RNA–Protein interactions for RNA: ENST00000392345.6

CCDC57-204, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC57, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-204ENST00000392345 SLC10A3P09131 477 aa17.26■□□□□ 0.35
CCDC57-204ENST00000392345 CTCFP49711 727 aaPredicted RBP17.26■□□□□ 0.35
CCDC57-204ENST00000392345 LBX1P52954 281 aa17.26■□□□□ 0.35
CCDC57-204ENST00000392345 TTLL12Q14166 644 aaPredicted RBP17.26■□□□□ 0.35
CCDC57-204ENST00000392345 CDAN1Q8IWY9 1227 aa17.26■□□□□ 0.35
CCDC57-204ENST00000392345 ZNF70Q9UC06 446 aaPredicted RBP17.26■□□□□ 0.35
CCDC57-204ENST00000392345 ECM29Q5VYK3 1845 aa17.26■□□□□ 0.35
CCDC57-204ENST00000392345 MYO1BO43795 1136 aa17.25■□□□□ 0.35
CCDC57-204ENST00000392345 FKBP1BP68106 108 aa17.25■□□□□ 0.35
CCDC57-204ENST00000392345 NOGQ13253 232 aa17.25■□□□□ 0.35
CCDC57-204ENST00000392345 POLA2Q14181 598 aa17.25■□□□□ 0.35
CCDC57-204ENST00000392345 CCDC102BQ68D86 513 aa17.25■□□□□ 0.35
CCDC57-204ENST00000392345 PRDX5P30044 214 aa17.24■□□□□ 0.35
CCDC57-204ENST00000392345 CACNB3P54284 484 aa17.24■□□□□ 0.35
CCDC57-204ENST00000392345 RASA3Q14644 834 aa17.24■□□□□ 0.35
CCDC57-204ENST00000392345 SSH3Q8TE77 659 aa17.24■□□□□ 0.35
CCDC57-204ENST00000392345 XAGE2Q96GT9 111 aa17.24■□□□□ 0.35
CCDC57-204ENST00000392345 TCP10L2B9ZVM9 353 aa17.23■□□□□ 0.35
CCDC57-204ENST00000392345 NF2P35240 595 aa17.23■□□□□ 0.35
CCDC57-204ENST00000392345 KIF23Q02241 960 aaPredicted RBP17.23■□□□□ 0.35
CCDC57-204ENST00000392345 RASGRF1Q13972 1273 aa17.23■□□□□ 0.35
CCDC57-204ENST00000392345 DIXDC1Q155Q3 683 aa17.23■□□□□ 0.35
CCDC57-204ENST00000392345 NBPF12Q5TAG4 269 aaPredicted RBP17.23■□□□□ 0.35
CCDC57-204ENST00000392345 WDR66Q8TBY9 1149 aa17.23■□□□□ 0.35
CCDC57-204ENST00000392345 TEKT1Q969V4 418 aa17.23■□□□□ 0.35
CCDC57-204ENST00000392345 RCAN3Q9UKA8 241 aa17.23■□□□□ 0.35
CCDC57-204ENST00000392345 ATP8B2P98198 1209 aa17.22■□□□□ 0.35
CCDC57-204ENST00000392345 HDLBPQ00341 1268 aaKnown RBP17.22■□□□□ 0.35
CCDC57-204ENST00000392345 G3BP1Q13283 466 aaKnown RBP eCLIP17.22■□□□□ 0.35
CCDC57-204ENST00000392345 APOBEC3HQ6NTF7 200 aaKnown RBP17.22■□□□□ 0.35
CCDC57-204ENST00000392345 CEP85Q6P2H3 762 aa17.22■□□□□ 0.35
CCDC57-204ENST00000392345 CCDC102AQ96A19 550 aa17.22■□□□□ 0.35
CCDC57-204ENST00000392345 ZDHHC15Q96MV8 337 aa17.22■□□□□ 0.35
CCDC57-204ENST00000392345 GNL3LQ9NVN8 582 aaKnown RBP17.22■□□□□ 0.35
CCDC57-204ENST00000392345 ANGEL1Q9UNK9 670 aaKnown RBP17.22■□□□□ 0.35
CCDC57-204ENST00000392345 SUGT1Q9Y2Z0 365 aa17.22■□□□□ 0.35
CCDC57-204ENST00000392345 PPP2R3BQ9Y5P8 575 aa17.22■□□□□ 0.35
CCDC57-204ENST00000392345 MYH13Q9UKX3 1938 aa17.21■□□□□ 0.35
CCDC57-204ENST00000392345 MKRN3Q13064 507 aaKnown RBP17.21■□□□□ 0.35
CCDC57-204ENST00000392345 IFFO2Q5TF58 517 aa17.21■□□□□ 0.35
CCDC57-204ENST00000392345 PI16Q6UXB8 463 aa17.21■□□□□ 0.35
CCDC57-204ENST00000392345 TEPSINQ96N21 525 aa17.21■□□□□ 0.35
CCDC57-204ENST00000392345 NEUROD6Q96NK8 337 aa17.21■□□□□ 0.35
CCDC57-204ENST00000392345 TMEM39BQ9GZU3 492 aa17.21■□□□□ 0.35
CCDC57-204ENST00000392345 PRDM10Q9NQV6 1147 aa17.21■□□□□ 0.35
CCDC57-204ENST00000392345 DENND2AQ9ULE3 1009 aa17.21■□□□□ 0.35
CCDC57-204ENST00000392345 AKAP2Q9Y2D5 859 aa17.21■□□□□ 0.35
CCDC57-204ENST00000392345 SEMA3EO15041 775 aa17.2■□□□□ 0.34
CCDC57-204ENST00000392345 LDLRAD1Q5T700 205 aa17.2■□□□□ 0.34
CCDC57-204ENST00000392345 C20orf194Q5TEA3 1177 aa17.2■□□□□ 0.34
CCDC57-204ENST00000392345 ARMC9Q7Z3E5 817 aa17.2■□□□□ 0.34
CCDC57-204ENST00000392345 TNS4Q8IZW8 715 aa17.2■□□□□ 0.34
CCDC57-204ENST00000392345 CLMNQ96JQ2 1002 aa17.2■□□□□ 0.34
CCDC57-204ENST00000392345 BEGAINQ9BUH8 593 aa17.2■□□□□ 0.34
CCDC57-204ENST00000392345 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.2■□□□□ 0.34
CCDC57-204ENST00000392345 COG6Q9Y2V7 657 aa17.2■□□□□ 0.34
CCDC57-204ENST00000392345 DAGLAQ9Y4D2 1042 aa17.2■□□□□ 0.34
CCDC57-204ENST00000392345 MAST3O60307 1309 aa17.2■□□□□ 0.34
CCDC57-204ENST00000392345 SALL1Q9NSC2 1324 aa17.2■□□□□ 0.34
CCDC57-204ENST00000392345 SURF6O75683 361 aaKnown RBP17.19■□□□□ 0.34
CCDC57-204ENST00000392345 MVPQ14764 893 aaKnown RBP17.19■□□□□ 0.34
CCDC57-204ENST00000392345 HHIPL2Q6UWX4 724 aa17.19■□□□□ 0.34
CCDC57-204ENST00000392345 CSRNP1Q96S65 589 aa17.19■□□□□ 0.34
CCDC57-204ENST00000392345 LDHBP07195 334 aaKnown RBP17.18■□□□□ 0.34
CCDC57-204ENST00000392345 OS9Q13438 667 aaPredicted RBP17.18■□□□□ 0.34
CCDC57-204ENST00000392345 TNFAIP1Q13829 316 aa17.18■□□□□ 0.34
CCDC57-204ENST00000392345 MRIQ9BWK5 157 aa17.18■□□□□ 0.34
CCDC57-204ENST00000392345 ZBTB22O15209 634 aa17.17■□□□□ 0.34
CCDC57-204ENST00000392345 MAP3K11Q16584 847 aa17.17■□□□□ 0.34
CCDC57-204ENST00000392345 SUPT20HL1Q3ZLR7 823 aa17.17■□□□□ 0.34
CCDC57-204ENST00000392345 TNNI3KQ59H18 835 aa17.17■□□□□ 0.34
CCDC57-204ENST00000392345 DBNDD2Q9BQY9 259 aa17.17■□□□□ 0.34
CCDC57-204ENST00000392345 TLR7Q9NYK1 1049 aaKnown RBP17.17■□□□□ 0.34
CCDC57-204ENST00000392345 HMG20BQ9P0W2 317 aa17.17■□□□□ 0.34
CCDC57-204ENST00000392345 NOP58Q9Y2X3 529 aaKnown RBP17.17■□□□□ 0.34
CCDC57-204ENST00000392345 FPGT-TNNI3KV9GXZ4 949 aa17.17■□□□□ 0.34
CCDC57-204ENST00000392345 PDS5AQ29RF7 1337 aaKnown RBP17.17■□□□□ 0.34
CCDC57-204ENST00000392345 PPP1R12BO60237 982 aaPredicted RBP17.16■□□□□ 0.34
CCDC57-204ENST00000392345 USP2O75604 605 aaPredicted RBP17.16■□□□□ 0.34
CCDC57-204ENST00000392345 MCAMP43121 646 aa17.16■□□□□ 0.34
CCDC57-204ENST00000392345 GORABQ5T7V8 394 aa17.16■□□□□ 0.34
CCDC57-204ENST00000392345 CDC42EP5Q6NZY7 148 aa17.16■□□□□ 0.34
CCDC57-204ENST00000392345 ZNF384Q8TF68 577 aa17.16■□□□□ 0.34
CCDC57-204ENST00000392345 ABCF2Q9UG63 623 aa17.16■□□□□ 0.34
CCDC57-204ENST00000392345 EXOC6BQ9Y2D4 811 aa17.16■□□□□ 0.34
CCDC57-204ENST00000392345 CA12O43570 354 aa17.15■□□□□ 0.34
CCDC57-204ENST00000392345 ARID4AP29374 1257 aaPredicted RBP17.15■□□□□ 0.34
CCDC57-204ENST00000392345 GJA5P36382 358 aa17.15■□□□□ 0.34
CCDC57-204ENST00000392345 NFIAQ12857 509 aa17.15■□□□□ 0.34
CCDC57-204ENST00000392345 TBC1D9Q6ZT07 1266 aa17.15■□□□□ 0.34
CCDC57-204ENST00000392345 ZBTB40Q9NUA8 1239 aa17.15■□□□□ 0.34
CCDC57-204ENST00000392345 RNF186Q9NXI6 227 aa17.15■□□□□ 0.34
CCDC57-204ENST00000392345 GAKO14976 1311 aa17.15■□□□□ 0.34
CCDC57-204ENST00000392345 OTOFQ9HC10 1997 aa17.15■□□□□ 0.34
CCDC57-204ENST00000392345 TRPA1O75762 1119 aa17.14■□□□□ 0.33
CCDC57-204ENST00000392345 MS4A1P11836 297 aa17.14■□□□□ 0.33
CCDC57-204ENST00000392345 TNNI2P48788 182 aa17.14■□□□□ 0.33
CCDC57-204ENST00000392345 SPRYD7Q5W111 196 aa17.14■□□□□ 0.33
CCDC57-204ENST00000392345 DZIP1Q86YF9 867 aaKnown RBP17.14■□□□□ 0.33
CCDC57-204ENST00000392345 SIRT2Q8IXJ6 389 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms