RNA–Protein interactions for RNA: ENST00000391303.1

RNU1-56P-201, Transcript of RNA, U1 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU1-56P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-56P-201ENST00000391303 MCOLN1Q9GZU1 580 aa8.78□□□□□ -1
RNU1-56P-201ENST00000391303 TMOD2Q9NZR1 351 aa8.78□□□□□ -1
RNU1-56P-201ENST00000391303 ZNF70Q9UC06 446 aaPredicted RBP8.78□□□□□ -1
RNU1-56P-201ENST00000391303 ANGEL1Q9UNK9 670 aaKnown RBP8.78□□□□□ -1
RNU1-56P-201ENST00000391303 TAF1P21675 1872 aa8.78□□□□□ -1
RNU1-56P-201ENST00000391303 PDS5AQ29RF7 1337 aaKnown RBP8.78□□□□□ -1
RNU1-56P-201ENST00000391303 SALL1Q9NSC2 1324 aa8.78□□□□□ -1
RNU1-56P-201ENST00000391303 CACNA1FO60840 1977 aa8.77□□□□□ -1
RNU1-56P-201ENST00000391303 SCN9AQ15858 1988 aa8.77□□□□□ -1
RNU1-56P-201ENST00000391303 CLRN2A0PK11 232 aa8.77□□□□□ -1.01
RNU1-56P-201ENST00000391303 TESPA1A2RU30 521 aaPredicted RBP8.77□□□□□ -1.01
RNU1-56P-201ENST00000391303 IGSF3O75054 1194 aa8.77□□□□□ -1.01
RNU1-56P-201ENST00000391303 DGKZQ13574 1117 aa8.77□□□□□ -1.01
RNU1-56P-201ENST00000391303 MOB2Q70IA6 237 aa8.77□□□□□ -1.01
RNU1-56P-201ENST00000391303 ATG9AQ7Z3C6 839 aa8.77□□□□□ -1.01
RNU1-56P-201ENST00000391303 ZGPATQ8N5A5 531 aaKnown RBP8.77□□□□□ -1.01
RNU1-56P-201ENST00000391303 VEZTQ9HBM0 779 aa8.77□□□□□ -1.01
RNU1-56P-201ENST00000391303 TSKSQ9UJT2 592 aa8.77□□□□□ -1.01
RNU1-56P-201ENST00000391303 AKAP2Q9Y2D5 859 aa8.77□□□□□ -1.01
RNU1-56P-201ENST00000391303 TRPM7Q96QT4 1865 aa8.77□□□□□ -1.01
RNU1-56P-201ENST00000391303 RPAP1Q9BWH6 1393 aaPredicted RBP8.76□□□□□ -1.01
RNU1-56P-201ENST00000391303 USP2O75604 605 aaPredicted RBP8.76□□□□□ -1.01
RNU1-56P-201ENST00000391303 BCAMP50895 628 aa8.76□□□□□ -1.01
RNU1-56P-201ENST00000391303 ATP2B3Q16720 1220 aa8.76□□□□□ -1.01
RNU1-56P-201ENST00000391303 ATF7IPQ6VMQ6 1270 aa8.76□□□□□ -1.01
RNU1-56P-201ENST00000391303 TEPSINQ96N21 525 aa8.76□□□□□ -1.01
RNU1-56P-201ENST00000391303 TDRD3Q9H7E2 651 aaKnown RBP8.76□□□□□ -1.01
RNU1-56P-201ENST00000391303 DENND2AQ9ULE3 1009 aa8.76□□□□□ -1.01
RNU1-56P-201ENST00000391303 GPR25O00155 361 aa8.75□□□□□ -1.01
RNU1-56P-201ENST00000391303 MAP4K4O95819 1239 aaPredicted RBP8.75□□□□□ -1.01
RNU1-56P-201ENST00000391303 CHAF1AQ13111 956 aaPredicted RBP8.75□□□□□ -1.01
RNU1-56P-201ENST00000391303 NBPF12Q5TAG4 269 aaPredicted RBP8.75□□□□□ -1.01
RNU1-56P-201ENST00000391303 DCAF15Q66K64 600 aa8.75□□□□□ -1.01
RNU1-56P-201ENST00000391303 APOBEC3HQ6NTF7 200 aaKnown RBP8.75□□□□□ -1.01
RNU1-56P-201ENST00000391303 IFNL1Q8IU54 200 aa8.75□□□□□ -1.01
RNU1-56P-201ENST00000391303 SLF2Q8IX21 1173 aa8.75□□□□□ -1.01
RNU1-56P-201ENST00000391303 KLHDC4Q8TBB5 520 aa8.75□□□□□ -1.01
RNU1-56P-201ENST00000391303 WNK4Q96J92 1243 aa8.75□□□□□ -1.01
RNU1-56P-201ENST00000391303 ZCCHC17Q9NP64 241 aaKnown RBP8.75□□□□□ -1.01
RNU1-56P-201ENST00000391303 SCAF8Q9UPN6 1271 aaKnown RBP8.75□□□□□ -1.01
RNU1-56P-201ENST00000391303 JAG2Q9Y219 1238 aa8.75□□□□□ -1.01
RNU1-56P-201ENST00000391303 LRRFIP2Q9Y608 721 aaKnown RBP8.75□□□□□ -1.01
RNU1-56P-201ENST00000391303 PSME4Q14997 1843 aa8.75□□□□□ -1.01
RNU1-56P-201ENST00000391303 PCNTO95613 3336 aa8.75□□□□□ -1.01
RNU1-56P-201ENST00000391303 MYH3P11055 1940 aa8.74□□□□□ -1.01
RNU1-56P-201ENST00000391303 CCDC85CA6NKD9 419 aa8.74□□□□□ -1.01
RNU1-56P-201ENST00000391303 FKTNO75072 461 aa8.74□□□□□ -1.01
RNU1-56P-201ENST00000391303 WDHD1O75717 1129 aaPredicted RBP8.74□□□□□ -1.01
RNU1-56P-201ENST00000391303 GNAI2P04899 355 aa8.74□□□□□ -1.01
RNU1-56P-201ENST00000391303 TRIM27P14373 513 aa8.74□□□□□ -1.01
RNU1-56P-201ENST00000391303 MAP3K9P80192 1104 aa8.74□□□□□ -1.01
RNU1-56P-201ENST00000391303 MVPQ14764 893 aaKnown RBP8.74□□□□□ -1.01
RNU1-56P-201ENST00000391303 ARHGEF6Q15052 776 aa8.74□□□□□ -1.01
RNU1-56P-201ENST00000391303 SPTY2D1Q68D10 685 aaPredicted RBP8.74□□□□□ -1.01
RNU1-56P-201ENST00000391303 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.74□□□□□ -1.01
RNU1-56P-201ENST00000391303 ZNF296Q8WUU4 475 aaPredicted RBP8.74□□□□□ -1.01
RNU1-56P-201ENST00000391303 FAM163AQ96GL9 167 aaPredicted RBP8.74□□□□□ -1.01
RNU1-56P-201ENST00000391303 MEIS3Q99687 375 aa8.74□□□□□ -1.01
RNU1-56P-201ENST00000391303 PCDHAC2Q9Y5I4 1007 aa8.74□□□□□ -1.01
RNU1-56P-201ENST00000391303 CSADQ9Y600 493 aa8.74□□□□□ -1.01
RNU1-56P-201ENST00000391303 SSC5DA1L4H1 1573 aa8.73□□□□□ -1.01
RNU1-56P-201ENST00000391303 SPDYE5A6NIY4 337 aa8.73□□□□□ -1.01
RNU1-56P-201ENST00000391303 TCP10L2B9ZVM9 353 aa8.73□□□□□ -1.01
RNU1-56P-201ENST00000391303 SRGAP3O43295 1099 aa8.73□□□□□ -1.01
RNU1-56P-201ENST00000391303 LDHBP07195 334 aaKnown RBP8.73□□□□□ -1.01
RNU1-56P-201ENST00000391303 GTF2A2P52657 109 aa8.73□□□□□ -1.01
RNU1-56P-201ENST00000391303 MLLT1Q03111 559 aaPredicted RBP8.73□□□□□ -1.01
RNU1-56P-201ENST00000391303 PRKG1Q13976 671 aa8.73□□□□□ -1.01
RNU1-56P-201ENST00000391303 ZKSCAN2Q63HK3 967 aa8.73□□□□□ -1.01
RNU1-56P-201ENST00000391303 FBXO46Q6PJ61 603 aaPredicted RBP8.73□□□□□ -1.01
RNU1-56P-201ENST00000391303 FAM151AQ8WW52 585 aa8.73□□□□□ -1.01
RNU1-56P-201ENST00000391303 IQSEC3Q9UPP2 1182 aaPredicted RBP8.73□□□□□ -1.01
RNU1-56P-201ENST00000391303 ENTPD3O75355 529 aa8.72□□□□□ -1.01
RNU1-56P-201ENST00000391303 NPM3O75607 178 aaKnown RBP8.72□□□□□ -1.01
RNU1-56P-201ENST00000391303 TBC1D8O95759 1140 aa8.72□□□□□ -1.01
RNU1-56P-201ENST00000391303 GRIK5Q16478 980 aa8.72□□□□□ -1.01
RNU1-56P-201ENST00000391303 CCDC102BQ68D86 513 aa8.72□□□□□ -1.01
RNU1-56P-201ENST00000391303 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.72□□□□□ -1.01
RNU1-56P-201ENST00000391303 ERO1BQ86YB8 467 aa8.72□□□□□ -1.01
RNU1-56P-201ENST00000391303 OPTNQ96CV9 577 aa8.72□□□□□ -1.01
RNU1-56P-201ENST00000391303 ERO1AQ96HE7 468 aa8.72□□□□□ -1.01
RNU1-56P-201ENST00000391303 CLMNQ96JQ2 1002 aa8.72□□□□□ -1.01
RNU1-56P-201ENST00000391303 MS4A4AQ96JQ5 239 aa8.72□□□□□ -1.01
RNU1-56P-201ENST00000391303 IDI2Q9BXS1 227 aa8.72□□□□□ -1.01
RNU1-56P-201ENST00000391303 TMEM39BQ9GZU3 492 aa8.72□□□□□ -1.01
RNU1-56P-201ENST00000391303 SIL1Q9H173 461 aa8.72□□□□□ -1.01
RNU1-56P-201ENST00000391303 GPR108Q9NPR9 543 aa8.72□□□□□ -1.01
RNU1-56P-201ENST00000391303 AOX1Q06278 1338 aa8.72□□□□□ -1.01
RNU1-56P-201ENST00000391303 A0A1B0GUL7 405 aa8.71□□□□□ -1.02
RNU1-56P-201ENST00000391303 CETPP11597 493 aa8.71□□□□□ -1.02
RNU1-56P-201ENST00000391303 MS4A1P11836 297 aa8.71□□□□□ -1.02
RNU1-56P-201ENST00000391303 PHKA1P46020 1223 aa8.71□□□□□ -1.02
RNU1-56P-201ENST00000391303 PPATQ06203 517 aa8.71□□□□□ -1.02
RNU1-56P-201ENST00000391303 VGLL4Q14135 290 aa8.71□□□□□ -1.02
RNU1-56P-201ENST00000391303 DIEXFQ68CQ4 756 aaKnown RBP8.71□□□□□ -1.02
RNU1-56P-201ENST00000391303 TMED8Q6PL24 325 aaPredicted RBP8.71□□□□□ -1.02
RNU1-56P-201ENST00000391303 ZNF341Q9BYN7 854 aa8.71□□□□□ -1.02
RNU1-56P-201ENST00000391303 ZNF112Q9UJU3 913 aa8.71□□□□□ -1.02
RNU1-56P-201ENST00000391303 DAGLAQ9Y4D2 1042 aa8.71□□□□□ -1.02
RNU1-56P-201ENST00000391303 GAKO14976 1311 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms