RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 HTTP42858 3142 aa17.71■□□□□ 0.43
SHOX-202ENST00000381575 CCER2I3L3R5 266 aa17.71■□□□□ 0.43
SHOX-202ENST00000381575 FGFR2P21802 821 aa17.71■□□□□ 0.43
SHOX-202ENST00000381575 SUPT20HL1Q3ZLR7 823 aa17.71■□□□□ 0.43
SHOX-202ENST00000381575 ATG9AQ7Z3C6 839 aa17.71■□□□□ 0.43
SHOX-202ENST00000381575 ZNF296Q8WUU4 475 aaPredicted RBP17.71■□□□□ 0.43
SHOX-202ENST00000381575 WNK4Q96J92 1243 aa17.71■□□□□ 0.43
SHOX-202ENST00000381575 TMEM39BQ9GZU3 492 aa17.71■□□□□ 0.43
SHOX-202ENST00000381575 LRRFIP2Q9Y608 721 aaKnown RBP17.71■□□□□ 0.43
SHOX-202ENST00000381575 USP2O75604 605 aaPredicted RBP17.7■□□□□ 0.42
SHOX-202ENST00000381575 IFIT1P09914 478 aaKnown RBP17.7■□□□□ 0.42
SHOX-202ENST00000381575 GJA5P36382 358 aa17.7■□□□□ 0.42
SHOX-202ENST00000381575 SREBF2Q12772 1141 aa17.7■□□□□ 0.42
SHOX-202ENST00000381575 MAP3K11Q16584 847 aa17.7■□□□□ 0.42
SHOX-202ENST00000381575 CTU1Q7Z7A3 348 aaKnown RBP17.7■□□□□ 0.42
SHOX-202ENST00000381575 PA2G4Q9UQ80 394 aaKnown RBP17.7■□□□□ 0.42
SHOX-202ENST00000381575 RARSP54136 660 aaKnown RBP17.69■□□□□ 0.42
SHOX-202ENST00000381575 MEIS3Q99687 375 aa17.69■□□□□ 0.42
SHOX-202ENST00000381575 CENPFP49454 3210 aa17.69■□□□□ 0.42
SHOX-202ENST00000381575 CT47B1P0C2W7 299 aaPredicted RBP17.68■□□□□ 0.42
SHOX-202ENST00000381575 SLC5A1P13866 664 aa17.68■□□□□ 0.42
SHOX-202ENST00000381575 IREB2P48200 963 aaKnown RBP17.68■□□□□ 0.42
SHOX-202ENST00000381575 SOX10P56693 466 aa17.68■□□□□ 0.42
SHOX-202ENST00000381575 TNFAIP1Q13829 316 aa17.68■□□□□ 0.42
SHOX-202ENST00000381575 TBC1D22AQ8WUA7 517 aa17.68■□□□□ 0.42
SHOX-202ENST00000381575 TEPSINQ96N21 525 aa17.68■□□□□ 0.42
SHOX-202ENST00000381575 API5Q9BZZ5 524 aaKnown RBP17.68■□□□□ 0.42
SHOX-202ENST00000381575 ELP3Q9H9T3 547 aa17.68■□□□□ 0.42
SHOX-202ENST00000381575 TNNQ9UQP3 1299 aa17.68■□□□□ 0.42
SHOX-202ENST00000381575 GPR25O00155 361 aa17.67■□□□□ 0.42
SHOX-202ENST00000381575 IGF2BP3O00425 579 aaKnown RBP eCLIP17.67■□□□□ 0.42
SHOX-202ENST00000381575 CNKSR2Q8WXI2 1034 aa17.67■□□□□ 0.42
SHOX-202ENST00000381575 TEKT1Q969V4 418 aa17.67■□□□□ 0.42
SHOX-202ENST00000381575 MLLT1Q03111 559 aaPredicted RBP17.66■□□□□ 0.42
SHOX-202ENST00000381575 ATP2B3Q16720 1220 aa17.66■□□□□ 0.42
SHOX-202ENST00000381575 LPIN2Q92539 896 aa17.66■□□□□ 0.42
SHOX-202ENST00000381575 MYH2Q9UKX2 1941 aa17.66■□□□□ 0.42
SHOX-202ENST00000381575 KIF16BQ96L93 1317 aa17.66■□□□□ 0.42
SHOX-202ENST00000381575 MANSC4A6NHS7 340 aaPredicted RBP17.66■□□□□ 0.42
SHOX-202ENST00000381575 ZBTB48P10074 688 aaPredicted RBP17.66■□□□□ 0.42
SHOX-202ENST00000381575 IFNL1Q8IU54 200 aa17.66■□□□□ 0.42
SHOX-202ENST00000381575 ANKRD13AQ8IZ07 590 aa17.66■□□□□ 0.42
SHOX-202ENST00000381575 ADORA1P30542 326 aa17.65■□□□□ 0.42
SHOX-202ENST00000381575 RGS19P49795 217 aa17.65■□□□□ 0.42
SHOX-202ENST00000381575 APOBEC3HQ6NTF7 200 aaKnown RBP17.65■□□□□ 0.42
SHOX-202ENST00000381575 OPTNQ96CV9 577 aa17.65■□□□□ 0.42
SHOX-202ENST00000381575 CEP126Q9P2H0 1117 aa17.65■□□□□ 0.42
SHOX-202ENST00000381575 FKTNO75072 461 aa17.64■□□□□ 0.41
SHOX-202ENST00000381575 PHKA1P46020 1223 aa17.64■□□□□ 0.41
SHOX-202ENST00000381575 TNNI2P48788 182 aa17.64■□□□□ 0.41
SHOX-202ENST00000381575 HDLBPQ00341 1268 aaKnown RBP17.64■□□□□ 0.41
SHOX-202ENST00000381575 DIXDC1Q155Q3 683 aa17.64■□□□□ 0.41
SHOX-202ENST00000381575 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.64■□□□□ 0.41
SHOX-202ENST00000381575 ZDHHC15Q96MV8 337 aa17.64■□□□□ 0.41
SHOX-202ENST00000381575 HPS5Q9UPZ3 1129 aa17.64■□□□□ 0.41
SHOX-202ENST00000381575 BCAR3O75815 825 aa17.63■□□□□ 0.41
SHOX-202ENST00000381575 CIAO1O76071 339 aa17.63■□□□□ 0.41
SHOX-202ENST00000381575 PRDX5P30044 214 aa17.63■□□□□ 0.41
SHOX-202ENST00000381575 VGLL4Q14135 290 aa17.63■□□□□ 0.41
SHOX-202ENST00000381575 FRAT1Q92837 279 aaPredicted RBP17.63■□□□□ 0.41
SHOX-202ENST00000381575 TMOD2Q9NZR1 351 aa17.63■□□□□ 0.41
SHOX-202ENST00000381575 MAST3O60307 1309 aa17.62■□□□□ 0.41
SHOX-202ENST00000381575 WDR66Q8TBY9 1149 aa17.62■□□□□ 0.41
SHOX-202ENST00000381575 CLUAP1Q96AJ1 413 aa17.62■□□□□ 0.41
SHOX-202ENST00000381575 PTPN18Q99952 460 aa17.62■□□□□ 0.41
SHOX-202ENST00000381575 DAGLAQ9Y4D2 1042 aa17.62■□□□□ 0.41
SHOX-202ENST00000381575 ALDH1A1P00352 501 aa17.61■□□□□ 0.41
SHOX-202ENST00000381575 TRIM27P14373 513 aa17.61■□□□□ 0.41
SHOX-202ENST00000381575 IL15P40933 162 aaPredicted RBP17.61■□□□□ 0.41
SHOX-202ENST00000381575 CRHR2Q13324 411 aa17.61■□□□□ 0.41
SHOX-202ENST00000381575 INTS3Q68E01 1043 aaKnown RBP17.61■□□□□ 0.41
SHOX-202ENST00000381575 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.61■□□□□ 0.41
SHOX-202ENST00000381575 OTUD5Q96G74 571 aa17.61■□□□□ 0.41
SHOX-202ENST00000381575 CFHR5Q9BXR6 569 aa17.61■□□□□ 0.41
SHOX-202ENST00000381575 SUGT1Q9Y2Z0 365 aa17.61■□□□□ 0.41
SHOX-202ENST00000381575 KIAA0100Q14667 2235 aaKnown RBP17.6■□□□□ 0.41
SHOX-202ENST00000381575 ZSWIM8A7E2V4 1837 aa17.6■□□□□ 0.41
SHOX-202ENST00000381575 UNCXA6NJT0 531 aa17.6■□□□□ 0.41
SHOX-202ENST00000381575 SRGAP3O43295 1099 aa17.6■□□□□ 0.41
SHOX-202ENST00000381575 INHBEP58166 350 aa17.6■□□□□ 0.41
SHOX-202ENST00000381575 MAP3K9P80192 1104 aa17.6■□□□□ 0.41
SHOX-202ENST00000381575 NOM1Q5C9Z4 860 aaKnown RBP17.6■□□□□ 0.41
SHOX-202ENST00000381575 HHIPL2Q6UWX4 724 aa17.6■□□□□ 0.41
SHOX-202ENST00000381575 WRNIP1Q96S55 665 aa17.6■□□□□ 0.41
SHOX-202ENST00000381575 COPRSQ9NQ92 184 aa17.6■□□□□ 0.41
SHOX-202ENST00000381575 FBXO3Q9UK99 471 aa17.6■□□□□ 0.41
SHOX-202ENST00000381575 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.6■□□□□ 0.41
SHOX-202ENST00000381575 TIMM10P62072 90 aa17.59■□□□□ 0.41
SHOX-202ENST00000381575 TCP10Q12799 353 aa17.59■□□□□ 0.41
SHOX-202ENST00000381575 MIGA2Q7L4E1 593 aa17.59■□□□□ 0.41
SHOX-202ENST00000381575 BRI3BPQ8WY22 251 aa17.59■□□□□ 0.41
SHOX-202ENST00000381575 ARHGAP45Q92619 1136 aa17.59■□□□□ 0.41
SHOX-202ENST00000381575 ZKSCAN4Q969J2 545 aaPredicted RBP17.59■□□□□ 0.41
SHOX-202ENST00000381575 MS4A4AQ96JQ5 239 aa17.59■□□□□ 0.41
SHOX-202ENST00000381575 GNL3LQ9NVN8 582 aaKnown RBP17.59■□□□□ 0.41
SHOX-202ENST00000381575 CSADQ9Y600 493 aa17.59■□□□□ 0.41
SHOX-202ENST00000381575 DOCK2Q92608 1830 aa17.59■□□□□ 0.41
SHOX-202ENST00000381575 LDHBP07195 334 aaKnown RBP17.58■□□□□ 0.4
SHOX-202ENST00000381575 GNAI3P08754 354 aa17.58■□□□□ 0.4
SHOX-202ENST00000381575 TFCP2Q12800 502 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms