RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 MARCKSP29966 332 aaPredicted RBP11.72□□□□□ -0.53
PKP4-201ENST00000389757 ASIC1P78348 528 aa11.72□□□□□ -0.53
PKP4-201ENST00000389757 MFSD14BQ5SR56 506 aa11.72□□□□□ -0.53
PKP4-201ENST00000389757 ISM2Q6H9L7 571 aa11.72□□□□□ -0.53
PKP4-201ENST00000389757 KIF1BO60333 1816 aa11.72□□□□□ -0.53
PKP4-201ENST00000389757 USO1O60763 962 aaKnown RBP11.72□□□□□ -0.53
PKP4-201ENST00000389757 OTUD7AQ8TE49 926 aaPredicted RBP11.72□□□□□ -0.53
PKP4-201ENST00000389757 FERMT2Q96AC1 680 aa11.72□□□□□ -0.53
PKP4-201ENST00000389757 BIN2Q9UBW5 565 aaPredicted RBP11.72□□□□□ -0.53
PKP4-201ENST00000389757 CLIP2Q9UDT6 1046 aa11.72□□□□□ -0.53
PKP4-201ENST00000389757 ERLIN1O75477 346 aa11.72□□□□□ -0.53
PKP4-201ENST00000389757 TCP10Q12799 353 aa11.72□□□□□ -0.53
PKP4-201ENST00000389757 SEPT12Q8IYM1 358 aa11.72□□□□□ -0.53
PKP4-201ENST00000389757 PRDM1O75626 825 aa11.71□□□□□ -0.53
PKP4-201ENST00000389757 F13A1P00488 732 aa11.71□□□□□ -0.53
PKP4-201ENST00000389757 ZNF165P49910 485 aa11.71□□□□□ -0.53
PKP4-201ENST00000389757 NCBP1Q09161 790 aaKnown RBP11.71□□□□□ -0.53
PKP4-201ENST00000389757 SEPT7Q16181 437 aaKnown RBP11.71□□□□□ -0.53
PKP4-201ENST00000389757 FAM182BQ5T319 152 aa11.71□□□□□ -0.53
PKP4-201ENST00000389757 DPY19L2Q6NUT2 758 aa11.71□□□□□ -0.53
PKP4-201ENST00000389757 SNX21Q969T3 373 aa11.71□□□□□ -0.53
PKP4-201ENST00000389757 TEKT1Q969V4 418 aa11.71□□□□□ -0.53
PKP4-201ENST00000389757 TTF2Q9UNY4 1162 aaKnown RBP11.71□□□□□ -0.53
PKP4-201ENST00000389757 TNFAIP1Q13829 316 aa11.71□□□□□ -0.53
PKP4-201ENST00000389757 AXDND1Q5T1B0 1012 aaPredicted RBP11.71□□□□□ -0.53
PKP4-201ENST00000389757 MAPKAPK5Q8IW41 473 aa11.71□□□□□ -0.53
PKP4-201ENST00000389757 TCHPQ9BT92 498 aa11.71□□□□□ -0.53
PKP4-201ENST00000389757 SPATA31A3Q5VYP0 1347 aa11.71□□□□□ -0.53
PKP4-201ENST00000389757 ZNF532Q9HCE3 1301 aa11.71□□□□□ -0.53
PKP4-201ENST00000389757 SPTLC2O15270 562 aa11.71□□□□□ -0.53
PKP4-201ENST00000389757 ZBTB1Q9Y2K1 713 aa11.71□□□□□ -0.53
PKP4-201ENST00000389757 BLMP54132 1417 aaPredicted RBP11.71□□□□□ -0.54
PKP4-201ENST00000389757 BACH1O14867 736 aa11.71□□□□□ -0.54
PKP4-201ENST00000389757 KRT13P13646 458 aa11.71□□□□□ -0.54
PKP4-201ENST00000389757 PRKG1Q13976 671 aa11.71□□□□□ -0.54
PKP4-201ENST00000389757 IBTKQ9P2D0 1353 aaPredicted RBP11.71□□□□□ -0.54
PKP4-201ENST00000389757 ARHGAP27Q6ZUM4 889 aa11.71□□□□□ -0.54
PKP4-201ENST00000389757 BRAPQ7Z569 592 aa11.71□□□□□ -0.54
PKP4-201ENST00000389757 IVNS1ABPQ9Y6Y0 642 aa11.71□□□□□ -0.54
PKP4-201ENST00000389757 KIF5CO60282 957 aa11.7□□□□□ -0.54
PKP4-201ENST00000389757 MCM7P33993 719 aa11.7□□□□□ -0.54
PKP4-201ENST00000389757 ZYXQ15942 572 aaKnown RBP11.7□□□□□ -0.54
PKP4-201ENST00000389757 USP44Q9H0E7 712 aa11.7□□□□□ -0.54
PKP4-201ENST00000389757 PUF60Q9UHX1 559 aaKnown RBP11.7□□□□□ -0.54
PKP4-201ENST00000389757 EAPPQ56P03 285 aaPredicted RBP11.7□□□□□ -0.54
PKP4-201ENST00000389757 TGFBRAP1Q8WUH2 860 aa11.7□□□□□ -0.54
PKP4-201ENST00000389757 USP26Q9BXU7 913 aa11.7□□□□□ -0.54
PKP4-201ENST00000389757 CNPY2Q9Y2B0 182 aa11.7□□□□□ -0.54
PKP4-201ENST00000389757 A2ML1A8K2U0 1454 aa11.7□□□□□ -0.54
PKP4-201ENST00000389757 KIF2AO00139 706 aaPredicted RBP11.7□□□□□ -0.54
PKP4-201ENST00000389757 USP48Q86UV5 1035 aa11.7□□□□□ -0.54
PKP4-201ENST00000389757 USP40Q9NVE5 1235 aa11.7□□□□□ -0.54
PKP4-201ENST00000389757 TET3O43151 1660 aa11.7□□□□□ -0.54
PKP4-201ENST00000389757 SLC27A2O14975 620 aa11.7□□□□□ -0.54
PKP4-201ENST00000389757 PHACTR2O75167 634 aa11.7□□□□□ -0.54
PKP4-201ENST00000389757 ATP5JP18859 108 aa11.7□□□□□ -0.54
PKP4-201ENST00000389757 RPS6KB1P23443 525 aa11.7□□□□□ -0.54
PKP4-201ENST00000389757 GIGYF2Q6Y7W6 1299 aaKnown RBP11.7□□□□□ -0.54
PKP4-201ENST00000389757 FAM227BQ96M60 508 aa11.7□□□□□ -0.54
PKP4-201ENST00000389757 ANGEL1Q9UNK9 670 aaKnown RBP11.7□□□□□ -0.54
PKP4-201ENST00000389757 CLASP1Q7Z460 1538 aa11.7□□□□□ -0.54
PKP4-201ENST00000389757 PSMA7O14818 248 aa11.69□□□□□ -0.54
PKP4-201ENST00000389757 N4BP3O15049 544 aa11.69□□□□□ -0.54
PKP4-201ENST00000389757 SLC1A4P43007 532 aa11.69□□□□□ -0.54
PKP4-201ENST00000389757 BEND3Q5T5X7 828 aa11.69□□□□□ -0.54
PKP4-201ENST00000389757 DTHD1Q6ZMT9 781 aa11.69□□□□□ -0.54
PKP4-201ENST00000389757 DHX58Q96C10 678 aa11.69□□□□□ -0.54
PKP4-201ENST00000389757 GLT8D2Q9H1C3 349 aa11.69□□□□□ -0.54
PKP4-201ENST00000389757 FAM13AO94988 1023 aa11.69□□□□□ -0.54
PKP4-201ENST00000389757 MMRN2Q9H8L6 949 aa11.69□□□□□ -0.54
PKP4-201ENST00000389757 SP4Q02446 784 aa11.69□□□□□ -0.54
PKP4-201ENST00000389757 DEXIO95424 95 aa11.69□□□□□ -0.54
PKP4-201ENST00000389757 CCDC172P0C7W6 258 aa11.69□□□□□ -0.54
PKP4-201ENST00000389757 ZBTB21Q9ULJ3 1066 aa11.69□□□□□ -0.54
PKP4-201ENST00000389757 C8orf34Q49A92 452 aa11.69□□□□□ -0.54
PKP4-201ENST00000389757 BEGAINQ9BUH8 593 aa11.69□□□□□ -0.54
PKP4-201ENST00000389757 USP25Q9UHP3 1055 aa11.69□□□□□ -0.54
PKP4-201ENST00000389757 NDUFB9Q9Y6M9 179 aa11.69□□□□□ -0.54
PKP4-201ENST00000389757 ABCC4O15439 1325 aa11.68□□□□□ -0.54
PKP4-201ENST00000389757 GYG1P46976 350 aa11.68□□□□□ -0.54
PKP4-201ENST00000389757 DNM1Q05193 864 aaKnown RBP11.68□□□□□ -0.54
PKP4-201ENST00000389757 FCHSD1Q86WN1 690 aa11.68□□□□□ -0.54
PKP4-201ENST00000389757 SERPINB2P05120 415 aa11.68□□□□□ -0.54
PKP4-201ENST00000389757 GSDMDP57764 484 aa11.68□□□□□ -0.54
PKP4-201ENST00000389757 SPAG1Q07617 926 aa11.68□□□□□ -0.54
PKP4-201ENST00000389757 TMC6Q7Z403 805 aa11.68□□□□□ -0.54
PKP4-201ENST00000389757 SGSM2O43147 1006 aa11.68□□□□□ -0.54
PKP4-201ENST00000389757 ZBED4O75132 1171 aa11.68□□□□□ -0.54
PKP4-201ENST00000389757 BRDTQ58F21 947 aaPredicted RBP11.68□□□□□ -0.54
PKP4-201ENST00000389757 SSH3Q8TE77 659 aa11.68□□□□□ -0.54
PKP4-201ENST00000389757 PLEKHF1Q96S99 279 aa11.68□□□□□ -0.54
PKP4-201ENST00000389757 ADGRL3Q9HAR2 1447 aa11.68□□□□□ -0.54
PKP4-201ENST00000389757 CHRNDQ07001 517 aa11.68□□□□□ -0.54
PKP4-201ENST00000389757 BRPF3Q9ULD4 1205 aa11.68□□□□□ -0.54
PKP4-201ENST00000389757 KLHL40Q2TBA0 621 aa11.67□□□□□ -0.54
PKP4-201ENST00000389757 LETM2Q2VYF4 491 aa11.67□□□□□ -0.54
PKP4-201ENST00000389757 INTS4Q96HW7 963 aaKnown RBP11.67□□□□□ -0.54
PKP4-201ENST00000389757 SPAG5Q96R06 1193 aa11.67□□□□□ -0.54
PKP4-201ENST00000389757 ARPP21Q9UBL0 812 aaPredicted RBP11.67□□□□□ -0.54
PKP4-201ENST00000389757 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms