF1-204ENST00000392557 KCNB2Q92953 911 aa12.59□□□□□ -0.39
BRF1-204ENST00000392557 OGFRQ9NZT2 677 aa12.59□□□□□ -0.39
BRF1-204ENST00000392557 RIPOR2Q9Y4F9 1068 aa12.59□□□□□ -0.39
BRF1-204ENST00000392557 COL14A1Q05707 1796 aaKnown RBP12.59□□□□□ -0.39
BRF1-204ENST00000392557 PALLDQ8WX93 1383 aa12.59□□□□□ -0.39
BRF1-204ENST00000392557 MCAMP43121 646 aa12.59□□□□□ -0.39
BRF1-204ENST00000392557 PTF1AQ7RTS3 328 aa12.59□□□□□ -0.39
BRF1-204ENST00000392557 PUS7LQ9H0K6 701 aaKnown RBP12.59□□□□□ -0.39
BRF1-204ENST00000392557 CTAGE5O15320 804 aa12.58□□□□□ -0.4
BRF1-204ENST00000392557 EIF5P55010 431 aaKnown RBP12.58□□□□□ -0.4
BRF1-204ENST00000392557 NUP188Q5SRE5 1749 aa12.58□□□□□ -0.4
BRF1-204ENST00000392557 HSP90AA4PQ58FG1 418 aa12.58□□□□□ -0.4
BRF1-204ENST00000392557 DHX32Q7L7V1 743 aaKnown RBP12.58□□□□□ -0.4
BRF1-204ENST00000392557 FEZ1Q99689 392 aa12.58□□□□□ -0.4
BRF1-204ENST00000392557 SPATA31A5Q5VU36 1347 aa12.58□□□□□ -0.4
BRF1-204ENST00000392557 SPATA31A7Q8IWB4 1347 aa12.58□□□□□ -0.4
BRF1-204ENST00000392557 SFPQP23246 707 aaKnown RBP eCLIP12.58□□□□□ -0.4
BRF1-204ENST00000392557 LRRFIP1Q32MZ4 808 aaKnown RBP12.58□□□□□ -0.4
BRF1-204ENST00000392557 GOLPH3LQ9H4A5 285 aa12.58□□□□□ -0.4
BRF1-204ENST00000392557 TJP1Q07157 1748 aa12.57□□□□□ -0.4
BRF1-204ENST00000392557 PDE8BO95263 885 aa12.57□□□□□ -0.4
BRF1-204ENST00000392557 SNW1Q13573 536 aaKnown RBP12.57□□□□□ -0.4
BRF1-204ENST00000392557 ANKRD7Q92527 254 aa12.57□□□□□ -0.4
BRF1-204ENST00000392557 PLA2G12BQ9BX93 195 aa12.57□□□□□ -0.4
BRF1-204ENST00000392557 TMX1Q9H3N1 280 aa12.57□□□□□ -0.4
BRF1-204ENST00000392557 IFNKQ9P0W0 207 aa12.57□□□□□ -0.4
BRF1-204ENST00000392557 ERVV-1B6SEH8 477 aa12.57□□□□□ -0.4
BRF1-204ENST00000392557 E7EWF7 191 aa12.57□□□□□ -0.4
BRF1-204ENST00000392557 CAVIN2O95810 425 aa12.57□□□□□ -0.4
BRF1-204ENST00000392557 LMOD1P29536 600 aaPredicted RBP12.57□□□□□ -0.4
BRF1-204ENST00000392557 GPHNQ9NQX3 736 aaPredicted RBP12.57□□□□□ -0.4
BRF1-204ENST00000392557 CDHR2Q9BYE9 1310 aa12.57□□□□□ -0.4
BRF1-204ENST00000392557 FAM160A1Q05DH4 1040 aa12.56□□□□□ -0.4
BRF1-204ENST00000392557 UTP14CQ5TAP6 766 aaKnown RBP12.56□□□□□ -0.4
BRF1-204ENST00000392557 USPL1Q5W0Q7 1092 aa12.56□□□□□ -0.4
BRF1-204ENST00000392557 CCDC102BQ68D86 513 aa12.56□□□□□ -0.4
BRF1-204ENST00000392557 ZNF34Q8IZ26 560 aa12.56□□□□□ -0.4
BRF1-204ENST00000392557 CCAR2Q8N163 923 aaKnown RBP12.56□□□□□ -0.4
BRF1-204ENST00000392557 C8orf76Q96K31 380 aa12.56□□□□□ -0.4
BRF1-204ENST00000392557 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.56□□□□□ -0.41e-6■■■■□ 26.5
BRF1-204ENST00000392557 THRAP3Q9Y2W1 955 aaKnown RBP12.56□□□□□ -0.4
BRF1-204ENST00000392557 GPAA1O43292 621 aa12.56□□□□□ -0.4
BRF1-204ENST00000392557 CTIFO43310 598 aaKnown RBP12.56□□□□□ -0.4
BRF1-204ENST00000392557 MARCKSP29966 332 aaPredicted RBP12.56□□□□□ -0.4
BRF1-204ENST00000392557 PTPN21Q16825 1174 aa12.56□□□□□ -0.4
BRF1-204ENST00000392557 SYT10Q6XYQ8 523 aa12.56□□□□□ -0.4
BRF1-204ENST00000392557 MRPS27Q92552 414 aaKnown RBP12.56□□□□□ -0.4
BRF1-204ENST00000392557 PAPPAQ13219 1627 aa12.56□□□□□ -0.4
BRF1-204ENST00000392557 SERPINC1P01008 464 aa12.56□□□□□ -0.4
BRF1-204ENST00000392557 IGHMBP2P38935 993 aaKnown RBP12.56□□□□□ -0.4
BRF1-204ENST00000392557 IMMTQ16891 758 aaKnown RBP12.56□□□□□ -0.4
BRF1-204ENST00000392557 ZBTB9Q96C00 473 aa12.56□□□□□ -0.4
BRF1-204ENST00000392557 NEMFO60524 1076 aa12.55□□□□□ -0.4
BRF1-204ENST00000392557 RALYLQ86SE5 291 aaKnown RBP12.55□□□□□ -0.4
BRF1-204ENST00000392557 NSUN7Q8NE18 718 aaKnown RBP12.55□□□□□ -0.4
BRF1-204ENST00000392557 DSCC1Q9BVC3 393 aa12.55□□□□□ -0.4
BRF1-204ENST00000392557 FGAP02671 866 aa12.55□□□□□ -0.4
BRF1-204ENST00000392557 HMGB1P09429 215 aaKnown RBP12.55□□□□□ -0.4
BRF1-204ENST00000392557 BRD2P25440 801 aaKnown RBP12.55□□□□□ -0.4
BRF1-204ENST00000392557 COL16A1Q07092 1604 aaPredicted RBP12.55□□□□□ -0.4
BRF1-204ENST00000392557 PDILTQ8N807 584 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms