RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 RAB6BQ9NRW1 208 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 KCNH4Q9UQ05 1017 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 DMRT1Q9Y5R6 373 aa0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 ZC3H4Q9UPT8 1303 aaKnown RBP0.1□□□□□ -2.39
TRAJ28-201ENST00000390509 FBN3Q75N90 2809 aa0.09□□□□□ -2.39
TRAJ28-201ENST00000390509 MYOCOSA0A1B0GUC4 107 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 NUTM2FA1L443 756 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 A6NHS1 94 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 TRIM38O00635 465 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 IRS4O14654 1257 aaPredicted RBP0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 MUSKO15146 869 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 NARSO43776 548 aaKnown RBP0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 RAMP2O60895 175 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 MAP3K6O95382 1288 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 CEACAM5P06731 702 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 ADH4P08319 380 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF37AP17032 561 aaPredicted RBP0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 EIF2AK2P19525 551 aaKnown RBP0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 ARID4AP29374 1257 aaPredicted RBP0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 KCNQ4P56696 695 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 HILS1P60008 231 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 GPLD1P80108 840 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 SSBP2P81877 361 aaPredicted RBP0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 DAB2P98082 770 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 PLAURQ03405 335 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 TROAPQ12815 778 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 SFSWAPQ12872 951 aaKnown RBP0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 FOXE3Q13461 319 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 FHL3Q13643 280 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 MAP7Q14244 749 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 TLR1Q15399 786 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 VMACQ2NL98 169 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 MIIPQ5JXC2 388 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 ATXN7L2Q5T6C5 722 aaPredicted RBP0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 NT5DC1Q5TFE4 455 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 RUSC1-AS1Q66K80 236 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 PPP2R2DQ66LE6 453 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 PDXDC2PQ6P474 469 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 CNKSR3Q6P9H4 555 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 PCSK4Q6UW60 755 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 GLB1LQ6UWU2 654 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 GSG1LQ6UXU4 331 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 DLK2Q6UY11 383 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 LRRC69Q6ZNQ3 347 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 BICDL1Q6ZP65 573 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 DZIP3Q86Y13 1208 aaKnown RBP0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 NUTM1Q86Y26 1132 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 PALM2Q8IXS6 379 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 IL22RA1Q8N6P7 574 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 FAM181AQ8N9Y4 354 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 TP53I13Q8NBR0 393 aaPredicted RBP0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 GALNT11Q8NCW6 608 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 PIWIL2Q8TC59 973 aaKnown RBP0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 UBASH3BQ8TF42 649 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 FBLIM1Q8WUP2 373 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 NEU4Q8WWR8 484 aaPredicted RBP0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 NLRP7Q8WX94 980 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 DDX1Q92499 740 aaKnown RBP0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 EZH1Q92800 747 aaPredicted RBP0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 AIDAQ96BJ3 306 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 PNMA5Q96PV4 448 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 SGPP1Q9BX95 441 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 LNPKQ9C0E8 428 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 SMG9Q9H0W8 520 aaKnown RBP0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 DNAJC5Q9H3Z4 198 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF768Q9H5H4 540 aaKnown RBP0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 NEUROD4Q9HD90 331 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 C19orf73Q9NVV2 129 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 KCNK4Q9NYG8 393 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 WWOXQ9NZC7 414 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 ST6GALNAC2Q9UJ37 374 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF580Q9UK33 172 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 ADAM29Q9UKF5 820 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 PCDHGC3Q9UN70 934 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 TCAF1Q9Y4C2 921 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 ARIH1Q9Y4X5 557 aaPredicted RBP0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 GTF3C5Q9Y5Q8 519 aaPredicted RBP0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 SNX11Q9Y5W9 270 aa0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 GPC6Q9Y625 555 aaPredicted RBP0.09□□□□□ -2.4
TRAJ28-201ENST00000390509 FAM177BA6PVY3 158 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 CFAP99D6REC4 459 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 RBAK-RBAKDNI3L0D1 243 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 HRKO00198 91 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 FFAR3O14843 346 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 N4BP3O15049 544 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 TRAK2O60296 914 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 TIAF1O95411 115 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 NUDT3O95989 172 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 ITIH2P19823 946 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 NFKB1P19838 968 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 RAB6AP20340 208 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 ADRA1BP35368 520 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 PDE6BP35913 854 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 CAP1Q01518 475 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 PTH1RQ03431 593 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 PTK2Q05397 1052 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 TYRO3Q06418 890 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 HYAL1Q12794 435 aa0.08□□□□□ -2.4
TRAJ28-201ENST00000390509 HIC1Q14526 733 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms