RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 NOS2P35228 1153 aa3.3□□□□□ -1.88
TRAV41-201ENST00000390468 RAC1P63000 192 aa3.3□□□□□ -1.88
TRAV41-201ENST00000390468 SETQ01105 290 aaPredicted RBP3.3□□□□□ -1.88
TRAV41-201ENST00000390468 COL9A3Q14050 684 aaPredicted RBP3.3□□□□□ -1.88
TRAV41-201ENST00000390468 MBTPS1Q14703 1052 aa3.3□□□□□ -1.88
TRAV41-201ENST00000390468 MTFR1Q15390 333 aa3.3□□□□□ -1.88
TRAV41-201ENST00000390468 CC2D1BQ5T0F9 858 aaKnown RBP3.3□□□□□ -1.88
TRAV41-201ENST00000390468 TMEM132EQ6IEE7 984 aa3.3□□□□□ -1.88
TRAV41-201ENST00000390468 FRAT1Q92837 279 aaPredicted RBP3.3□□□□□ -1.88
TRAV41-201ENST00000390468 SLC4A9Q96Q91 983 aa3.3□□□□□ -1.88
TRAV41-201ENST00000390468 GTPBP4Q9BZE4 634 aaKnown RBP3.3□□□□□ -1.88
TRAV41-201ENST00000390468 SCHIP1Q9P0W5 487 aaPredicted RBP3.3□□□□□ -1.88
TRAV41-201ENST00000390468 SERPINA10Q9UK55 444 aa3.3□□□□□ -1.88
TRAV41-201ENST00000390468 NOD1Q9Y239 953 aa3.3□□□□□ -1.88
TRAV41-201ENST00000390468 PCDHGA11Q9Y5H2 935 aa3.3□□□□□ -1.88
TRAV41-201ENST00000390468 EID1Q9Y6B2 187 aa3.3□□□□□ -1.88
TRAV41-201ENST00000390468 MARF1Q9Y4F3 1742 aaKnown RBP3.3□□□□□ -1.88
TRAV41-201ENST00000390468 KIF1AQ12756 1690 aa3.3□□□□□ -1.88
TRAV41-201ENST00000390468 SHPRHQ149N8 1683 aa3.3□□□□□ -1.88
TRAV41-201ENST00000390468 KAT6BQ8WYB5 2073 aa3.29□□□□□ -1.88
TRAV41-201ENST00000390468 ADAMTS13Q76LX8 1427 aa3.29□□□□□ -1.88
TRAV41-201ENST00000390468 CACNA1FO60840 1977 aa3.29□□□□□ -1.88
TRAV41-201ENST00000390468 A0A0A0MRY4 1105 aa3.29□□□□□ -1.88
TRAV41-201ENST00000390468 ADARB2-AS1A8MUL3 147 aa3.29□□□□□ -1.88
TRAV41-201ENST00000390468 HYAL3O43820 417 aaPredicted RBP3.29□□□□□ -1.88
TRAV41-201ENST00000390468 SELPP16109 830 aa3.29□□□□□ -1.88
TRAV41-201ENST00000390468 TERF1P54274 439 aa3.29□□□□□ -1.88
TRAV41-201ENST00000390468 DMTNQ08495 405 aa3.29□□□□□ -1.88
TRAV41-201ENST00000390468 NCOA4Q13772 614 aa3.29□□□□□ -1.88
TRAV41-201ENST00000390468 LRP8Q14114 963 aa3.29□□□□□ -1.88
TRAV41-201ENST00000390468 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.29□□□□□ -1.88
TRAV41-201ENST00000390468 TXNRD3Q86VQ6 643 aa3.29□□□□□ -1.88
TRAV41-201ENST00000390468 DMRTC2Q8IXT2 367 aaPredicted RBP3.29□□□□□ -1.88
TRAV41-201ENST00000390468 THEMISQ8N1K5 641 aaPredicted RBP3.29□□□□□ -1.88
TRAV41-201ENST00000390468 ZNF280CQ8ND82 737 aa3.29□□□□□ -1.88
TRAV41-201ENST00000390468 NGLY1Q96IV0 654 aa3.29□□□□□ -1.88
TRAV41-201ENST00000390468 TESK2Q96S53 571 aa3.29□□□□□ -1.88
TRAV41-201ENST00000390468 PSMD1Q99460 953 aa3.29□□□□□ -1.88
TRAV41-201ENST00000390468 DNAJC2Q99543 621 aaKnown RBP3.29□□□□□ -1.88
TRAV41-201ENST00000390468 TSPYL1Q9H0U9 437 aa3.29□□□□□ -1.88
TRAV41-201ENST00000390468 POGKQ9P215 609 aa3.29□□□□□ -1.88
TRAV41-201ENST00000390468 RGPD2P0DJD1 1756 aa3.29□□□□□ -1.88
TRAV41-201ENST00000390468 USP54Q70EL1 1684 aa3.29□□□□□ -1.88
TRAV41-201ENST00000390468 CDC42BPGQ6DT37 1551 aa3.29□□□□□ -1.88
TRAV41-201ENST00000390468 TECPR2O15040 1411 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 PTCH1Q13635 1447 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 LRPPRCP42704 1394 aaKnown RBP3.28□□□□□ -1.88
TRAV41-201ENST00000390468 KTN1Q86UP2 1357 aaKnown RBP3.28□□□□□ -1.88
TRAV41-201ENST00000390468 EVC2Q86UK5 1308 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 EML1O00423 815 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 TCERG1O14776 1098 aaKnown RBP3.28□□□□□ -1.88
TRAV41-201ENST00000390468 ELNP15502 786 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 IRX6P78412 446 aaPredicted RBP3.28□□□□□ -1.88
TRAV41-201ENST00000390468 NRG1Q02297 640 aaPredicted RBP3.28□□□□□ -1.88
TRAV41-201ENST00000390468 SAFB2Q14151 953 aaKnown RBP eCLIP3.28□□□□□ -1.88
TRAV41-201ENST00000390468 ADGRE1Q14246 886 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 TEAD4Q15561 434 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 WASHC4Q2M389 1173 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 TXNDC2Q86VQ3 553 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 FNBP4Q8N3X1 1017 aaPredicted RBP3.28□□□□□ -1.88
TRAV41-201ENST00000390468 CEP120Q8N960 986 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 RGS22Q8NE09 1264 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 TPCN2Q8NHX9 752 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 TNFRSF25Q93038 417 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 POM121Q96HA1 1249 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 PNMA5Q96PV4 448 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 PHACTR1Q9C0D0 580 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 TSPAN10Q9H1Z9 355 aaPredicted RBP3.28□□□□□ -1.88
TRAV41-201ENST00000390468 STK26Q9P289 416 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 SLC6A14Q9UN76 642 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 KCNH4Q9UQ05 1017 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 HDAC5Q9UQL6 1122 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 CHMP3Q9Y3E7 222 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 MED14O60244 1454 aa3.28□□□□□ -1.88
TRAV41-201ENST00000390468 NPHP4O75161 1426 aaPredicted RBP3.27□□□□□ -1.89
TRAV41-201ENST00000390468 FAM135BQ49AJ0 1406 aa3.27□□□□□ -1.89
TRAV41-201ENST00000390468 METP08581 1390 aa3.27□□□□□ -1.89
TRAV41-201ENST00000390468 ATAD2Q6PL18 1390 aa3.27□□□□□ -1.89
TRAV41-201ENST00000390468 PIK3R4Q99570 1358 aa3.27□□□□□ -1.89
TRAV41-201ENST00000390468 NINLQ9Y2I6 1382 aa3.27□□□□□ -1.89
TRAV41-201ENST00000390468 PIK3C2AO00443 1686 aa3.27□□□□□ -1.89
TRAV41-201ENST00000390468 LTKP29376 864 aa3.27□□□□□ -1.89
TRAV41-201ENST00000390468 SRPK2P78362 688 aaKnown RBP3.27□□□□□ -1.89
TRAV41-201ENST00000390468 SLC20A2Q08357 652 aa3.27□□□□□ -1.89
TRAV41-201ENST00000390468 NFKBIBQ15653 356 aa3.27□□□□□ -1.89
TRAV41-201ENST00000390468 PSAPL1Q6NUJ1 521 aa3.27□□□□□ -1.89
TRAV41-201ENST00000390468 C20orf204Q6ZNR8 217 aa3.27□□□□□ -1.89
TRAV41-201ENST00000390468 TMC1Q8TDI8 760 aa3.27□□□□□ -1.89
TRAV41-201ENST00000390468 PRAM1Q96QH2 718 aa3.27□□□□□ -1.89
TRAV41-201ENST00000390468 MDFIQ99750 246 aa3.27□□□□□ -1.89
TRAV41-201ENST00000390468 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
TRAV41-201ENST00000390468 PRKRIP1Q9H875 184 aaPredicted RBP3.27□□□□□ -1.89
TRAV41-201ENST00000390468 PRDM6Q9NQX0 595 aa3.27□□□□□ -1.89
TRAV41-201ENST00000390468 ZHX1Q9UKY1 873 aaPredicted RBP3.27□□□□□ -1.89
TRAV41-201ENST00000390468 ISY1Q9ULR0 285 aaKnown RBP3.27□□□□□ -1.89
TRAV41-201ENST00000390468 COG6Q9Y2V7 657 aa3.27□□□□□ -1.89
TRAV41-201ENST00000390468 KNSTRNQ9Y448 316 aa3.27□□□□□ -1.89
TRAV41-201ENST00000390468 ATP7BP35670 1465 aa3.27□□□□□ -1.89
TRAV41-201ENST00000390468 TRPM3Q9HCF6 1732 aaPredicted RBP3.27□□□□□ -1.89
TRAV41-201ENST00000390468 NSD3Q9BZ95 1437 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms