RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 SALL1Q9NSC2 1324 aa14.11□□□□□ -0.15
IGHV4-28-201ENST00000390612 AOC2O75106 756 aa14.1□□□□□ -0.15
IGHV4-28-201ENST00000390612 G3BP1Q13283 466 aaKnown RBP eCLIP14.1□□□□□ -0.15
IGHV4-28-201ENST00000390612 PDE3AQ14432 1141 aa14.1□□□□□ -0.15
IGHV4-28-201ENST00000390612 RGMBQ6NW40 437 aa14.1□□□□□ -0.15
IGHV4-28-201ENST00000390612 CEP85Q6P2H3 762 aa14.1□□□□□ -0.15
IGHV4-28-201ENST00000390612 ZDHHC15Q96MV8 337 aa14.1□□□□□ -0.15
IGHV4-28-201ENST00000390612 GPR108Q9NPR9 543 aa14.1□□□□□ -0.15
IGHV4-28-201ENST00000390612 ZBTB40Q9NUA8 1239 aa14.1□□□□□ -0.15
IGHV4-28-201ENST00000390612 GNL3LQ9NVN8 582 aaKnown RBP14.1□□□□□ -0.15
IGHV4-28-201ENST00000390612 ZNF70Q9UC06 446 aaPredicted RBP14.1□□□□□ -0.15
IGHV4-28-201ENST00000390612 DENND2AQ9ULE3 1009 aa14.1□□□□□ -0.15
IGHV4-28-201ENST00000390612 PPP2R3BQ9Y5P8 575 aa14.1□□□□□ -0.15
IGHV4-28-201ENST00000390612 MYO5AQ9Y4I1 1855 aaKnown RBP14.1□□□□□ -0.15
IGHV4-28-201ENST00000390612 CLRN2A0PK11 232 aa14.09□□□□□ -0.15
IGHV4-28-201ENST00000390612 MYO1BO43795 1136 aa14.09□□□□□ -0.15
IGHV4-28-201ENST00000390612 MAP2K1Q02750 393 aaPredicted RBP14.09□□□□□ -0.15
IGHV4-28-201ENST00000390612 APOBEC3HQ6NTF7 200 aaKnown RBP14.09□□□□□ -0.15
IGHV4-28-201ENST00000390612 HHIPL2Q6UWX4 724 aa14.09□□□□□ -0.15
IGHV4-28-201ENST00000390612 LAMB1P07942 1786 aa14.09□□□□□ -0.15
IGHV4-28-201ENST00000390612 SSC5DA1L4H1 1573 aa14.09□□□□□ -0.15
IGHV4-28-201ENST00000390612 FOXN1O15353 648 aa14.08□□□□□ -0.16
IGHV4-28-201ENST00000390612 RBM5P52756 815 aaKnown RBP eCLIP14.08□□□□□ -0.16
IGHV4-28-201ENST00000390612 NOGQ13253 232 aa14.08□□□□□ -0.16
IGHV4-28-201ENST00000390612 RASGRF1Q13972 1273 aa14.08□□□□□ -0.16
IGHV4-28-201ENST00000390612 LDLRAD1Q5T700 205 aa14.08□□□□□ -0.16
IGHV4-28-201ENST00000390612 MOB2Q70IA6 237 aa14.08□□□□□ -0.16
IGHV4-28-201ENST00000390612 TEKT1Q969V4 418 aa14.08□□□□□ -0.16
IGHV4-28-201ENST00000390612 CCDC102AQ96A19 550 aa14.08□□□□□ -0.16
IGHV4-28-201ENST00000390612 ZIC5Q96T25 663 aa14.08□□□□□ -0.16
IGHV4-28-201ENST00000390612 TDRD3Q9H7E2 651 aaKnown RBP14.08□□□□□ -0.16
IGHV4-28-201ENST00000390612 DDX19BQ9UMR2 479 aa14.08□□□□□ -0.16
IGHV4-28-201ENST00000390612 COG6Q9Y2V7 657 aa14.08□□□□□ -0.16
IGHV4-28-201ENST00000390612 MAST3O60307 1309 aa14.08□□□□□ -0.16
IGHV4-28-201ENST00000390612 UBE2Q2LH0YL09 131 aa14.07□□□□□ -0.16
IGHV4-28-201ENST00000390612 SURF6O75683 361 aaKnown RBP14.07□□□□□ -0.16
IGHV4-28-201ENST00000390612 SLC10A3P09131 477 aa14.07□□□□□ -0.16
IGHV4-28-201ENST00000390612 ARID4AP29374 1257 aaPredicted RBP14.07□□□□□ -0.16
IGHV4-28-201ENST00000390612 PRDX5P30044 214 aa14.07□□□□□ -0.16
IGHV4-28-201ENST00000390612 RASA3Q14644 834 aa14.07□□□□□ -0.16
IGHV4-28-201ENST00000390612 MAP3K11Q16584 847 aa14.07□□□□□ -0.16
IGHV4-28-201ENST00000390612 C20orf194Q5TEA3 1177 aa14.07□□□□□ -0.16
IGHV4-28-201ENST00000390612 FKBP1CQ5VVH2 108 aa14.07□□□□□ -0.16
IGHV4-28-201ENST00000390612 PAXIP1Q6ZW49 1069 aaPredicted RBP14.07□□□□□ -0.16
IGHV4-28-201ENST00000390612 SIRT2Q8IXJ6 389 aa14.07□□□□□ -0.16
IGHV4-28-201ENST00000390612 TEPSINQ96N21 525 aa14.07□□□□□ -0.16
IGHV4-28-201ENST00000390612 AK9Q5TCS8 1911 aa14.07□□□□□ -0.16
IGHV4-28-201ENST00000390612 CASP8AP2Q9UKL3 1982 aa14.06□□□□□ -0.16
IGHV4-28-201ENST00000390612 ZNF157P51786 506 aaPredicted RBP14.06□□□□□ -0.16
IGHV4-28-201ENST00000390612 TNNI3KQ59H18 835 aa14.06□□□□□ -0.16
IGHV4-28-201ENST00000390612 NBPF12Q5TAG4 269 aaPredicted RBP14.06□□□□□ -0.16
IGHV4-28-201ENST00000390612 RPAP2Q8IXW5 612 aaPredicted RBP14.06□□□□□ -0.16
IGHV4-28-201ENST00000390612 NEUROD6Q96NK8 337 aa14.06□□□□□ -0.16
IGHV4-28-201ENST00000390612 VEZTQ9HBM0 779 aa14.06□□□□□ -0.16
IGHV4-28-201ENST00000390612 FPGT-TNNI3KV9GXZ4 949 aa14.06□□□□□ -0.16
IGHV4-28-201ENST00000390612 OTOFQ9HC10 1997 aa14.05□□□□□ -0.16
IGHV4-28-201ENST00000390612 LDHBP07195 334 aaKnown RBP14.05□□□□□ -0.16
IGHV4-28-201ENST00000390612 NF2P35240 595 aa14.05□□□□□ -0.16
IGHV4-28-201ENST00000390612 GRM1Q13255 1194 aa14.05□□□□□ -0.16
IGHV4-28-201ENST00000390612 TNFAIP1Q13829 316 aa14.05□□□□□ -0.16
IGHV4-28-201ENST00000390612 SUPT20HL1Q3ZLR7 823 aa14.05□□□□□ -0.16
IGHV4-28-201ENST00000390612 COL13A1Q5TAT6 717 aaPredicted RBP14.05□□□□□ -0.16
IGHV4-28-201ENST00000390612 RASAL3Q86YV0 1011 aa14.05□□□□□ -0.16
IGHV4-28-201ENST00000390612 FAM163AQ96GL9 167 aaPredicted RBP14.05□□□□□ -0.16
IGHV4-28-201ENST00000390612 HMG20BQ9P0W2 317 aa14.05□□□□□ -0.16
IGHV4-28-201ENST00000390612 DAGLAQ9Y4D2 1042 aa14.05□□□□□ -0.16
IGHV4-28-201ENST00000390612 UNCXA6NJT0 531 aa14.04□□□□□ -0.16
IGHV4-28-201ENST00000390612 HSPA8P11142 646 aaKnown RBP14.04□□□□□ -0.16
IGHV4-28-201ENST00000390612 CTCFP49711 727 aaPredicted RBP14.04□□□□□ -0.16
IGHV4-28-201ENST00000390612 DIXDC1Q155Q3 683 aa14.04□□□□□ -0.16
IGHV4-28-201ENST00000390612 ARMC9Q7Z3E5 817 aa14.04□□□□□ -0.16
IGHV4-28-201ENST00000390612 FAM83AQ86UY5 434 aa14.04□□□□□ -0.16
IGHV4-28-201ENST00000390612 ZGPATQ8N5A5 531 aaKnown RBP14.04□□□□□ -0.16
IGHV4-28-201ENST00000390612 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.04□□□□□ -0.16
IGHV4-28-201ENST00000390612 ZNF384Q8TF68 577 aa14.04□□□□□ -0.16
IGHV4-28-201ENST00000390612 ZNF512BQ96KM6 892 aaPredicted RBP14.04□□□□□ -0.16
IGHV4-28-201ENST00000390612 PRDM10Q9NQV6 1147 aa14.04□□□□□ -0.16
IGHV4-28-201ENST00000390612 GAKO14976 1311 aa14.04□□□□□ -0.16
IGHV4-28-201ENST00000390612 USP2O75604 605 aaPredicted RBP14.03□□□□□ -0.16
IGHV4-28-201ENST00000390612 MCAMP43121 646 aa14.03□□□□□ -0.16
IGHV4-28-201ENST00000390612 KIF23Q02241 960 aaPredicted RBP14.03□□□□□ -0.16
IGHV4-28-201ENST00000390612 CDAN1Q8IWY9 1227 aa14.03□□□□□ -0.16
IGHV4-28-201ENST00000390612 SPATA5Q8NB90 893 aa14.03□□□□□ -0.16
IGHV4-28-201ENST00000390612 AIDAQ96BJ3 306 aa14.03□□□□□ -0.16
IGHV4-28-201ENST00000390612 EAF2Q96CJ1 260 aaPredicted RBP14.03□□□□□ -0.16
IGHV4-28-201ENST00000390612 DBNDD2Q9BQY9 259 aa14.03□□□□□ -0.16
IGHV4-28-201ENST00000390612 CHMP4BQ9H444 224 aaKnown RBP14.03□□□□□ -0.16
IGHV4-28-201ENST00000390612 TCP10L2B9ZVM9 353 aa14.02□□□□□ -0.17
IGHV4-28-201ENST00000390612 CA12O43570 354 aa14.02□□□□□ -0.17
IGHV4-28-201ENST00000390612 UQCRFS1P1P0C7P4 283 aa14.02□□□□□ -0.17
IGHV4-28-201ENST00000390612 CACNB3P54284 484 aa14.02□□□□□ -0.17
IGHV4-28-201ENST00000390612 OS9Q13438 667 aaPredicted RBP14.02□□□□□ -0.17
IGHV4-28-201ENST00000390612 SPTY2D1Q68D10 685 aaPredicted RBP14.02□□□□□ -0.17
IGHV4-28-201ENST00000390612 CDC42EP5Q6NZY7 148 aa14.02□□□□□ -0.17
IGHV4-28-201ENST00000390612 PI16Q6UXB8 463 aa14.02□□□□□ -0.17
IGHV4-28-201ENST00000390612 CSRNP1Q96S65 589 aa14.02□□□□□ -0.17
IGHV4-28-201ENST00000390612 TMEM39BQ9GZU3 492 aa14.02□□□□□ -0.17
IGHV4-28-201ENST00000390612 DBNLQ9UJU6 430 aaKnown RBP14.02□□□□□ -0.17
IGHV4-28-201ENST00000390612 ANGEL1Q9UNK9 670 aaKnown RBP14.02□□□□□ -0.17
IGHV4-28-201ENST00000390612 FZD1Q9UP38 647 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms