RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 SATB1Q01826 763 aa17.46■□□□□ 0.39
ALK-201ENST00000389048 KRT28Q7Z3Y7 464 aa17.46■□□□□ 0.39
ALK-201ENST00000389048 USP37Q86T82 979 aa17.46■□□□□ 0.39
ALK-201ENST00000389048 RNF34Q969K3 372 aa17.46■□□□□ 0.39
ALK-201ENST00000389048 KIFC2Q96AC6 838 aa17.46■□□□□ 0.39
ALK-201ENST00000389048 DDX39AO00148 427 aaKnown RBP17.46■□□□□ 0.39
ALK-201ENST00000389048 UQCRFS1P1P0C7P4 283 aa17.46■□□□□ 0.39
ALK-201ENST00000389048 AMOTL2Q9Y2J4 779 aa17.46■□□□□ 0.39
ALK-201ENST00000389048 FBXO31Q5XUX0 539 aaPredicted RBP17.46■□□□□ 0.39
ALK-201ENST00000389048 ARHGEF2Q92974 986 aaKnown RBP17.46■□□□□ 0.39
ALK-201ENST00000389048 PLEKHH2Q8IVE3 1493 aa17.46■□□□□ 0.38
ALK-201ENST00000389048 VAV2P52735 878 aa17.45■□□□□ 0.38
ALK-201ENST00000389048 LACTBP83111 547 aaPredicted RBP17.45■□□□□ 0.38
ALK-201ENST00000389048 BAG1Q99933 345 aaPredicted RBP17.45■□□□□ 0.38
ALK-201ENST00000389048 RASSF4Q9H2L5 321 aa17.45■□□□□ 0.38
ALK-201ENST00000389048 ATP11AP98196 1134 aa17.45■□□□□ 0.38
ALK-201ENST00000389048 LETM2Q2VYF4 491 aa17.45■□□□□ 0.38
ALK-201ENST00000389048 BEND3Q5T5X7 828 aa17.45■□□□□ 0.38
ALK-201ENST00000389048 MGARPQ8TDB4 240 aa17.45■□□□□ 0.38
ALK-201ENST00000389048 GPCPD1Q9NPB8 672 aa17.45■□□□□ 0.38
ALK-201ENST00000389048 MTRF1LQ9UGC7 380 aaKnown RBP17.45■□□□□ 0.38
ALK-201ENST00000389048 USTQ9Y2C2 406 aa17.45■□□□□ 0.38
ALK-201ENST00000389048 TXNDC9O14530 226 aa17.45■□□□□ 0.38
ALK-201ENST00000389048 ADGRF5Q8IZF2 1346 aa17.45■□□□□ 0.38
ALK-201ENST00000389048 BACH1O14867 736 aa17.45■□□□□ 0.38
ALK-201ENST00000389048 BIRC3Q13489 604 aa17.45■□□□□ 0.38
ALK-201ENST00000389048 HDXQ7Z353 690 aa17.45■□□□□ 0.38
ALK-201ENST00000389048 IFNL2Q8IZJ0 200 aa17.45■□□□□ 0.38
ALK-201ENST00000389048 VPS52Q8N1B4 723 aa17.45■□□□□ 0.38
ALK-201ENST00000389048 GDAP1L1Q96MZ0 367 aa17.45■□□□□ 0.38
ALK-201ENST00000389048 ATP2A2P16615 1042 aaKnown RBP17.45■□□□□ 0.38
ALK-201ENST00000389048 TFCP2Q12800 502 aa17.45■□□□□ 0.38
ALK-201ENST00000389048 FNBP4Q8N3X1 1017 aaPredicted RBP17.45■□□□□ 0.38
ALK-201ENST00000389048 CALCOCO2Q13137 446 aa17.44■□□□□ 0.38
ALK-201ENST00000389048 SPOPO43791 374 aa17.44■□□□□ 0.38
ALK-201ENST00000389048 AFAP1L1Q8TED9 768 aa17.44■□□□□ 0.38
ALK-201ENST00000389048 NOC4LQ9BVI4 516 aaKnown RBP17.44■□□□□ 0.38
ALK-201ENST00000389048 GMNNO75496 209 aa17.44■□□□□ 0.38
ALK-201ENST00000389048 CWF19L2Q2TBE0 894 aaKnown RBP17.44■□□□□ 0.38
ALK-201ENST00000389048 CNNM2Q9H8M5 875 aa17.44■□□□□ 0.38
ALK-201ENST00000389048 SNRPA1P09661 255 aaKnown RBP17.44■□□□□ 0.38
ALK-201ENST00000389048 CREB3L3Q68CJ9 461 aa17.44■□□□□ 0.38
ALK-201ENST00000389048 NIP7Q9Y221 180 aaKnown RBP eCLIP17.44■□□□□ 0.38
ALK-201ENST00000389048 LUC7L2Q9Y383 392 aaKnown RBP17.44■□□□□ 0.38
ALK-201ENST00000389048 RAD51AP2Q09MP3 1159 aa17.43■□□□□ 0.38
ALK-201ENST00000389048 PTPROQ16827 1216 aa17.43■□□□□ 0.38
ALK-201ENST00000389048 INF2Q27J81 1249 aa17.43■□□□□ 0.38
ALK-201ENST00000389048 DTHD1Q6ZMT9 781 aa17.43■□□□□ 0.38
ALK-201ENST00000389048 KLHL7Q8IXQ5 586 aa17.43■□□□□ 0.38
ALK-201ENST00000389048 C8orf58Q8NAV2 365 aa17.43■□□□□ 0.38
ALK-201ENST00000389048 NEDD9Q14511 834 aa17.43■□□□□ 0.38
ALK-201ENST00000389048 SETDB2Q96T68 719 aa17.43■□□□□ 0.38
ALK-201ENST00000389048 FEZ2Q9UHY8 353 aaPredicted RBP17.43■□□□□ 0.38
ALK-201ENST00000389048 ABCC11Q96J66 1382 aa17.43■□□□□ 0.38
ALK-201ENST00000389048 BICDL2A1A5D9 508 aa17.43■□□□□ 0.38
ALK-201ENST00000389048 NKIRAS1Q9NYS0 192 aa17.43■□□□□ 0.38
ALK-201ENST00000389048 CAMSAP2Q08AD1 1489 aa17.43■□□□□ 0.38
ALK-201ENST00000389048 GABPAQ06546 454 aa17.43■□□□□ 0.38
ALK-201ENST00000389048 WDR66Q8TBY9 1149 aa17.43■□□□□ 0.38
ALK-201ENST00000389048 MKRN1Q9UHC7 482 aaKnown RBP17.43■□□□□ 0.38
ALK-201ENST00000389048 CCDC169A6NNP5 214 aa17.43■□□□□ 0.38
ALK-201ENST00000389048 AKR1B15C9JRZ8 316 aaPredicted RBP17.43■□□□□ 0.38
ALK-201ENST00000389048 TRAF5O00463 557 aa17.43■□□□□ 0.38
ALK-201ENST00000389048 RFC1P35251 1148 aaPredicted RBP17.43■□□□□ 0.38
ALK-201ENST00000389048 RAB3GAP1Q15042 981 aa17.43■□□□□ 0.38
ALK-201ENST00000389048 ZYXQ15942 572 aaKnown RBP17.43■□□□□ 0.38
ALK-201ENST00000389048 TRIM6Q9C030 488 aaPredicted RBP17.43■□□□□ 0.38
ALK-201ENST00000389048 TTLL3Q9Y4R7 772 aa17.43■□□□□ 0.38
ALK-201ENST00000389048 TNNC1P63316 161 aa17.42■□□□□ 0.38
ALK-201ENST00000389048 SPAG1Q07617 926 aa17.42■□□□□ 0.38
ALK-201ENST00000389048 CPSF2Q9P2I0 782 aaKnown RBP17.42■□□□□ 0.38
ALK-201ENST00000389048 KRT24Q2M2I5 525 aa17.42■□□□□ 0.38
ALK-201ENST00000389048 GINS2Q9Y248 185 aa17.42■□□□□ 0.38
ALK-201ENST00000389048 CCNT1O60563 726 aaKnown RBP17.42■□□□□ 0.38
ALK-201ENST00000389048 WASLO00401 505 aaPredicted RBP17.42■□□□□ 0.38
ALK-201ENST00000389048 PPFIBP2Q8ND30 876 aa17.42■□□□□ 0.38
ALK-201ENST00000389048 CLNS1AP54105 237 aaKnown RBP17.42■□□□□ 0.38
ALK-201ENST00000389048 STK38LQ9Y2H1 464 aa17.41■□□□□ 0.38
ALK-201ENST00000389048 SEC24BO95487 1268 aa17.41■□□□□ 0.38
ALK-201ENST00000389048 ELF2Q15723 593 aa17.41■□□□□ 0.38
ALK-201ENST00000389048 SARNPP82979 210 aaKnown RBP17.41■□□□□ 0.38
ALK-201ENST00000389048 CCDC110Q8TBZ0 833 aa17.41■□□□□ 0.38
ALK-201ENST00000389048 EHBP1L1Q8N3D4 1523 aa17.41■□□□□ 0.38
ALK-201ENST00000389048 FCHSD1Q86WN1 690 aa17.41■□□□□ 0.38
ALK-201ENST00000389048 CARD6Q9BX69 1037 aa17.4■□□□□ 0.38
ALK-201ENST00000389048 FAM204AQ9H8W3 233 aa17.4■□□□□ 0.38
ALK-201ENST00000389048 CAVIN2O95810 425 aa17.4■□□□□ 0.38
ALK-201ENST00000389048 RUFY3Q7L099 469 aa17.4■□□□□ 0.38
ALK-201ENST00000389048 HS2ST1Q7LGA3 356 aa17.4■□□□□ 0.38
ALK-201ENST00000389048 IGSF22Q8N9C0 903 aa17.4■□□□□ 0.38
ALK-201ENST00000389048 TACO1Q9BSH4 297 aaKnown RBP17.4■□□□□ 0.38
ALK-201ENST00000389048 MTUS1Q9ULD2 1270 aa17.4■□□□□ 0.38
ALK-201ENST00000389048 DISP3Q9P2K9 1392 aa17.4■□□□□ 0.38
ALK-201ENST00000389048 SORBS3O60504 671 aa17.4■□□□□ 0.38
ALK-201ENST00000389048 ATXN8OSP0DMR3 200 aa17.4■□□□□ 0.38
ALK-201ENST00000389048 FRMD4BQ9Y2L6 1034 aa17.4■□□□□ 0.38
ALK-201ENST00000389048 DAPK3O43293 454 aa17.4■□□□□ 0.38
ALK-201ENST00000389048 TNFAIP3P21580 790 aa17.4■□□□□ 0.38
ALK-201ENST00000389048 NCBP1Q09161 790 aaKnown RBP17.4■□□□□ 0.38
ALK-201ENST00000389048 PIK3AP1Q6ZUJ8 805 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms