RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 LRRC7Q96NW7 1537 aa21.7■■□□□ 1.06
CSPG5-202ENST00000383738 LDHBP07195 334 aaKnown RBP21.69■■□□□ 1.06
CSPG5-202ENST00000383738 LMOD1P29536 600 aaPredicted RBP21.69■■□□□ 1.06
CSPG5-202ENST00000383738 HMG20BQ9P0W2 317 aa21.69■■□□□ 1.06
CSPG5-202ENST00000383738 NLRP5P59047 1200 aa21.69■■□□□ 1.06
CSPG5-202ENST00000383738 SLC27A2O14975 620 aa21.69■■□□□ 1.06
CSPG5-202ENST00000383738 KLHL10Q6JEL2 608 aa21.69■■□□□ 1.06
CSPG5-202ENST00000383738 JMYQ8N9B5 988 aa21.69■■□□□ 1.06
CSPG5-202ENST00000383738 DDX19AQ9NUU7 478 aaKnown RBP21.69■■□□□ 1.06
CSPG5-202ENST00000383738 AGLP35573 1532 aa21.69■■□□□ 1.06
CSPG5-202ENST00000383738 ZNF532Q9HCE3 1301 aa21.69■■□□□ 1.06
CSPG5-202ENST00000383738 ADGRB1O14514 1584 aa21.69■■□□□ 1.06
CSPG5-202ENST00000383738 SMTNL1A8MU46 457 aa21.69■■□□□ 1.06
CSPG5-202ENST00000383738 SASH1O94885 1247 aa21.69■■□□□ 1.06
CSPG5-202ENST00000383738 CTDSPL2Q05D32 466 aa21.69■■□□□ 1.06
CSPG5-202ENST00000383738 PDE4BQ07343 736 aa21.69■■□□□ 1.06
CSPG5-202ENST00000383738 GPR101Q96P66 508 aaPredicted RBP21.69■■□□□ 1.06
CSPG5-202ENST00000383738 SSRP1Q08945 709 aaKnown RBP21.68■■□□□ 1.06
CSPG5-202ENST00000383738 WDR78Q5VTH9 848 aa21.68■■□□□ 1.06
CSPG5-202ENST00000383738 NLRP10Q86W26 655 aa21.68■■□□□ 1.06
CSPG5-202ENST00000383738 KIF2CQ99661 725 aa21.68■■□□□ 1.06
CSPG5-202ENST00000383738 ANO10Q9NW15 660 aa21.68■■□□□ 1.06
CSPG5-202ENST00000383738 ZNF215Q9UL58 517 aaPredicted RBP21.68■■□□□ 1.06
CSPG5-202ENST00000383738 AFF2P51816 1311 aa21.68■■□□□ 1.06
CSPG5-202ENST00000383738 MARCKSP29966 332 aaPredicted RBP21.68■■□□□ 1.06
CSPG5-202ENST00000383738 LPIN2Q92539 896 aa21.68■■□□□ 1.06
CSPG5-202ENST00000383738 SLU7O95391 586 aaKnown RBP21.67■■□□□ 1.06
CSPG5-202ENST00000383738 TSPY3P0CV98 308 aa21.67■■□□□ 1.06
CSPG5-202ENST00000383738 TSPY8P0CW00 308 aa21.67■■□□□ 1.06
CSPG5-202ENST00000383738 MYO3AQ8NEV4 1616 aa21.67■■□□□ 1.06
CSPG5-202ENST00000383738 KRT18P05783 430 aaKnown RBP21.67■■□□□ 1.06
CSPG5-202ENST00000383738 ERFEQ4G0M1 354 aa21.67■■□□□ 1.06
CSPG5-202ENST00000383738 CCDC47Q96A33 483 aaKnown RBP21.67■■□□□ 1.06
CSPG5-202ENST00000383738 PCCAP05165 728 aaPredicted RBP21.67■■□□□ 1.06
CSPG5-202ENST00000383738 GNG11P61952 73 aa21.67■■□□□ 1.06
CSPG5-202ENST00000383738 PTPN12Q05209 780 aaKnown RBP21.67■■□□□ 1.06
CSPG5-202ENST00000383738 FEZ1Q99689 392 aa21.67■■□□□ 1.06
CSPG5-202ENST00000383738 SRRTQ9BXP5 876 aaKnown RBP21.67■■□□□ 1.06
CSPG5-202ENST00000383738 KAT14Q9H8E8 782 aa21.67■■□□□ 1.06
CSPG5-202ENST00000383738 CBX8Q9HC52 389 aa21.67■■□□□ 1.06
CSPG5-202ENST00000383738 IFIT1BQ5T764 474 aaKnown RBP21.66■■□□□ 1.06
CSPG5-202ENST00000383738 SUSD4Q5VX71 490 aa21.66■■□□□ 1.06
CSPG5-202ENST00000383738 SPTY2D1Q68D10 685 aaPredicted RBP21.66■■□□□ 1.06
CSPG5-202ENST00000383738 CCDC102BQ68D86 513 aa21.66■■□□□ 1.06
CSPG5-202ENST00000383738 ZNF804AQ7Z570 1209 aa21.66■■□□□ 1.06
CSPG5-202ENST00000383738 LIG1P18858 919 aa21.66■■□□□ 1.06
CSPG5-202ENST00000383738 RASEFQ8IZ41 740 aa21.66■■□□□ 1.06
CSPG5-202ENST00000383738 CAGE1Q8TC20 777 aa21.66■■□□□ 1.06
CSPG5-202ENST00000383738 SDR42E1Q8WUS8 393 aa21.66■■□□□ 1.06
CSPG5-202ENST00000383738 IBTKQ9P2D0 1353 aaPredicted RBP21.66■■□□□ 1.06
CSPG5-202ENST00000383738 TCP10Q12799 353 aa21.66■■□□□ 1.06
CSPG5-202ENST00000383738 TTLL12Q14166 644 aaPredicted RBP21.66■■□□□ 1.06
CSPG5-202ENST00000383738 DOK7Q18PE1 504 aa21.66■■□□□ 1.06
CSPG5-202ENST00000383738 SETQ01105 290 aaPredicted RBP21.66■■□□□ 1.06
CSPG5-202ENST00000383738 SPATA5Q8NB90 893 aa21.66■■□□□ 1.06
CSPG5-202ENST00000383738 ALG1Q9BT22 464 aa21.66■■□□□ 1.06
CSPG5-202ENST00000383738 CCDC196A0A1B0GTZ2 297 aa21.65■■□□□ 1.06
CSPG5-202ENST00000383738 RUFY3Q7L099 469 aa21.65■■□□□ 1.06
CSPG5-202ENST00000383738 ZNF397Q8NF99 534 aaPredicted RBP21.65■■□□□ 1.06
CSPG5-202ENST00000383738 ESR2Q92731 530 aa21.65■■□□□ 1.06
CSPG5-202ENST00000383738 TNS3Q68CZ2 1445 aa21.65■■□□□ 1.06
CSPG5-202ENST00000383738 HSPA1LP34931 641 aa21.65■■□□□ 1.06
CSPG5-202ENST00000383738 CHMP4BP1P59074 171 aa21.65■■□□□ 1.06
CSPG5-202ENST00000383738 DHX32Q7L7V1 743 aaKnown RBP21.65■■□□□ 1.06
CSPG5-202ENST00000383738 SEC63Q9UGP8 760 aaKnown RBP21.65■■□□□ 1.06
CSPG5-202ENST00000383738 SETBP1Q9Y6X0 1596 aa21.65■■□□□ 1.06
CSPG5-202ENST00000383738 PREX1Q8TCU6 1659 aa21.65■■□□□ 1.06
CSPG5-202ENST00000383738 IL6STP40189 918 aaPredicted RBP21.65■■□□□ 1.06
CSPG5-202ENST00000383738 KRT27Q7Z3Y8 459 aa21.64■■□□□ 1.06
CSPG5-202ENST00000383738 STK32BQ9NY57 414 aa21.64■■□□□ 1.06
CSPG5-202ENST00000383738 TXLNAP40222 546 aa21.64■■□□□ 1.05
CSPG5-202ENST00000383738 ANAPC15P60006 121 aa21.64■■□□□ 1.05
CSPG5-202ENST00000383738 CHRNDQ07001 517 aa21.64■■□□□ 1.05
CSPG5-202ENST00000383738 INTS4Q96HW7 963 aaKnown RBP21.64■■□□□ 1.05
CSPG5-202ENST00000383738 ZNF76P36508 570 aa21.64■■□□□ 1.05
CSPG5-202ENST00000383738 CMTR1Q8N1G2 835 aaKnown RBP21.64■■□□□ 1.05
CSPG5-202ENST00000383738 ZNF287Q9HBT7 754 aa21.64■■□□□ 1.05
CSPG5-202ENST00000383738 OGFOD1Q8N543 542 aa21.63■■□□□ 1.05
CSPG5-202ENST00000383738 ZDHHC9Q9Y397 364 aa21.63■■□□□ 1.05
CSPG5-202ENST00000383738 IPO7O95373 1038 aaKnown RBP21.63■■□□□ 1.05
CSPG5-202ENST00000383738 ATP5JP18859 108 aa21.63■■□□□ 1.05
CSPG5-202ENST00000383738 NAP1L1P55209 391 aaKnown RBP21.63■■□□□ 1.05
CSPG5-202ENST00000383738 APPBP2Q92624 585 aa21.63■■□□□ 1.05
CSPG5-202ENST00000383738 UIMC1Q96RL1 719 aa21.63■■□□□ 1.05
CSPG5-202ENST00000383738 TSPYL1Q9H0U9 437 aa21.63■■□□□ 1.05
CSPG5-202ENST00000383738 MROH2AA6NES4 1674 aa21.63■■□□□ 1.05
CSPG5-202ENST00000383738 USP31Q70CQ4 1352 aa21.63■■□□□ 1.05
CSPG5-202ENST00000383738 GTF2IP78347 998 aa21.63■■□□□ 1.05
CSPG5-202ENST00000383738 ERCC6LQ2NKX8 1250 aa21.63■■□□□ 1.05
CSPG5-202ENST00000383738 ADCK5Q3MIX3 580 aa21.63■■□□□ 1.05
CSPG5-202ENST00000383738 COPRSQ9NQ92 184 aa21.63■■□□□ 1.05
CSPG5-202ENST00000383738 PALLDQ8WX93 1383 aa21.63■■□□□ 1.05
CSPG5-202ENST00000383738 JAK2O60674 1132 aa21.62■■□□□ 1.05
CSPG5-202ENST00000383738 TOP1P11387 765 aaKnown RBP21.62■■□□□ 1.05
CSPG5-202ENST00000383738 ZNF589Q86UQ0 364 aaPredicted RBP21.62■■□□□ 1.05
CSPG5-202ENST00000383738 MAPKAPK5Q8IW41 473 aa21.62■■□□□ 1.05
CSPG5-202ENST00000383738 GGA1Q9UJY5 639 aa21.62■■□□□ 1.05
CSPG5-202ENST00000383738 CDC42BPGQ6DT37 1551 aa21.62■■□□□ 1.05
CSPG5-202ENST00000383738 RTN1Q16799 776 aa21.62■■□□□ 1.05
CSPG5-202ENST00000383738 RIMS1Q86UR5 1692 aaKnown RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms