RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 RC3H2Q9HBD1 1191 aaKnown RBP3.89□□□□□ -1.79
RNU6-239P-201ENST00000390990 C1GALT1Q9NS00 363 aa3.89□□□□□ -1.79
RNU6-239P-201ENST00000390990 STIM2Q9P246 746 aa3.89□□□□□ -1.79
RNU6-239P-201ENST00000390990 NCANO14594 1321 aa3.89□□□□□ -1.79
RNU6-239P-201ENST00000390990 CD8BP10966 210 aa3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 ESRRAP11474 423 aaPredicted RBP3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 FUT4P22083 530 aa3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 CFPP27918 469 aa3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 CD96P40200 585 aa3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 GSTM4Q03013 218 aa3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 FAM69CQ0P6D2 419 aa3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 MAP7Q14244 749 aa3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 OGFOD3Q6PK18 319 aa3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 SEZ6L2Q6UXD5 910 aa3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 LCNL1Q6ZST4 164 aa3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 ATCAYQ86WG3 371 aa3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 C1QL4Q86Z23 238 aa3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 STK11IPQ8N1F8 1099 aa3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 CLUAP1Q96AJ1 413 aa3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 CALR3Q96L12 384 aaKnown RBP3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 ZKSCAN3Q9BRR0 538 aa3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 NRSN2Q9GZP1 204 aa3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 CHRDQ9H2X0 955 aa3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 SOX17Q9H6I2 414 aaPredicted RBP3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 FAM105AQ9NUU6 356 aa3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 NOVA2Q9UNW9 492 aaKnown RBP3.88□□□□□ -1.79
RNU6-239P-201ENST00000390990 A6NHS1 94 aa3.87□□□□□ -1.79
RNU6-239P-201ENST00000390990 CTSBP07858 339 aa3.87□□□□□ -1.79
RNU6-239P-201ENST00000390990 SWI5Q1ZZU3 235 aa3.87□□□□□ -1.79
RNU6-239P-201ENST00000390990 CFAP70Q5T0N1 1121 aa3.87□□□□□ -1.79
RNU6-239P-201ENST00000390990 XKR5Q6UX68 686 aa3.87□□□□□ -1.79
RNU6-239P-201ENST00000390990 LRRN4CLQ8ND94 238 aa3.87□□□□□ -1.79
RNU6-239P-201ENST00000390990 FAM84AQ96KN4 292 aa3.87□□□□□ -1.79
RNU6-239P-201ENST00000390990 OSMRQ99650 979 aa3.87□□□□□ -1.79
RNU6-239P-201ENST00000390990 GGNBP2Q9H3C7 697 aa3.87□□□□□ -1.79
RNU6-239P-201ENST00000390990 ACSS3Q9H6R3 686 aa3.87□□□□□ -1.79
RNU6-239P-201ENST00000390990 LGR6Q9HBX8 967 aa3.87□□□□□ -1.79
RNU6-239P-201ENST00000390990 ACIN1Q9UKV3 1341 aaKnown RBP3.87□□□□□ -1.79
RNU6-239P-201ENST00000390990 B8ZZF3 427 aa3.86□□□□□ -1.79
RNU6-239P-201ENST00000390990 RFX1P22670 979 aa3.86□□□□□ -1.79
RNU6-239P-201ENST00000390990 BUD31P41223 144 aaPredicted RBP3.86□□□□□ -1.79
RNU6-239P-201ENST00000390990 DYMQ7RTS9 669 aa3.86□□□□□ -1.79
RNU6-239P-201ENST00000390990 PROSER2Q86WR7 435 aaPredicted RBP3.86□□□□□ -1.79
RNU6-239P-201ENST00000390990 PLD6Q8N2A8 252 aaKnown RBP3.86□□□□□ -1.79
RNU6-239P-201ENST00000390990 ASAP3Q8TDY4 903 aa3.86□□□□□ -1.79
RNU6-239P-201ENST00000390990 U3KQE9 123 aa3.86□□□□□ -1.79
RNU6-239P-201ENST00000390990 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.85□□□□□ -1.79
RNU6-239P-201ENST00000390990 ZNF503-AS2A6NEH8 195 aa3.85□□□□□ -1.79
RNU6-239P-201ENST00000390990 LRRC10BA6NIK2 292 aa3.85□□□□□ -1.79
RNU6-239P-201ENST00000390990 AKAP4Q5JQC9 854 aa3.85□□□□□ -1.79
RNU6-239P-201ENST00000390990 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
RNU6-239P-201ENST00000390990 ABTB2Q8N961 1025 aa3.85□□□□□ -1.79
RNU6-239P-201ENST00000390990 FAM181AQ8N9Y4 354 aa3.85□□□□□ -1.79
RNU6-239P-201ENST00000390990 BHLHE22Q8NFJ8 381 aaPredicted RBP3.85□□□□□ -1.79
RNU6-239P-201ENST00000390990 PI4K2BQ8TCG2 481 aa3.85□□□□□ -1.79
RNU6-239P-201ENST00000390990 MISP3Q96FF7 219 aa3.85□□□□□ -1.79
RNU6-239P-201ENST00000390990 CXXC1Q9P0U4 656 aaPredicted RBP3.85□□□□□ -1.79
RNU6-239P-201ENST00000390990 ZMIZ1Q9ULJ6 1067 aa3.85□□□□□ -1.79
RNU6-239P-201ENST00000390990 METTL12A8MUP2 240 aa3.84□□□□□ -1.79
RNU6-239P-201ENST00000390990 EREGO14944 169 aa3.84□□□□□ -1.79
RNU6-239P-201ENST00000390990 MAOBP27338 520 aa3.84□□□□□ -1.79
RNU6-239P-201ENST00000390990 ASPAP45381 313 aa3.84□□□□□ -1.79
RNU6-239P-201ENST00000390990 RAP1GAPP47736 663 aa3.84□□□□□ -1.79
RNU6-239P-201ENST00000390990 NETO1Q8TDF5 533 aa3.84□□□□□ -1.79
RNU6-239P-201ENST00000390990 STK32AQ8WU08 396 aa3.84□□□□□ -1.79
RNU6-239P-201ENST00000390990 TOX2Q96NM4 488 aa3.84□□□□□ -1.79
RNU6-239P-201ENST00000390990 BHLHE41Q9C0J9 482 aaPredicted RBP3.84□□□□□ -1.79
RNU6-239P-201ENST00000390990 GSX1Q9H4S2 264 aaPredicted RBP3.84□□□□□ -1.79
RNU6-239P-201ENST00000390990 CRIM1Q9NZV1 1036 aa3.84□□□□□ -1.79
RNU6-239P-201ENST00000390990 VAV3Q9UKW4 847 aa3.84□□□□□ -1.79
RNU6-239P-201ENST00000390990 DAGLAQ9Y4D2 1042 aa3.84□□□□□ -1.79
RNU6-239P-201ENST00000390990 ECEL1O95672 775 aa3.83□□□□□ -1.8
RNU6-239P-201ENST00000390990 ZSCAN22P10073 491 aaPredicted RBP3.83□□□□□ -1.8
RNU6-239P-201ENST00000390990 PRKCQQ04759 706 aa3.83□□□□□ -1.8
RNU6-239P-201ENST00000390990 DNM1Q05193 864 aaKnown RBP3.83□□□□□ -1.8
RNU6-239P-201ENST00000390990 ECM1Q16610 540 aa3.83□□□□□ -1.8
RNU6-239P-201ENST00000390990 MLANAQ16655 118 aa3.83□□□□□ -1.8
RNU6-239P-201ENST00000390990 ZNF423Q2M1K9 1284 aa3.83□□□□□ -1.8
RNU6-239P-201ENST00000390990 C8orf34Q49A92 452 aa3.83□□□□□ -1.8
RNU6-239P-201ENST00000390990 TPRNQ4KMQ1 711 aa3.83□□□□□ -1.8
RNU6-239P-201ENST00000390990 PEAR1Q5VY43 1037 aaPredicted RBP3.83□□□□□ -1.8
RNU6-239P-201ENST00000390990 LRRC56Q8IYG6 542 aaPredicted RBP3.83□□□□□ -1.8
RNU6-239P-201ENST00000390990 EDEM1Q92611 657 aa3.83□□□□□ -1.8
RNU6-239P-201ENST00000390990 PMEPA1Q969W9 287 aa3.83□□□□□ -1.8
RNU6-239P-201ENST00000390990 LATS2Q9NRM7 1088 aa3.83□□□□□ -1.8
RNU6-239P-201ENST00000390990 LMCD1Q9NZU5 365 aa3.83□□□□□ -1.8
RNU6-239P-201ENST00000390990 SEPT3Q9UH03 358 aa3.83□□□□□ -1.8
RNU6-239P-201ENST00000390990 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.82□□□□□ -1.8
RNU6-239P-201ENST00000390990 TSPAN15O95858 294 aa3.82□□□□□ -1.8
RNU6-239P-201ENST00000390990 PDGFAP04085 211 aa3.82□□□□□ -1.8
RNU6-239P-201ENST00000390990 CDK5R2Q13319 367 aa3.82□□□□□ -1.8
RNU6-239P-201ENST00000390990 POU4F3Q15319 338 aa3.82□□□□□ -1.8
RNU6-239P-201ENST00000390990 CYP27C1Q4G0S4 372 aa3.82□□□□□ -1.8
RNU6-239P-201ENST00000390990 TTLL10Q6ZVT0 673 aa3.82□□□□□ -1.8
RNU6-239P-201ENST00000390990 SIAH1Q8IUQ4 282 aa3.82□□□□□ -1.8
RNU6-239P-201ENST00000390990 FLAD1Q8NFF5 587 aa3.82□□□□□ -1.8
RNU6-239P-201ENST00000390990 LIN37Q96GY3 246 aaPredicted RBP3.82□□□□□ -1.8
RNU6-239P-201ENST00000390990 PRDM7Q9NQW5 492 aa3.82□□□□□ -1.8
RNU6-239P-201ENST00000390990 RAD18Q9NS91 495 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms