RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 SPDYE2BA6NHP3 402 aa5.85□□□□□ -1.47
C9orf72-203ENST00000380003 ALDH1L1O75891 902 aa5.85□□□□□ -1.47
C9orf72-203ENST00000380003 UBTFL1P0CB47 393 aaPredicted RBP5.85□□□□□ -1.47
C9orf72-203ENST00000380003 SPDYE6P0CI01 402 aa5.85□□□□□ -1.47
C9orf72-203ENST00000380003 TRIM27P14373 513 aa5.85□□□□□ -1.47
C9orf72-203ENST00000380003 CAP1Q01518 475 aa5.85□□□□□ -1.47
C9orf72-203ENST00000380003 MUC3AQ02505 3323 aa5.85□□□□□ -1.47
C9orf72-203ENST00000380003 POLA2Q14181 598 aa5.85□□□□□ -1.47
C9orf72-203ENST00000380003 TBC1D9Q6ZT07 1266 aa5.85□□□□□ -1.47
C9orf72-203ENST00000380003 ZKSCAN4Q969J2 545 aaPredicted RBP5.85□□□□□ -1.47
C9orf72-203ENST00000380003 TRPM7Q96QT4 1865 aa5.84□□□□□ -1.47
C9orf72-203ENST00000380003 APBB1O00213 710 aa5.84□□□□□ -1.47
C9orf72-203ENST00000380003 SRGAP3O43295 1099 aa5.84□□□□□ -1.47
C9orf72-203ENST00000380003 IL1R1P14778 569 aa5.84□□□□□ -1.47
C9orf72-203ENST00000380003 PHKA1P46020 1223 aa5.84□□□□□ -1.47
C9orf72-203ENST00000380003 BRPF1P55201 1214 aaPredicted RBP5.84□□□□□ -1.47
C9orf72-203ENST00000380003 ATG9AQ7Z3C6 839 aa5.84□□□□□ -1.47
C9orf72-203ENST00000380003 DZIP1LQ8IYY4 767 aaKnown RBP5.84□□□□□ -1.47
C9orf72-203ENST00000380003 VGLL2Q8N8G2 317 aa5.84□□□□□ -1.47
C9orf72-203ENST00000380003 ELP3Q9H9T3 547 aa5.84□□□□□ -1.47
C9orf72-203ENST00000380003 ABCF2Q9UG63 623 aa5.84□□□□□ -1.47
C9orf72-203ENST00000380003 HDAC9Q9UKV0 1011 aa5.84□□□□□ -1.47
C9orf72-203ENST00000380003 XIRP2A4UGR9 3374 aa5.84□□□□□ -1.47
C9orf72-203ENST00000380003 PNMA6EA0A0J9YXQ4 647 aa5.84□□□□□ -1.47
C9orf72-203ENST00000380003 RFX5P48382 616 aaPredicted RBP5.84□□□□□ -1.47
C9orf72-203ENST00000380003 NFIAQ12857 509 aa5.84□□□□□ -1.47
C9orf72-203ENST00000380003 ZFPM1Q8IX07 1006 aa5.84□□□□□ -1.47
C9orf72-203ENST00000380003 TDRD7Q8NHU6 1098 aaKnown RBP5.84□□□□□ -1.47
C9orf72-203ENST00000380003 ZNF296Q8WUU4 475 aaPredicted RBP5.84□□□□□ -1.47
C9orf72-203ENST00000380003 NEUROD6Q96NK8 337 aa5.84□□□□□ -1.47
C9orf72-203ENST00000380003 PCDH10Q9P2E7 1040 aa5.84□□□□□ -1.47
C9orf72-203ENST00000380003 SLC10A3P09131 477 aa5.84□□□□□ -1.48
C9orf72-203ENST00000380003 RLBP1P12271 317 aa5.84□□□□□ -1.48
C9orf72-203ENST00000380003 GJA5P36382 358 aa5.84□□□□□ -1.48
C9orf72-203ENST00000380003 CRKP46108 304 aa5.84□□□□□ -1.48
C9orf72-203ENST00000380003 RABL6Q3YEC7 729 aaPredicted RBP5.84□□□□□ -1.48
C9orf72-203ENST00000380003 CCDC84Q86UT8 332 aaPredicted RBP5.84□□□□□ -1.48
C9orf72-203ENST00000380003 PRDM10Q9NQV6 1147 aa5.84□□□□□ -1.48
C9orf72-203ENST00000380003 FAM196BA6NMK8 535 aa5.83□□□□□ -1.48
C9orf72-203ENST00000380003 MYCNP04198 464 aaPredicted RBP5.83□□□□□ -1.48
C9orf72-203ENST00000380003 CAVIN4Q5BKX8 364 aa5.83□□□□□ -1.48
C9orf72-203ENST00000380003 TRMT2AQ8IZ69 625 aaKnown RBP5.83□□□□□ -1.48
C9orf72-203ENST00000380003 SLC10A4Q96EP9 437 aa5.83□□□□□ -1.48
C9orf72-203ENST00000380003 SNRKQ9NRH2 765 aa5.83□□□□□ -1.48
C9orf72-203ENST00000380003 ZNF70Q9UC06 446 aaPredicted RBP5.83□□□□□ -1.48
C9orf72-203ENST00000380003 PTPRCP08575 1304 aa5.83□□□□□ -1.48
C9orf72-203ENST00000380003 SSC5DA1L4H1 1573 aa5.83□□□□□ -1.48
C9orf72-203ENST00000380003 EYA2O00167 538 aa5.83□□□□□ -1.48
C9orf72-203ENST00000380003 IGF2BP3O00425 579 aaKnown RBP eCLIP5.83□□□□□ -1.48
C9orf72-203ENST00000380003 MYO1BO43795 1136 aa5.83□□□□□ -1.48
C9orf72-203ENST00000380003 TFCP2Q12800 502 aa5.83□□□□□ -1.48
C9orf72-203ENST00000380003 TMEM57Q8N5G2 664 aa5.83□□□□□ -1.48
C9orf72-203ENST00000380003 CCDC102AQ96A19 550 aa5.83□□□□□ -1.48
C9orf72-203ENST00000380003 OTUD5Q96G74 571 aa5.83□□□□□ -1.48
C9orf72-203ENST00000380003 USP2O75604 605 aaPredicted RBP5.82□□□□□ -1.48
C9orf72-203ENST00000380003 NF2P35240 595 aa5.82□□□□□ -1.48
C9orf72-203ENST00000380003 UBE4AQ14139 1066 aa5.82□□□□□ -1.48
C9orf72-203ENST00000380003 FBXO33Q7Z6M2 555 aa5.82□□□□□ -1.48
C9orf72-203ENST00000380003 PANK1Q8TE04 598 aa5.82□□□□□ -1.48
C9orf72-203ENST00000380003 ZBED3Q96IU2 234 aaPredicted RBP5.82□□□□□ -1.48
C9orf72-203ENST00000380003 PTPN18Q99952 460 aa5.82□□□□□ -1.48
C9orf72-203ENST00000380003 UTYO14607 1347 aa5.82□□□□□ -1.48
C9orf72-203ENST00000380003 MROH5Q6ZUA9 1318 aa5.82□□□□□ -1.48
C9orf72-203ENST00000380003 COL1A1P02452 1464 aaPredicted RBP5.82□□□□□ -1.48
C9orf72-203ENST00000380003 PICALMQ13492 652 aa5.82□□□□□ -1.48
C9orf72-203ENST00000380003 PUM3Q15397 648 aaKnown RBP5.82□□□□□ -1.48
C9orf72-203ENST00000380003 APOBEC3HQ6NTF7 200 aaKnown RBP5.82□□□□□ -1.48
C9orf72-203ENST00000380003 MYO3BQ8WXR4 1341 aa5.82□□□□□ -1.48
C9orf72-203ENST00000380003 INPP5BP32019 993 aa5.82□□□□□ -1.48
C9orf72-203ENST00000380003 ATP2B3Q16720 1220 aa5.82□□□□□ -1.48
C9orf72-203ENST00000380003 OPTNQ96CV9 577 aa5.82□□□□□ -1.48
C9orf72-203ENST00000380003 TEPSINQ96N21 525 aa5.82□□□□□ -1.48
C9orf72-203ENST00000380003 PPP1R12BO60237 982 aaPredicted RBP5.81□□□□□ -1.48
C9orf72-203ENST00000380003 IFIT1P09914 478 aaKnown RBP5.81□□□□□ -1.48
C9orf72-203ENST00000380003 RASGRF1Q13972 1273 aa5.81□□□□□ -1.48
C9orf72-203ENST00000380003 VGLL4Q14135 290 aa5.81□□□□□ -1.48
C9orf72-203ENST00000380003 SPRYD7Q5W111 196 aa5.81□□□□□ -1.48
C9orf72-203ENST00000380003 CCDC102BQ68D86 513 aa5.81□□□□□ -1.48
C9orf72-203ENST00000380003 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.81□□□□□ -1.48
C9orf72-203ENST00000380003 ITPRIPQ8IWB1 547 aa5.81□□□□□ -1.48
C9orf72-203ENST00000380003 CEP126Q9P2H0 1117 aa5.81□□□□□ -1.48
C9orf72-203ENST00000380003 A0A1B0GUL7 405 aa5.81□□□□□ -1.48
C9orf72-203ENST00000380003 FGFR2P21802 821 aa5.81□□□□□ -1.48
C9orf72-203ENST00000380003 ALDH1L2Q3SY69 923 aa5.81□□□□□ -1.48
C9orf72-203ENST00000380003 ARMC9Q7Z3E5 817 aa5.81□□□□□ -1.48
C9orf72-203ENST00000380003 APOBEC3FQ8IUX4 373 aaKnown RBP5.81□□□□□ -1.48
C9orf72-203ENST00000380003 HHIPL1Q96JK4 782 aa5.81□□□□□ -1.48
C9orf72-203ENST00000380003 YTHDC1Q96MU7 727 aaKnown RBP5.81□□□□□ -1.48
C9orf72-203ENST00000380003 WRNIP1Q96S55 665 aa5.81□□□□□ -1.48
C9orf72-203ENST00000380003 IRF6O14896 467 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 PEX10O60683 326 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 CRHR2Q13324 411 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 SPDYE2Q495Y8 402 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 ATF7IPQ6VMQ6 1270 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 ZSCAN29Q8IWY8 852 aaPredicted RBP5.8□□□□□ -1.48
C9orf72-203ENST00000380003 TEKT1Q969V4 418 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 ARHGAP39Q9C0H5 1083 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 TLR7Q9NYK1 1049 aaKnown RBP5.8□□□□□ -1.48
C9orf72-203ENST00000380003 PITPNM2Q9BZ72 1349 aa5.8□□□□□ -1.48
C9orf72-203ENST00000380003 ZNF646O15015 1829 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms