RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 PKNOX2Q96KN3 472 aa14.81□□□□□ -0.04
PTPRN2-203ENST00000389418 USP44Q9H0E7 712 aa14.81□□□□□ -0.04
PTPRN2-203ENST00000389418 ZBTB21Q9ULJ3 1066 aa14.81□□□□□ -0.04
PTPRN2-203ENST00000389418 SETD1BQ9UPS6 1966 aaKnown RBP14.81□□□□□ -0.04
PTPRN2-203ENST00000389418 TRIM75PA6NK02 468 aa14.81□□□□□ -0.04
PTPRN2-203ENST00000389418 CCDC172P0C7W6 258 aa14.81□□□□□ -0.04
PTPRN2-203ENST00000389418 NEFHP12036 1026 aa14.81□□□□□ -0.04
PTPRN2-203ENST00000389418 TNNT1P13805 278 aa14.81□□□□□ -0.04
PTPRN2-203ENST00000389418 SEPT7Q16181 437 aaKnown RBP14.81□□□□□ -0.04
PTPRN2-203ENST00000389418 MCM3P25205 808 aa14.81□□□□□ -0.04
PTPRN2-203ENST00000389418 KIF18AQ8NI77 898 aa14.81□□□□□ -0.04
PTPRN2-203ENST00000389418 RBM28Q9NW13 759 aaKnown RBP14.81□□□□□ -0.04
PTPRN2-203ENST00000389418 PDCL2Q8N4E4 241 aa14.81□□□□□ -0.04
PTPRN2-203ENST00000389418 MRPS27Q92552 414 aaKnown RBP14.81□□□□□ -0.04
PTPRN2-203ENST00000389418 RRP36Q96EU6 259 aaKnown RBP14.81□□□□□ -0.04
PTPRN2-203ENST00000389418 C16orf45Q96MC5 204 aaPredicted RBP14.81□□□□□ -0.04
PTPRN2-203ENST00000389418 GPCPD1Q9NPB8 672 aa14.81□□□□□ -0.04
PTPRN2-203ENST00000389418 GGA1Q9UJY5 639 aa14.81□□□□□ -0.04
PTPRN2-203ENST00000389418 TMC6Q7Z403 805 aa14.8□□□□□ -0.04
PTPRN2-203ENST00000389418 WDR66Q8TBY9 1149 aa14.8□□□□□ -0.04
PTPRN2-203ENST00000389418 MYOM2P54296 1465 aa14.8□□□□□ -0.04
PTPRN2-203ENST00000389418 NEURL1BA8MQ27 555 aa14.8□□□□□ -0.04
PTPRN2-203ENST00000389418 NEBLO76041 1014 aa14.8□□□□□ -0.04
PTPRN2-203ENST00000389418 RUFY3Q7L099 469 aa14.8□□□□□ -0.04
PTPRN2-203ENST00000389418 BRAPQ7Z569 592 aa14.8□□□□□ -0.04
PTPRN2-203ENST00000389418 MAPKAPK5Q8IW41 473 aa14.8□□□□□ -0.04
PTPRN2-203ENST00000389418 DOK7Q18PE1 504 aa14.8□□□□□ -0.04
PTPRN2-203ENST00000389418 NUP88Q99567 741 aaPredicted RBP14.8□□□□□ -0.04
PTPRN2-203ENST00000389418 EXOC1Q9NV70 894 aa14.8□□□□□ -0.04
PTPRN2-203ENST00000389418 AATKQ6ZMQ8 1374 aa14.8□□□□□ -0.04
PTPRN2-203ENST00000389418 H0YIN7 160 aa14.8□□□□□ -0.04
PTPRN2-203ENST00000389418 SYT1P21579 422 aa14.8□□□□□ -0.04
PTPRN2-203ENST00000389418 GTF2IP78347 998 aa14.8□□□□□ -0.04
PTPRN2-203ENST00000389418 LRRC24Q50LG9 513 aa14.8□□□□□ -0.04
PTPRN2-203ENST00000389418 CTAGE1Q96RT6 745 aa14.8□□□□□ -0.04
PTPRN2-203ENST00000389418 URI1O94763 535 aaPredicted RBP14.79□□□□□ -0.04
PTPRN2-203ENST00000389418 FAM196AQ6ZSG2 479 aa14.79□□□□□ -0.04
PTPRN2-203ENST00000389418 TET3O43151 1660 aa14.79□□□□□ -0.04
PTPRN2-203ENST00000389418 GPAA1O43292 621 aa14.79□□□□□ -0.04
PTPRN2-203ENST00000389418 TCIRG1Q13488 830 aa14.79□□□□□ -0.04
PTPRN2-203ENST00000389418 SYCP3Q8IZU3 236 aa14.79□□□□□ -0.04
PTPRN2-203ENST00000389418 SMARCC2Q8TAQ2 1214 aa14.79□□□□□ -0.04
PTPRN2-203ENST00000389418 TMEM87BQ96K49 555 aa14.79□□□□□ -0.04
PTPRN2-203ENST00000389418 TTC16Q8NEE8 873 aa14.79□□□□□ -0.04
PTPRN2-203ENST00000389418 SUPT20HQ8NEM7 779 aa14.79□□□□□ -0.04
PTPRN2-203ENST00000389418 VTI1AQ96AJ9 217 aa14.79□□□□□ -0.04
PTPRN2-203ENST00000389418 SEC62Q99442 399 aaKnown RBP14.79□□□□□ -0.04
PTPRN2-203ENST00000389418 PAFAH1B1P43034 410 aa14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 RPS8P62241 208 aaKnown RBP14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 FLAD1Q8NFF5 587 aa14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 LPIN2Q92539 896 aa14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 NPHP4O75161 1426 aaPredicted RBP14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 MACROD2A1Z1Q3 448 aa14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 PTPDC1A2A3K4 754 aa14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 BAG6P46379 1132 aa14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 LEKR1Q6ZMV7 388 aa14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 FCHSD1Q86WN1 690 aa14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 MROH5Q6ZUA9 1318 aa14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 SPDYE3A6NKU9 549 aa14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 CTDSPL2Q05D32 466 aa14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 PPP2R5BQ15173 497 aa14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 APPBP2Q92624 585 aa14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 PUS3Q9BZE2 481 aaKnown RBP14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 SGSM2O43147 1006 aa14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 SCNN1DP51172 638 aa14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 KIAA0825Q8IV33 1275 aa14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 HOOK2Q96ED9 719 aa14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 GLT8D2Q9H1C3 349 aa14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 FAM135BQ49AJ0 1406 aa14.78□□□□□ -0.04
PTPRN2-203ENST00000389418 STAT6P42226 847 aa14.77□□□□□ -0.04
PTPRN2-203ENST00000389418 ANO6Q4KMQ2 910 aa14.77□□□□□ -0.04
PTPRN2-203ENST00000389418 TDRD12Q587J7 1177 aaKnown RBP14.77□□□□□ -0.04
PTPRN2-203ENST00000389418 CCDC174Q6PII3 467 aa14.77□□□□□ -0.04
PTPRN2-203ENST00000389418 PDE6BP35913 854 aa14.77□□□□□ -0.04
PTPRN2-203ENST00000389418 KIF4BQ2VIQ3 1234 aa14.77□□□□□ -0.04
PTPRN2-203ENST00000389418 MAP9Q49MG5 647 aa14.77□□□□□ -0.04
PTPRN2-203ENST00000389418 SMIM5Q71RC9 77 aa14.77□□□□□ -0.04
PTPRN2-203ENST00000389418 FAM200AQ8TCP9 573 aa14.77□□□□□ -0.05
PTPRN2-203ENST00000389418 PSMA7O14818 248 aa14.77□□□□□ -0.05
PTPRN2-203ENST00000389418 BCAMP50895 628 aa14.77□□□□□ -0.05
PTPRN2-203ENST00000389418 BRINP3Q76B58 766 aa14.77□□□□□ -0.05
PTPRN2-203ENST00000389418 CPXCR1Q8N123 301 aa14.77□□□□□ -0.05
PTPRN2-203ENST00000389418 IQGAP3Q86VI3 1631 aa14.77□□□□□ -0.05
PTPRN2-203ENST00000389418 CRKLP46109 303 aaKnown RBP14.76□□□□□ -0.05
PTPRN2-203ENST00000389418 AKNAD1Q5T1N1 836 aa14.76□□□□□ -0.05
PTPRN2-203ENST00000389418 EAF2Q96CJ1 260 aaPredicted RBP14.76□□□□□ -0.05
PTPRN2-203ENST00000389418 CENPHQ9H3R5 247 aa14.76□□□□□ -0.05
PTPRN2-203ENST00000389418 ABCC4O15439 1325 aa14.76□□□□□ -0.05
PTPRN2-203ENST00000389418 SPTLC2O15270 562 aa14.76□□□□□ -0.05
PTPRN2-203ENST00000389418 EHBP1Q8NDI1 1231 aa14.76□□□□□ -0.05
PTPRN2-203ENST00000389418 ALS2CR12Q96Q35 445 aa14.76□□□□□ -0.05
PTPRN2-203ENST00000389418 DNAJC25Q9H1X3 360 aa14.76□□□□□ -0.05
PTPRN2-203ENST00000389418 AXIN2Q9Y2T1 843 aa14.76□□□□□ -0.05
PTPRN2-203ENST00000389418 CCDC66A2RUB6 948 aa14.76□□□□□ -0.05
PTPRN2-203ENST00000389418 PPIP5K2O43314 1243 aa14.76□□□□□ -0.05
PTPRN2-203ENST00000389418 MCM7P33993 719 aa14.76□□□□□ -0.05
PTPRN2-203ENST00000389418 KRT79Q5XKE5 535 aa14.76□□□□□ -0.05
PTPRN2-203ENST00000389418 TBC1D22AQ8WUA7 517 aa14.76□□□□□ -0.05
PTPRN2-203ENST00000389418 TRIM47Q96LD4 638 aa14.76□□□□□ -0.05
PTPRN2-203ENST00000389418 PLEKHF1Q96S99 279 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms