RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 V9GY48 417 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-203ENST00000378169 STAT6P42226 847 aa15.1■□□□□ 0.01
NPHP4-203ENST00000378169 GAS2L3Q86XJ1 694 aa15.1■□□□□ 0.01
NPHP4-203ENST00000378169 ZNF397Q8NF99 534 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-203ENST00000378169 CARD10Q9BWT7 1032 aa15.1■□□□□ 0.01
NPHP4-203ENST00000378169 PTCH1Q13635 1447 aa15.1■□□□□ 0.01
NPHP4-203ENST00000378169 KIF5CO60282 957 aa15.09■□□□□ 0.01
NPHP4-203ENST00000378169 HMGB2P26583 209 aaKnown RBP15.09■□□□□ 0.01
NPHP4-203ENST00000378169 GNAQP50148 359 aa15.09■□□□□ 0.01
NPHP4-203ENST00000378169 FAM160A1Q05DH4 1040 aa15.09■□□□□ 0.01
NPHP4-203ENST00000378169 SNW1Q13573 536 aaKnown RBP15.09■□□□□ 0.01
NPHP4-203ENST00000378169 TDRD12Q587J7 1177 aaKnown RBP15.09■□□□□ 0.01
NPHP4-203ENST00000378169 CCDC178Q5BJE1 867 aa15.09■□□□□ 0.01
NPHP4-203ENST00000378169 DIS3L2Q8IYB7 885 aaKnown RBP15.09■□□□□ 0.01
NPHP4-203ENST00000378169 TMEM87BQ96K49 555 aa15.09■□□□□ 0.01
NPHP4-203ENST00000378169 FGAP02671 866 aa15.09■□□□□ 0.01
NPHP4-203ENST00000378169 GYG1P46976 350 aa15.09■□□□□ 0.01
NPHP4-203ENST00000378169 FAM182BQ5T319 152 aa15.09■□□□□ 0.01
NPHP4-203ENST00000378169 WDR17Q8IZU2 1322 aa15.09■□□□□ 0.01
NPHP4-203ENST00000378169 UFL1O94874 794 aa15.09■□□□□ 0.01
NPHP4-203ENST00000378169 BCAMP50895 628 aa15.09■□□□□ 0.01
NPHP4-203ENST00000378169 ZNF445P59923 1031 aa15.09■□□□□ 0.01
NPHP4-203ENST00000378169 MAP4K1Q92918 833 aa15.09■□□□□ 0.01
NPHP4-203ENST00000378169 DSCC1Q9BVC3 393 aa15.09■□□□□ 0.01
NPHP4-203ENST00000378169 IFNKQ9P0W0 207 aa15.09■□□□□ 0.01
NPHP4-203ENST00000378169 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.09■□□□□ 0.01
NPHP4-203ENST00000378169 PCCAP05165 728 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-203ENST00000378169 ADD1P35611 737 aaKnown RBP15.09■□□□□ 0.01
NPHP4-203ENST00000378169 TCERG1LQ5VWI1 586 aa15.09■□□□□ 0.01
NPHP4-203ENST00000378169 GTF3C6Q969F1 213 aa15.09■□□□□ 0.01
NPHP4-203ENST00000378169 LLPHQ9BRT6 129 aaKnown RBP15.09■□□□□ 0.01
NPHP4-203ENST00000378169 MTMR6Q9Y217 621 aa15.09■□□□□ 0.01
NPHP4-203ENST00000378169 ZNF335Q9H4Z2 1342 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-203ENST00000378169 TULP4Q9NRJ4 1543 aa15.09■□□□□ 0.01
NPHP4-203ENST00000378169 PHKA1P46020 1223 aa15.08■□□□□ 0.01
NPHP4-203ENST00000378169 PTPN12Q05209 780 aaKnown RBP15.08■□□□□ 0.01
NPHP4-203ENST00000378169 SPA17Q15506 151 aa15.08■□□□□ 0.01
NPHP4-203ENST00000378169 ZNF174Q15697 407 aa15.08■□□□□ 0.01
NPHP4-203ENST00000378169 ANO1Q5XXA6 986 aa15.08■□□□□ 0.01
NPHP4-203ENST00000378169 CUL5Q93034 780 aa15.08■□□□□ 0.01
NPHP4-203ENST00000378169 CEP152O94986 1710 aa15.08■□□□□ 0
NPHP4-203ENST00000378169 CYP21A2P08686 494 aa15.08■□□□□ 0
NPHP4-203ENST00000378169 GNG11P61952 73 aa15.08■□□□□ 0
NPHP4-203ENST00000378169 EPHA10Q5JZY3 1008 aa15.08■□□□□ 0
NPHP4-203ENST00000378169 CMTR1Q8N1G2 835 aaKnown RBP15.08■□□□□ 0
NPHP4-203ENST00000378169 CCDC148Q8NFR7 591 aa15.08■□□□□ 0
NPHP4-203ENST00000378169 ABCA9Q8IUA7 1624 aa15.08■□□□□ 0
NPHP4-203ENST00000378169 VWA3AA6NCI4 1184 aa15.08■□□□□ 0
NPHP4-203ENST00000378169 RRP9O43818 475 aaKnown RBP15.08■□□□□ 0
NPHP4-203ENST00000378169 GIGYF2Q6Y7W6 1299 aaKnown RBP15.08■□□□□ 0
NPHP4-203ENST00000378169 KCNJ14Q9UNX9 436 aa15.08■□□□□ 0
NPHP4-203ENST00000378169 ERBB4Q15303 1308 aa15.07■□□□□ 0
NPHP4-203ENST00000378169 LOC102724428A0A0B4J2F2 783 aa15.07■□□□□ 0
NPHP4-203ENST00000378169 BMP15O95972 392 aa15.07■□□□□ 0
NPHP4-203ENST00000378169 IGKV5-2P06315 115 aa15.07■□□□□ 0
NPHP4-203ENST00000378169 PDE6AP16499 860 aa15.07■□□□□ 0
NPHP4-203ENST00000378169 EIF6P56537 245 aaKnown RBP15.07■□□□□ 0
NPHP4-203ENST00000378169 SIK1P57059 783 aa15.07■□□□□ 0
NPHP4-203ENST00000378169 FAM193AP78312 1265 aa15.07■□□□□ 0
NPHP4-203ENST00000378169 CBX1P83916 185 aa15.07■□□□□ 0
NPHP4-203ENST00000378169 KRI1Q8N9T8 703 aaKnown RBP15.07■□□□□ 0
NPHP4-203ENST00000378169 CALM1P0DP23 149 aa15.07■□□□□ 0
NPHP4-203ENST00000378169 CALM2P0DP24 149 aa15.07■□□□□ 0
NPHP4-203ENST00000378169 CALM3P0DP25 149 aa15.07■□□□□ 0
NPHP4-203ENST00000378169 KRT2P35908 639 aa15.07■□□□□ 0
NPHP4-203ENST00000378169 TEX11Q8IYF3 940 aa15.07■□□□□ 0
NPHP4-203ENST00000378169 TSG101Q99816 390 aa15.07■□□□□ 0
NPHP4-203ENST00000378169 YEATS4O95619 227 aa15.07■□□□□ 0
NPHP4-203ENST00000378169 TNNI2P48788 182 aa15.07■□□□□ 0
NPHP4-203ENST00000378169 RPS8P62241 208 aaKnown RBP15.07■□□□□ 0
NPHP4-203ENST00000378169 AMPD3Q01432 767 aa15.07■□□□□ 0
NPHP4-203ENST00000378169 KRT40Q6A162 431 aa15.07■□□□□ 0
NPHP4-203ENST00000378169 SDR42E1Q8WUS8 393 aa15.07■□□□□ 0
NPHP4-203ENST00000378169 RTL9Q8NET4 1388 aa15.07■□□□□ 0
NPHP4-203ENST00000378169 MAP3K15Q6ZN16 1313 aa15.07■□□□□ 0
NPHP4-203ENST00000378169 LIG1P18858 919 aa15.06■□□□□ 0
NPHP4-203ENST00000378169 CEP135Q66GS9 1140 aa15.06■□□□□ 0
NPHP4-203ENST00000378169 C17orf53Q8N3J3 647 aaPredicted RBP15.06■□□□□ 0
NPHP4-203ENST00000378169 SSH2Q76I76 1423 aa15.06■□□□□ 0
NPHP4-203ENST00000378169 MROH5Q6ZUA9 1318 aa15.06■□□□□ 0
NPHP4-203ENST00000378169 CCDC40Q4G0X9 1142 aa15.06■□□□□ 0
NPHP4-203ENST00000378169 CASQ1P31415 396 aa15.06■□□□□ 0
NPHP4-203ENST00000378169 PI4K2BQ8TCG2 481 aa15.06■□□□□ 0
NPHP4-203ENST00000378169 GPT2Q8TD30 523 aa15.06■□□□□ 0
NPHP4-203ENST00000378169 ERLIN1O75477 346 aa15.06■□□□□ 0
NPHP4-203ENST00000378169 CALML3P27482 149 aa15.06■□□□□ 0
NPHP4-203ENST00000378169 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.06■□□□□ 0
NPHP4-203ENST00000378169 V9GYY5 206 aaPredicted RBP15.06■□□□□ 0
NPHP4-203ENST00000378169 PDE8BO95263 885 aa15.05■□□□□ 0
NPHP4-203ENST00000378169 ASIC1P78348 528 aa15.05■□□□□ 0
NPHP4-203ENST00000378169 WDR78Q5VTH9 848 aa15.05■□□□□ 0
NPHP4-203ENST00000378169 TMCO3Q6UWJ1 677 aa15.05■□□□□ 0
NPHP4-203ENST00000378169 BRINP3Q76B58 766 aa15.05■□□□□ 0
NPHP4-203ENST00000378169 POLA2Q14181 598 aa15.05■□□□□ -0
NPHP4-203ENST00000378169 TTC6Q86TZ1 520 aa15.05■□□□□ -0
NPHP4-203ENST00000378169 CCDC150Q8NCX0 1101 aa15.05■□□□□ -0
NPHP4-203ENST00000378169 USP28Q96RU2 1077 aa15.05■□□□□ -0
NPHP4-203ENST00000378169 DNAI1Q9UI46 699 aa15.05■□□□□ -0
NPHP4-203ENST00000378169 CPSF1Q10570 1443 aaKnown RBP15.05■□□□□ -0
NPHP4-203ENST00000378169 LRRC7Q96NW7 1537 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms