RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 MAP3K9P80192 1104 aa22.17■■□□□ 1.14
HMGN1-203ENST00000380748 MTFR1Q15390 333 aa22.17■■□□□ 1.14
HMGN1-203ENST00000380748 CSADQ9Y600 493 aa22.17■■□□□ 1.14
HMGN1-203ENST00000380748 DLL1O00548 723 aa22.16■■□□□ 1.14
HMGN1-203ENST00000380748 KIF22Q14807 665 aa22.16■■□□□ 1.14
HMGN1-203ENST00000380748 TTF2Q9UNY4 1162 aaKnown RBP22.16■■□□□ 1.14
HMGN1-203ENST00000380748 FAM205AQ6ZU69 1335 aa22.15■■□□□ 1.14
HMGN1-203ENST00000380748 BTBD19C9JJ37 291 aa22.15■■□□□ 1.14
HMGN1-203ENST00000380748 TSR2Q969E8 191 aaKnown RBP22.15■■□□□ 1.14
HMGN1-203ENST00000380748 MYH16Q9H6N6 1097 aa22.15■■□□□ 1.14
HMGN1-203ENST00000380748 SERPINA10Q9UK55 444 aa22.15■■□□□ 1.14
HMGN1-203ENST00000380748 SPDYE5A6NIY4 337 aa22.14■■□□□ 1.13
HMGN1-203ENST00000380748 IFIT5Q13325 482 aaKnown RBP22.14■■□□□ 1.13
HMGN1-203ENST00000380748 MFSD14BQ5SR56 506 aa22.14■■□□□ 1.13
HMGN1-203ENST00000380748 DZIP1LQ8IYY4 767 aaKnown RBP22.14■■□□□ 1.13
HMGN1-203ENST00000380748 SLC17A8Q8NDX2 589 aa22.14■■□□□ 1.13
HMGN1-203ENST00000380748 SNCAIPQ9Y6H5 919 aa22.14■■□□□ 1.13
HMGN1-203ENST00000380748 PLIN1O60240 522 aa22.13■■□□□ 1.13
HMGN1-203ENST00000380748 WDHD1O75717 1129 aaPredicted RBP22.13■■□□□ 1.13
HMGN1-203ENST00000380748 SLC4A2P04920 1241 aa22.13■■□□□ 1.13
HMGN1-203ENST00000380748 CETPP11597 493 aa22.13■■□□□ 1.13
HMGN1-203ENST00000380748 CHMP3Q9Y3E7 222 aa22.13■■□□□ 1.13
HMGN1-203ENST00000380748 LAMA3Q16787 3333 aa22.13■■□□□ 1.13
HMGN1-203ENST00000380748 CUL9Q8IWT3 2517 aa22.12■■□□□ 1.13
HMGN1-203ENST00000380748 GNRH1P01148 92 aa22.12■■□□□ 1.13
HMGN1-203ENST00000380748 CTGFP29279 349 aa22.12■■□□□ 1.13
HMGN1-203ENST00000380748 FOXO4P98177 505 aa22.12■■□□□ 1.13
HMGN1-203ENST00000380748 PRO3102Q9H379 93 aa22.12■■□□□ 1.13
HMGN1-203ENST00000380748 CRKP46108 304 aa22.11■■□□□ 1.13
HMGN1-203ENST00000380748 TNNI2P48788 182 aa22.11■■□□□ 1.13
HMGN1-203ENST00000380748 PRMT2P55345 433 aa22.11■■□□□ 1.13
HMGN1-203ENST00000380748 UBE2Q1Q7Z7E8 422 aa22.11■■□□□ 1.13
HMGN1-203ENST00000380748 LINS1Q8NG48 757 aa22.11■■□□□ 1.13
HMGN1-203ENST00000380748 TDRD7Q8NHU6 1098 aaKnown RBP22.11■■□□□ 1.13
HMGN1-203ENST00000380748 DNAAF4Q8WXU2 420 aa22.11■■□□□ 1.13
HMGN1-203ENST00000380748 ZNF594Q96JF6 807 aaPredicted RBP22.11■■□□□ 1.13
HMGN1-203ENST00000380748 ZCCHC17Q9NP64 241 aaKnown RBP22.11■■□□□ 1.13
HMGN1-203ENST00000380748 IRF6O14896 467 aa22.1■■□□□ 1.13
HMGN1-203ENST00000380748 FLIIQ13045 1269 aa22.1■■□□□ 1.13
HMGN1-203ENST00000380748 ERO1BQ86YB8 467 aa22.1■■□□□ 1.13
HMGN1-203ENST00000380748 GYG1P46976 350 aa22.09■■□□□ 1.13
HMGN1-203ENST00000380748 CACNB3P54284 484 aa22.09■■□□□ 1.13
HMGN1-203ENST00000380748 FKBP5Q13451 457 aaPredicted RBP22.09■■□□□ 1.13
HMGN1-203ENST00000380748 SNAPC2Q13487 334 aa22.09■■□□□ 1.13
HMGN1-203ENST00000380748 GRIK5Q16478 980 aa22.09■■□□□ 1.13
HMGN1-203ENST00000380748 TWISTNBQ3B726 338 aaPredicted RBP22.09■■□□□ 1.13
HMGN1-203ENST00000380748 ZKSCAN4Q969J2 545 aaPredicted RBP22.09■■□□□ 1.13
HMGN1-203ENST00000380748 TRIM47Q96LD4 638 aa22.09■■□□□ 1.13
HMGN1-203ENST00000380748 WRNIP1Q96S55 665 aa22.09■■□□□ 1.13
HMGN1-203ENST00000380748 SRRDQ9UH36 339 aa22.09■■□□□ 1.13
HMGN1-203ENST00000380748 CPA4Q9UI42 421 aa22.09■■□□□ 1.13
HMGN1-203ENST00000380748 PSMC4P43686 418 aa22.08■■□□□ 1.13
HMGN1-203ENST00000380748 GJA8P48165 433 aa22.08■■□□□ 1.13
HMGN1-203ENST00000380748 C17orf99Q6UX52 265 aa22.08■■□□□ 1.13
HMGN1-203ENST00000380748 NKX2-3Q8TAU0 364 aa22.08■■□□□ 1.13
HMGN1-203ENST00000380748 HTATIP2Q9BUP3 242 aa22.08■■□□□ 1.13
HMGN1-203ENST00000380748 CCL5P13501 91 aa22.07■■□□□ 1.12
HMGN1-203ENST00000380748 OSBPP22059 807 aa22.07■■□□□ 1.12
HMGN1-203ENST00000380748 GRK4P32298 578 aa22.07■■□□□ 1.12
HMGN1-203ENST00000380748 DDX10Q13206 875 aaKnown RBP22.07■■□□□ 1.12
HMGN1-203ENST00000380748 PPIL2Q13356 520 aa22.07■■□□□ 1.12
HMGN1-203ENST00000380748 EPHA10Q5JZY3 1008 aa22.07■■□□□ 1.12
HMGN1-203ENST00000380748 LMBR1LQ6UX01 489 aa22.07■■□□□ 1.12
HMGN1-203ENST00000380748 LDHAL6AQ6ZMR3 332 aa22.07■■□□□ 1.12
HMGN1-203ENST00000380748 RAET1EQ8TD07 263 aa22.07■■□□□ 1.12
HMGN1-203ENST00000380748 RIPOR2Q9Y4F9 1068 aa22.07■■□□□ 1.12
HMGN1-203ENST00000380748 GJB1P08034 283 aa22.06■■□□□ 1.12
HMGN1-203ENST00000380748 HIBADHP31937 336 aaKnown RBP22.06■■□□□ 1.12
HMGN1-203ENST00000380748 TAF7LQ5H9L4 462 aa22.06■■□□□ 1.12
HMGN1-203ENST00000380748 CNNM1Q9NRU3 951 aa22.06■■□□□ 1.12
HMGN1-203ENST00000380748 ZBTB7BO15156 539 aaPredicted RBP22.05■■□□□ 1.12
HMGN1-203ENST00000380748 CCDC57Q2TAC2 916 aa22.05■■□□□ 1.12
HMGN1-203ENST00000380748 FAM84BQ96KN1 310 aaPredicted RBP22.05■■□□□ 1.12
HMGN1-203ENST00000380748 RNF208Q9H0X6 261 aa22.05■■□□□ 1.12
HMGN1-203ENST00000380748 MYPNQ86TC9 1320 aa22.05■■□□□ 1.12
HMGN1-203ENST00000380748 ADGRA2Q96PE1 1338 aa22.05■■□□□ 1.12
HMGN1-203ENST00000380748 SOX1O00570 391 aaPredicted RBP22.04■■□□□ 1.12
HMGN1-203ENST00000380748 FMNL1O95466 1100 aaPredicted RBP22.04■■□□□ 1.12
HMGN1-203ENST00000380748 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.04■■□□□ 1.12
HMGN1-203ENST00000380748 NR2E3Q9Y5X4 410 aa22.04■■□□□ 1.12
HMGN1-203ENST00000380748 HOXD10P28358 340 aa22.03■■□□□ 1.12
HMGN1-203ENST00000380748 UBE4AQ14139 1066 aa22.03■■□□□ 1.12
HMGN1-203ENST00000380748 IQSEC3Q9UPP2 1182 aaPredicted RBP22.03■■□□□ 1.12
HMGN1-203ENST00000380748 PDHXO00330 501 aa22.02■■□□□ 1.12
HMGN1-203ENST00000380748 FARP2O94887 1054 aaPredicted RBP22.02■■□□□ 1.12
HMGN1-203ENST00000380748 LRCH3Q96II8 777 aa22.02■■□□□ 1.12
HMGN1-203ENST00000380748 BIN2Q9UBW5 565 aaPredicted RBP22.02■■□□□ 1.12
HMGN1-203ENST00000380748 PRKCZQ05513 592 aa22.01■■□□□ 1.11
HMGN1-203ENST00000380748 PPATQ06203 517 aa22.01■■□□□ 1.11
HMGN1-203ENST00000380748 CHAF1AQ13111 956 aaPredicted RBP22.01■■□□□ 1.11
HMGN1-203ENST00000380748 ANKRD23Q86SG2 305 aa22.01■■□□□ 1.11
HMGN1-203ENST00000380748 U2AF1L4Q8WU68 220 aaKnown RBP22.01■■□□□ 1.11
HMGN1-203ENST00000380748 F6X3S4 739 aa22■■□□□ 1.11
HMGN1-203ENST00000380748 INPP5BP32019 993 aa22■■□□□ 1.11
HMGN1-203ENST00000380748 BEND3Q5T5X7 828 aa22■■□□□ 1.11
HMGN1-203ENST00000380748 FAM83AQ86UY5 434 aa22■■□□□ 1.11
HMGN1-203ENST00000380748 TEKT1Q969V4 418 aa22■■□□□ 1.11
HMGN1-203ENST00000380748 PUS3Q9BZE2 481 aaKnown RBP22■■□□□ 1.11
HMGN1-203ENST00000380748 UNC93B1Q9H1C4 597 aa22■■□□□ 1.11
HMGN1-203ENST00000380748 UBXN2AP68543 259 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms