RNA–Protein interactions for RNA: ENST00000380751.9

SERF1B-202, Transcript of small EDRK-rich factor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1B, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-202ENST00000380751 UTYO14607 1347 aa21.97■■□□□ 1.11
SERF1B-202ENST00000380751 MROH5Q6ZUA9 1318 aa21.97■■□□□ 1.11
SERF1B-202ENST00000380751 TESPA1A2RU30 521 aaPredicted RBP21.96■■□□□ 1.11
SERF1B-202ENST00000380751 CRHR2Q13324 411 aa21.96■■□□□ 1.11
SERF1B-202ENST00000380751 PRPF38BQ5VTL8 546 aaKnown RBP21.96■■□□□ 1.11
SERF1B-202ENST00000380751 VPS37DQ86XT2 251 aa21.96■■□□□ 1.11
SERF1B-202ENST00000380751 OPTNQ96CV9 577 aa21.96■■□□□ 1.11
SERF1B-202ENST00000380751 CHAF1AQ13111 956 aaPredicted RBP21.95■■□□□ 1.1
SERF1B-202ENST00000380751 RABL6Q3YEC7 729 aaPredicted RBP21.95■■□□□ 1.1
SERF1B-202ENST00000380751 MRPL50Q8N5N7 158 aaKnown RBP21.95■■□□□ 1.1
SERF1B-202ENST00000380751 TMEM39BQ9GZU3 492 aa21.95■■□□□ 1.1
SERF1B-202ENST00000380751 ECM29Q5VYK3 1845 aa21.94■■□□□ 1.1
SERF1B-202ENST00000380751 METTL24Q5JXM2 366 aa21.94■■□□□ 1.1
SERF1B-202ENST00000380751 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.94■■□□□ 1.1
SERF1B-202ENST00000380751 ANKRD44Q8N8A2 993 aa21.94■■□□□ 1.1
SERF1B-202ENST00000380751 CD99L2Q8TCZ2 262 aa21.94■■□□□ 1.1
SERF1B-202ENST00000380751 CNKSR2Q8WXI2 1034 aa21.94■■□□□ 1.1
SERF1B-202ENST00000380751 FRAT2O75474 233 aaPredicted RBP21.93■■□□□ 1.1
SERF1B-202ENST00000380751 TNNI2P48788 182 aa21.93■■□□□ 1.1
SERF1B-202ENST00000380751 MAP3K9P80192 1104 aa21.93■■□□□ 1.1
SERF1B-202ENST00000380751 CAVIN4Q5BKX8 364 aa21.93■■□□□ 1.1
SERF1B-202ENST00000380751 KLHDC4Q8TBB5 520 aa21.93■■□□□ 1.1
SERF1B-202ENST00000380751 ERO1AQ96HE7 468 aa21.93■■□□□ 1.1
SERF1B-202ENST00000380751 MS4A4AQ96JQ5 239 aa21.93■■□□□ 1.1
SERF1B-202ENST00000380751 PTPN22Q9Y2R2 807 aa21.93■■□□□ 1.1
SERF1B-202ENST00000380751 ZNF521Q96K83 1311 aa21.92■■□□□ 1.1
SERF1B-202ENST00000380751 PDE8BO95263 885 aa21.92■■□□□ 1.1
SERF1B-202ENST00000380751 BCAMP50895 628 aa21.92■■□□□ 1.1
SERF1B-202ENST00000380751 SP3Q02447 781 aa21.92■■□□□ 1.1
SERF1B-202ENST00000380751 CACNB3P54284 484 aa21.91■■□□□ 1.1
SERF1B-202ENST00000380751 HDLBPQ00341 1268 aaKnown RBP21.91■■□□□ 1.1
SERF1B-202ENST00000380751 VGLL4Q14135 290 aa21.91■■□□□ 1.1
SERF1B-202ENST00000380751 VGLL2Q8N8G2 317 aa21.91■■□□□ 1.1
SERF1B-202ENST00000380751 EFCC1Q9HA90 598 aa21.91■■□□□ 1.1
SERF1B-202ENST00000380751 POTEFA5A3E0 1075 aa21.9■■□□□ 1.1
SERF1B-202ENST00000380751 CAP1Q01518 475 aa21.9■■□□□ 1.1
SERF1B-202ENST00000380751 INTS3Q68E01 1043 aaKnown RBP21.9■■□□□ 1.1
SERF1B-202ENST00000380751 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.9■■□□□ 1.1
SERF1B-202ENST00000380751 TBC1D22AQ8WUA7 517 aa21.9■■□□□ 1.1
SERF1B-202ENST00000380751 BRI3BPQ8WY22 251 aa21.89■■□□□ 1.09
SERF1B-202ENST00000380751 TEKT1Q969V4 418 aa21.89■■□□□ 1.09
SERF1B-202ENST00000380751 USP44Q9H0E7 712 aa21.89■■□□□ 1.09
SERF1B-202ENST00000380751 CCL15-CCL14A0A0B4J2E2 113 aa21.88■■□□□ 1.09
SERF1B-202ENST00000380751 ZEB1P37275 1124 aaPredicted RBP21.88■■□□□ 1.09
SERF1B-202ENST00000380751 CCL15Q16663 113 aa21.88■■□□□ 1.09
SERF1B-202ENST00000380751 SSH1Q8WYL5 1049 aa21.88■■□□□ 1.09
SERF1B-202ENST00000380751 MRIQ9BWK5 157 aa21.88■■□□□ 1.09
SERF1B-202ENST00000380751 CSADQ9Y600 493 aa21.88■■□□□ 1.09
SERF1B-202ENST00000380751 PTPRCP08575 1304 aa21.87■■□□□ 1.09
SERF1B-202ENST00000380751 GTF2A2P52657 109 aa21.87■■□□□ 1.09
SERF1B-202ENST00000380751 APOBEC3HQ6NTF7 200 aaKnown RBP21.87■■□□□ 1.09
SERF1B-202ENST00000380751 OTUD5Q96G74 571 aa21.87■■□□□ 1.09
SERF1B-202ENST00000380751 ZDHHC15Q96MV8 337 aa21.87■■□□□ 1.09
SERF1B-202ENST00000380751 IFIT1P09914 478 aaKnown RBP21.86■■□□□ 1.09
SERF1B-202ENST00000380751 FGFR2P21802 821 aa21.86■■□□□ 1.09
SERF1B-202ENST00000380751 FAM43AQ8N2R8 423 aa21.86■■□□□ 1.09
SERF1B-202ENST00000380751 ZFYVE28Q9HCC9 887 aa21.86■■□□□ 1.09
SERF1B-202ENST00000380751 TAF1CQ15572 869 aaPredicted RBP21.85■■□□□ 1.09
SERF1B-202ENST00000380751 PUM3Q15397 648 aaKnown RBP21.84■■□□□ 1.09
SERF1B-202ENST00000380751 FAM83AQ86UY5 434 aa21.84■■□□□ 1.09
SERF1B-202ENST00000380751 ZKSCAN4Q969J2 545 aaPredicted RBP21.84■■□□□ 1.09
SERF1B-202ENST00000380751 ARMC5Q96C12 935 aa21.84■■□□□ 1.09
SERF1B-202ENST00000380751 TMOD2Q9NZR1 351 aa21.84■■□□□ 1.09
SERF1B-202ENST00000380751 SNCAIPQ9Y6H5 919 aa21.84■■□□□ 1.09
SERF1B-202ENST00000380751 LAMB1P07942 1786 aa21.84■■□□□ 1.09
SERF1B-202ENST00000380751 SPDYE5A6NIY4 337 aa21.83■■□□□ 1.09
SERF1B-202ENST00000380751 E9PSI1 815 aa21.83■■□□□ 1.09
SERF1B-202ENST00000380751 EYA2O00167 538 aa21.83■■□□□ 1.09
SERF1B-202ENST00000380751 RFX5P48382 616 aaPredicted RBP21.83■■□□□ 1.09
SERF1B-202ENST00000380751 HHIPL2Q6UWX4 724 aa21.83■■□□□ 1.09
SERF1B-202ENST00000380751 WRNIP1Q96S55 665 aa21.83■■□□□ 1.09
SERF1B-202ENST00000380751 SUGT1Q9Y2Z0 365 aa21.83■■□□□ 1.09
SERF1B-202ENST00000380751 OTOFQ9HC10 1997 aa21.82■■□□□ 1.08
SERF1B-202ENST00000380751 EN2P19622 333 aaPredicted RBP21.82■■□□□ 1.08
SERF1B-202ENST00000380751 FKBP1CQ5VVH2 108 aa21.82■■□□□ 1.08
SERF1B-202ENST00000380751 ERO1BQ86YB8 467 aa21.82■■□□□ 1.08
SERF1B-202ENST00000380751 HTTP42858 3142 aa21.82■■□□□ 1.08
SERF1B-202ENST00000380751 IRF6O14896 467 aa21.81■■□□□ 1.08
SERF1B-202ENST00000380751 SLFN5Q08AF3 891 aa21.81■■□□□ 1.08
SERF1B-202ENST00000380751 ARHGEF6Q15052 776 aa21.81■■□□□ 1.08
SERF1B-202ENST00000380751 MIGA2Q7L4E1 593 aa21.81■■□□□ 1.08
SERF1B-202ENST00000380751 LPIN2Q92539 896 aa21.81■■□□□ 1.08
SERF1B-202ENST00000380751 MAST3O60307 1309 aa21.8■■□□□ 1.08
SERF1B-202ENST00000380751 KIF16BQ96L93 1317 aa21.8■■□□□ 1.08
SERF1B-202ENST00000380751 BTBD19C9JJ37 291 aa21.8■■□□□ 1.08
SERF1B-202ENST00000380751 CETPP11597 493 aa21.8■■□□□ 1.08
SERF1B-202ENST00000380751 SLC5A1P13866 664 aa21.8■■□□□ 1.08
SERF1B-202ENST00000380751 ATG9AQ7Z3C6 839 aa21.8■■□□□ 1.08
SERF1B-202ENST00000380751 WDR66Q8TBY9 1149 aa21.8■■□□□ 1.08
SERF1B-202ENST00000380751 HOOK2Q96ED9 719 aa21.8■■□□□ 1.08
SERF1B-202ENST00000380751 PTCH2Q9Y6C5 1203 aa21.8■■□□□ 1.08
SERF1B-202ENST00000380751 ARAP2Q8WZ64 1704 aa21.8■■□□□ 1.08
SERF1B-202ENST00000380751 CENPFP49454 3210 aa21.78■■□□□ 1.08
SERF1B-202ENST00000380751 TLR2O60603 784 aa21.78■■□□□ 1.08
SERF1B-202ENST00000380751 SNAPC2Q13487 334 aa21.78■■□□□ 1.08
SERF1B-202ENST00000380751 DCAF15Q66K64 600 aa21.78■■□□□ 1.08
SERF1B-202ENST00000380751 CDCA7LQ96GN5 454 aa21.78■■□□□ 1.08
SERF1B-202ENST00000380751 ZNF333Q96JL9 665 aa21.78■■□□□ 1.08
SERF1B-202ENST00000380751 TMEM106CQ9BVX2 250 aa21.78■■□□□ 1.08
SERF1B-202ENST00000380751 ZNF341Q9BYN7 854 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms