RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 MANSC4A6NHS7 340 aaPredicted RBP21.15■□□□□ 0.98
SMN2-201ENST00000380741 UNCXA6NJT0 531 aa21.15■□□□□ 0.98
SMN2-201ENST00000380741 USP2O75604 605 aaPredicted RBP21.15■□□□□ 0.98
SMN2-201ENST00000380741 SOX10P56693 466 aa21.15■□□□□ 0.98
SMN2-201ENST00000380741 FRAT2O75474 233 aaPredicted RBP21.14■□□□□ 0.97
SMN2-201ENST00000380741 BCAMP50895 628 aa21.14■□□□□ 0.97
SMN2-201ENST00000380741 IFNL1Q8IU54 200 aa21.14■□□□□ 0.97
SMN2-201ENST00000380741 CDAN1Q8IWY9 1227 aa21.14■□□□□ 0.97
SMN2-201ENST00000380741 TBC1D22AQ8WUA7 517 aa21.14■□□□□ 0.97
SMN2-201ENST00000380741 HPS5Q9UPZ3 1129 aa21.14■□□□□ 0.97
SMN2-201ENST00000380741 TCP10L2B9ZVM9 353 aa21.13■□□□□ 0.97
SMN2-201ENST00000380741 ALDH1A1P00352 501 aa21.13■□□□□ 0.97
SMN2-201ENST00000380741 RFX5P48382 616 aaPredicted RBP21.13■□□□□ 0.97
SMN2-201ENST00000380741 INHBEP58166 350 aa21.13■□□□□ 0.97
SMN2-201ENST00000380741 PUM3Q15397 648 aaKnown RBP21.13■□□□□ 0.97
SMN2-201ENST00000380741 PKN2Q16513 984 aaKnown RBP21.13■□□□□ 0.97
SMN2-201ENST00000380741 ANKRD13AQ8IZ07 590 aa21.13■□□□□ 0.97
SMN2-201ENST00000380741 TRMT2AQ8IZ69 625 aaKnown RBP21.13■□□□□ 0.97
SMN2-201ENST00000380741 TEPSINQ96N21 525 aa21.13■□□□□ 0.97
SMN2-201ENST00000380741 IGF2BP3O00425 579 aaKnown RBP eCLIP21.12■□□□□ 0.97
SMN2-201ENST00000380741 FKTNO75072 461 aa21.12■□□□□ 0.97
SMN2-201ENST00000380741 FGFR2P21802 821 aa21.12■□□□□ 0.97
SMN2-201ENST00000380741 GJA5P36382 358 aa21.12■□□□□ 0.97
SMN2-201ENST00000380741 TMEM39BQ9GZU3 492 aa21.12■□□□□ 0.97
SMN2-201ENST00000380741 HTTP42858 3142 aa21.11■□□□□ 0.97
SMN2-201ENST00000380741 KIF16BQ96L93 1317 aa21.11■□□□□ 0.97
SMN2-201ENST00000380741 EYA2O00167 538 aa21.11■□□□□ 0.97
SMN2-201ENST00000380741 HDLBPQ00341 1268 aaKnown RBP21.11■□□□□ 0.97
SMN2-201ENST00000380741 TEKT1Q969V4 418 aa21.11■□□□□ 0.97
SMN2-201ENST00000380741 IFIT1P09914 478 aaKnown RBP21.1■□□□□ 0.97
SMN2-201ENST00000380741 TNNI2P48788 182 aa21.1■□□□□ 0.97
SMN2-201ENST00000380741 ELP3Q9H9T3 547 aa21.1■□□□□ 0.97
SMN2-201ENST00000380741 PDE4DIPQ5VU43 2346 aa21.1■□□□□ 0.97
SMN2-201ENST00000380741 CACNB3P54284 484 aa21.09■□□□□ 0.97
SMN2-201ENST00000380741 CENPFP49454 3210 aa21.09■□□□□ 0.97
SMN2-201ENST00000380741 CT47B1P0C2W7 299 aaPredicted RBP21.08■□□□□ 0.97
SMN2-201ENST00000380741 UBTFL1P0CB47 393 aaPredicted RBP21.08■□□□□ 0.97
SMN2-201ENST00000380741 SLC5A1P13866 664 aa21.08■□□□□ 0.97
SMN2-201ENST00000380741 FBXO46Q6PJ61 603 aaPredicted RBP21.08■□□□□ 0.97
SMN2-201ENST00000380741 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.08■□□□□ 0.97
SMN2-201ENST00000380741 ATG9AQ7Z3C6 839 aa21.08■□□□□ 0.97
SMN2-201ENST00000380741 LPIN2Q92539 896 aa21.08■□□□□ 0.97
SMN2-201ENST00000380741 OPTNQ96CV9 577 aa21.08■□□□□ 0.97
SMN2-201ENST00000380741 ZDHHC15Q96MV8 337 aa21.08■□□□□ 0.97
SMN2-201ENST00000380741 NOB1Q9ULX3 412 aaKnown RBP21.08■□□□□ 0.97
SMN2-201ENST00000380741 SIL1Q9H173 461 aa21.07■□□□□ 0.96
SMN2-201ENST00000380741 SUGT1Q9Y2Z0 365 aa21.07■□□□□ 0.96
SMN2-201ENST00000380741 MAST3O60307 1309 aa21.06■□□□□ 0.96
SMN2-201ENST00000380741 VGLL4Q14135 290 aa21.06■□□□□ 0.96
SMN2-201ENST00000380741 APOBEC3HQ6NTF7 200 aaKnown RBP21.06■□□□□ 0.96
SMN2-201ENST00000380741 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.06■□□□□ 0.96
SMN2-201ENST00000380741 CNKSR2Q8WXI2 1034 aa21.06■□□□□ 0.96
SMN2-201ENST00000380741 PTPN18Q99952 460 aa21.06■□□□□ 0.96
SMN2-201ENST00000380741 MRIQ9BWK5 157 aa21.06■□□□□ 0.96
SMN2-201ENST00000380741 TESPA1A2RU30 521 aaPredicted RBP21.05■□□□□ 0.96
SMN2-201ENST00000380741 CRHR2Q13324 411 aa21.05■□□□□ 0.96
SMN2-201ENST00000380741 OTUD7BQ6GQQ9 843 aa21.05■□□□□ 0.96
SMN2-201ENST00000380741 API5Q9BZZ5 524 aaKnown RBP21.05■□□□□ 0.96
SMN2-201ENST00000380741 TMOD2Q9NZR1 351 aa21.05■□□□□ 0.96
SMN2-201ENST00000380741 LRRFIP2Q9Y608 721 aaKnown RBP21.05■□□□□ 0.96
SMN2-201ENST00000380741 MAP3K9P80192 1104 aa21.04■□□□□ 0.96
SMN2-201ENST00000380741 HHIPL2Q6UWX4 724 aa21.04■□□□□ 0.96
SMN2-201ENST00000380741 WDR66Q8TBY9 1149 aa21.04■□□□□ 0.96
SMN2-201ENST00000380741 MS4A4AQ96JQ5 239 aa21.04■□□□□ 0.96
SMN2-201ENST00000380741 FBXO3Q9UK99 471 aa21.04■□□□□ 0.96
SMN2-201ENST00000380741 CIAO1O76071 339 aa21.03■□□□□ 0.96
SMN2-201ENST00000380741 ATP2B3Q16720 1220 aa21.03■□□□□ 0.96
SMN2-201ENST00000380741 FKBP1CQ5VVH2 108 aa21.03■□□□□ 0.96
SMN2-201ENST00000380741 FAM83AQ86UY5 434 aa21.03■□□□□ 0.96
SMN2-201ENST00000380741 TRIM17Q9Y577 477 aa21.03■□□□□ 0.96
SMN2-201ENST00000380741 CSADQ9Y600 493 aa21.03■□□□□ 0.96
SMN2-201ENST00000380741 CCER2I3L3R5 266 aa21.02■□□□□ 0.96
SMN2-201ENST00000380741 OTOP1Q7RTM1 612 aa21.02■□□□□ 0.96
SMN2-201ENST00000380741 MEIS3Q99687 375 aa21.02■□□□□ 0.96
SMN2-201ENST00000380741 CEP126Q9P2H0 1117 aa21.02■□□□□ 0.96
SMN2-201ENST00000380741 PA2G4Q9UQ80 394 aaKnown RBP21.02■□□□□ 0.96
SMN2-201ENST00000380741 BRCA2P51587 3418 aa21.02■□□□□ 0.96
SMN2-201ENST00000380741 RPAP1Q9BWH6 1393 aaPredicted RBP21.01■□□□□ 0.95
SMN2-201ENST00000380741 RARSP54136 660 aaKnown RBP21.01■□□□□ 0.95
SMN2-201ENST00000380741 BRI3BPQ8WY22 251 aa21.01■□□□□ 0.95
SMN2-201ENST00000380741 OTUD5Q96G74 571 aa21.01■□□□□ 0.95
SMN2-201ENST00000380741 CCL15-CCL14A0A0B4J2E2 113 aa21■□□□□ 0.95
SMN2-201ENST00000380741 IL15P40933 162 aaPredicted RBP21■□□□□ 0.95
SMN2-201ENST00000380741 GTF2A2P52657 109 aa21■□□□□ 0.95
SMN2-201ENST00000380741 DIXDC1Q155Q3 683 aa21■□□□□ 0.95
SMN2-201ENST00000380741 CCL15Q16663 113 aa21■□□□□ 0.95
SMN2-201ENST00000380741 CD99L2Q8TCZ2 262 aa21■□□□□ 0.95
SMN2-201ENST00000380741 ERO1AQ96HE7 468 aa21■□□□□ 0.95
SMN2-201ENST00000380741 WRNIP1Q96S55 665 aa21■□□□□ 0.95
SMN2-201ENST00000380741 HDAC5Q9UQL6 1122 aa21■□□□□ 0.95
SMN2-201ENST00000380741 DAGLAQ9Y4D2 1042 aa21■□□□□ 0.95
SMN2-201ENST00000380741 SNCAIPQ9Y6H5 919 aa21■□□□□ 0.95
SMN2-201ENST00000380741 SPDYE5A6NIY4 337 aa20.99■□□□□ 0.95
SMN2-201ENST00000380741 PRDX5P30044 214 aa20.99■□□□□ 0.95
SMN2-201ENST00000380741 COPRSQ9NQ92 184 aa20.99■□□□□ 0.95
SMN2-201ENST00000380741 GNL3LQ9NVN8 582 aaKnown RBP20.99■□□□□ 0.95
SMN2-201ENST00000380741 AK9Q5TCS8 1911 aa20.99■□□□□ 0.95
SMN2-201ENST00000380741 MKI67P46013 3256 aaKnown RBP20.98■□□□□ 0.95
SMN2-201ENST00000380741 PHKA1P46020 1223 aa20.98■□□□□ 0.95
SMN2-201ENST00000380741 SP3Q02447 781 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms