RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 FSHRP23945 695 aa9.3□□□□□ -0.92
TRBV28-201ENST00000390400 TERF1P54274 439 aa9.3□□□□□ -0.92
TRBV28-201ENST00000390400 GDF10P55107 478 aa9.3□□□□□ -0.92
TRBV28-201ENST00000390400 WNT7BP56706 349 aa9.3□□□□□ -0.92
TRBV28-201ENST00000390400 SLFN5Q08AF3 891 aa9.3□□□□□ -0.92
TRBV28-201ENST00000390400 BECN1Q14457 450 aa9.3□□□□□ -0.92
TRBV28-201ENST00000390400 TBCELQ5QJ74 424 aa9.3□□□□□ -0.92
TRBV28-201ENST00000390400 RC3H1Q5TC82 1133 aaKnown RBP9.3□□□□□ -0.92
TRBV28-201ENST00000390400 CC2D2BQ6DHV5 1058 aa9.3□□□□□ -0.92
TRBV28-201ENST00000390400 PPP1R18Q6NYC8 613 aa9.3□□□□□ -0.92
TRBV28-201ENST00000390400 LIAT1Q6ZQX7 453 aa9.3□□□□□ -0.92
TRBV28-201ENST00000390400 SCG3Q8WXD2 468 aaKnown RBP9.3□□□□□ -0.92
TRBV28-201ENST00000390400 PIGBQ92521 554 aa9.3□□□□□ -0.92
TRBV28-201ENST00000390400 MRRFQ96E11 262 aaKnown RBP9.3□□□□□ -0.92
TRBV28-201ENST00000390400 TSPAN10Q9H1Z9 355 aaPredicted RBP9.3□□□□□ -0.92
TRBV28-201ENST00000390400 MBIPQ9NS73 344 aa9.3□□□□□ -0.92
TRBV28-201ENST00000390400 SERTAD1Q9UHV2 236 aa9.3□□□□□ -0.92
TRBV28-201ENST00000390400 USP3Q9Y6I4 520 aa9.3□□□□□ -0.92
TRBV28-201ENST00000390400 KDM3BQ7LBC6 1761 aa9.29□□□□□ -0.92
TRBV28-201ENST00000390400 A0A1W2PRU2 124 aa9.29□□□□□ -0.92
TRBV28-201ENST00000390400 PTMSP20962 102 aa9.29□□□□□ -0.92
TRBV28-201ENST00000390400 FKBP4Q02790 459 aaKnown RBP eCLIP9.29□□□□□ -0.92
TRBV28-201ENST00000390400 KCNC4Q03721 635 aa9.29□□□□□ -0.92
TRBV28-201ENST00000390400 FBXO33Q7Z6M2 555 aa9.29□□□□□ -0.92
TRBV28-201ENST00000390400 GLYCTKQ8IVS8 523 aa9.29□□□□□ -0.92
TRBV28-201ENST00000390400 TTC5Q8N0Z6 440 aa9.29□□□□□ -0.92
TRBV28-201ENST00000390400 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.29□□□□□ -0.92
TRBV28-201ENST00000390400 GIPC2Q8TF65 315 aa9.29□□□□□ -0.92
TRBV28-201ENST00000390400 FRAT1Q92837 279 aaPredicted RBP9.29□□□□□ -0.92
TRBV28-201ENST00000390400 TSR2Q969E8 191 aaKnown RBP9.29□□□□□ -0.92
TRBV28-201ENST00000390400 BCL2L13Q9BXK5 485 aa9.29□□□□□ -0.92
TRBV28-201ENST00000390400 MIS18AQ9NYP9 233 aa9.29□□□□□ -0.92
TRBV28-201ENST00000390400 BTAF1O14981 1849 aa9.28□□□□□ -0.92
TRBV28-201ENST00000390400 PAPPAQ13219 1627 aa9.28□□□□□ -0.92
TRBV28-201ENST00000390400 KCNQ2O43526 872 aa9.28□□□□□ -0.92
TRBV28-201ENST00000390400 TPM2P07951 284 aa9.28□□□□□ -0.92
TRBV28-201ENST00000390400 NR3C2P08235 984 aa9.28□□□□□ -0.92
TRBV28-201ENST00000390400 IGFBP4P22692 258 aa9.28□□□□□ -0.92
TRBV28-201ENST00000390400 SLC39A6Q13433 755 aa9.28□□□□□ -0.92
TRBV28-201ENST00000390400 MAP7D2Q96T17 732 aa9.28□□□□□ -0.92
TRBV28-201ENST00000390400 BRPF3Q9ULD4 1205 aa9.28□□□□□ -0.92
TRBV28-201ENST00000390400 KDM2BQ8NHM5 1336 aa9.28□□□□□ -0.92
TRBV28-201ENST00000390400 KCNQ3O43525 872 aa9.27□□□□□ -0.93
TRBV28-201ENST00000390400 TRIM37O94972 964 aa9.27□□□□□ -0.93
TRBV28-201ENST00000390400 INHAP05111 366 aa9.27□□□□□ -0.93
TRBV28-201ENST00000390400 ERCC3P19447 782 aa9.27□□□□□ -0.93
TRBV28-201ENST00000390400 FAM26DQ5JW98 314 aa9.27□□□□□ -0.93
TRBV28-201ENST00000390400 DUSP27Q5VZP5 1158 aa9.27□□□□□ -0.93
TRBV28-201ENST00000390400 ZNF790Q6PG37 636 aa9.27□□□□□ -0.93
TRBV28-201ENST00000390400 CCDC125Q86Z20 511 aa9.27□□□□□ -0.93
TRBV28-201ENST00000390400 TRMT2AQ8IZ69 625 aaKnown RBP9.27□□□□□ -0.93
TRBV28-201ENST00000390400 EHBP1Q8NDI1 1231 aa9.27□□□□□ -0.93
TRBV28-201ENST00000390400 SMARCC1Q92922 1105 aaPredicted RBP9.27□□□□□ -0.93
TRBV28-201ENST00000390400 ATG3Q9NT62 314 aa9.27□□□□□ -0.93
TRBV28-201ENST00000390400 ASAP1Q9ULH1 1129 aa9.27□□□□□ -0.93
TRBV28-201ENST00000390400 UBR2Q8IWV8 1755 aa9.27□□□□□ -0.93
TRBV28-201ENST00000390400 FOXK2Q01167 660 aa9.26□□□□□ -0.93
TRBV28-201ENST00000390400 HSP90AA2PQ14568 343 aaPredicted RBP9.26□□□□□ -0.93
TRBV28-201ENST00000390400 PPP1R26Q5T8A7 1209 aaPredicted RBP9.26□□□□□ -0.93
TRBV28-201ENST00000390400 POTEGQ6S5H5 508 aa9.26□□□□□ -0.93
TRBV28-201ENST00000390400 PTF1AQ7RTS3 328 aa9.26□□□□□ -0.93
TRBV28-201ENST00000390400 FMNL2Q96PY5 1086 aa9.26□□□□□ -0.93
TRBV28-201ENST00000390400 KCPQ6ZWJ8 1503 aa9.26□□□□□ -0.93
TRBV28-201ENST00000390400 PALLDQ8WX93 1383 aa9.25□□□□□ -0.93
TRBV28-201ENST00000390400 HSP90AA1P07900 732 aaKnown RBP9.25□□□□□ -0.93
TRBV28-201ENST00000390400 NPR3P17342 541 aa9.25□□□□□ -0.93
TRBV28-201ENST00000390400 MAPK1P28482 360 aa9.25□□□□□ -0.93
TRBV28-201ENST00000390400 RPIAP49247 311 aa9.25□□□□□ -0.93
TRBV28-201ENST00000390400 EIF4A1P60842 406 aaKnown RBP9.25□□□□□ -0.93
TRBV28-201ENST00000390400 MTERF4Q7Z6M4 381 aaKnown RBP9.25□□□□□ -0.93
TRBV28-201ENST00000390400 KDF1Q8NAX2 398 aaPredicted RBP9.25□□□□□ -0.93
TRBV28-201ENST00000390400 HELQQ8TDG4 1101 aa9.25□□□□□ -0.93
TRBV28-201ENST00000390400 ZNF496Q96IT1 587 aaPredicted RBP9.25□□□□□ -0.93
TRBV28-201ENST00000390400 ASB16Q96NS5 453 aa9.25□□□□□ -0.93
TRBV28-201ENST00000390400 SLC4A9Q96Q91 983 aa9.25□□□□□ -0.93
TRBV28-201ENST00000390400 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.25□□□□□ -0.93
TRBV28-201ENST00000390400 RAB6BQ9NRW1 208 aa9.25□□□□□ -0.93
TRBV28-201ENST00000390400 PTCD1O75127 700 aaKnown RBP9.24□□□□□ -0.93
TRBV28-201ENST00000390400 EXOSC9Q06265 439 aaKnown RBP9.24□□□□□ -0.93
TRBV28-201ENST00000390400 COL26A1Q96A83 441 aa9.24□□□□□ -0.93
TRBV28-201ENST00000390400 DCTN4Q9UJW0 460 aa9.24□□□□□ -0.93
TRBV28-201ENST00000390400 TNS1Q9HBL0 1735 aaKnown RBP9.24□□□□□ -0.93
TRBV28-201ENST00000390400 SOS1Q07889 1333 aaPredicted RBP9.24□□□□□ -0.93
TRBV28-201ENST00000390400 EP400Q96L91 3159 aa9.24□□□□□ -0.93
TRBV28-201ENST00000390400 HEG1Q9ULI3 1381 aa9.24□□□□□ -0.93
TRBV28-201ENST00000390400 LOC102724428A0A0B4J2F2 783 aa9.23□□□□□ -0.93
TRBV28-201ENST00000390400 ELL2O00472 640 aaPredicted RBP9.23□□□□□ -0.93
TRBV28-201ENST00000390400 TNFRSF10BO14763 440 aa9.23□□□□□ -0.93
TRBV28-201ENST00000390400 IL2RAP01589 272 aa9.23□□□□□ -0.93
TRBV28-201ENST00000390400 HOXB7P09629 217 aa9.23□□□□□ -0.93
TRBV28-201ENST00000390400 SNRPA1P09661 255 aaKnown RBP9.23□□□□□ -0.93
TRBV28-201ENST00000390400 MPSTP25325 297 aa9.23□□□□□ -0.93
TRBV28-201ENST00000390400 SIK1P57059 783 aa9.23□□□□□ -0.93
TRBV28-201ENST00000390400 SF3B2Q13435 895 aaKnown RBP9.23□□□□□ -0.93
TRBV28-201ENST00000390400 KRT24Q2M2I5 525 aa9.23□□□□□ -0.93
TRBV28-201ENST00000390400 TWISTNBQ3B726 338 aaPredicted RBP9.23□□□□□ -0.93
TRBV28-201ENST00000390400 C8orf58Q8NAV2 365 aa9.23□□□□□ -0.93
TRBV28-201ENST00000390400 C5P01031 1676 aa9.23□□□□□ -0.93
TRBV28-201ENST00000390400 LY75O60449 1722 aa9.22□□□□□ -0.93
TRBV28-201ENST00000390400 LAMB4A4D0S4 1761 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms