RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 TRPA1O75762 1119 aa22.29■■□□□ 1.16
COMMD6-202ENST00000377612 IFIT1P09914 478 aaKnown RBP22.29■■□□□ 1.16
COMMD6-202ENST00000377612 SLC5A1P13866 664 aa22.29■■□□□ 1.16
COMMD6-202ENST00000377612 MKRN3Q13064 507 aaKnown RBP22.29■■□□□ 1.16
COMMD6-202ENST00000377612 ATF7IPQ6VMQ6 1270 aa22.29■■□□□ 1.16
COMMD6-202ENST00000377612 DZIP1LQ8IYY4 767 aaKnown RBP22.29■■□□□ 1.16
COMMD6-202ENST00000377612 LPIN2Q92539 896 aa22.29■■□□□ 1.16
COMMD6-202ENST00000377612 ABHD8Q96I13 439 aa22.29■■□□□ 1.16
COMMD6-202ENST00000377612 MAST2Q6P0Q8 1798 aa22.28■■□□□ 1.16
COMMD6-202ENST00000377612 RASA3Q14644 834 aa22.28■■□□□ 1.16
COMMD6-202ENST00000377612 MAP3K11Q16584 847 aa22.28■■□□□ 1.16
COMMD6-202ENST00000377612 ATP2B3Q16720 1220 aa22.28■■□□□ 1.16
COMMD6-202ENST00000377612 ARMC9Q7Z3E5 817 aa22.28■■□□□ 1.16
COMMD6-202ENST00000377612 CLMNQ96JQ2 1002 aa22.28■■□□□ 1.16
COMMD6-202ENST00000377612 TEPSINQ96N21 525 aa22.28■■□□□ 1.16
COMMD6-202ENST00000377612 COPRSQ9NQ92 184 aa22.28■■□□□ 1.16
COMMD6-202ENST00000377612 FBXO3Q9UK99 471 aa22.28■■□□□ 1.16
COMMD6-202ENST00000377612 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.28■■□□□ 1.16
COMMD6-202ENST00000377612 TBC1D22AQ8WUA7 517 aa22.27■■□□□ 1.16
COMMD6-202ENST00000377612 FRAT1Q92837 279 aaPredicted RBP22.27■■□□□ 1.16
COMMD6-202ENST00000377612 CLUAP1Q96AJ1 413 aa22.27■■□□□ 1.16
COMMD6-202ENST00000377612 FRAT2O75474 233 aaPredicted RBP22.26■■□□□ 1.15
COMMD6-202ENST00000377612 ADORA1P30542 326 aa22.26■■□□□ 1.15
COMMD6-202ENST00000377612 MTX1Q13505 466 aa22.26■■□□□ 1.15
COMMD6-202ENST00000377612 IL15P40933 162 aaPredicted RBP22.25■■□□□ 1.15
COMMD6-202ENST00000377612 PHKA1P46020 1223 aa22.25■■□□□ 1.15
COMMD6-202ENST00000377612 CACNB3P54284 484 aa22.25■■□□□ 1.15
COMMD6-202ENST00000377612 TCP10L2B9ZVM9 353 aa22.24■■□□□ 1.15
COMMD6-202ENST00000377612 SRGAP3O43295 1099 aa22.24■■□□□ 1.15
COMMD6-202ENST00000377612 GNAI3P08754 354 aa22.24■■□□□ 1.15
COMMD6-202ENST00000377612 HDLBPQ00341 1268 aaKnown RBP22.24■■□□□ 1.15
COMMD6-202ENST00000377612 SPRYD7Q5W111 196 aa22.24■■□□□ 1.15
COMMD6-202ENST00000377612 TMEM57Q8N5G2 664 aa22.24■■□□□ 1.15
COMMD6-202ENST00000377612 MCOLN1Q9GZU1 580 aa22.24■■□□□ 1.15
COMMD6-202ENST00000377612 TMEM39BQ9GZU3 492 aa22.24■■□□□ 1.15
COMMD6-202ENST00000377612 CEP126Q9P2H0 1117 aa22.24■■□□□ 1.15
COMMD6-202ENST00000377612 PTPRFP10586 1907 aa22.23■■□□□ 1.15
COMMD6-202ENST00000377612 FOCADQ5VW36 1801 aa22.23■■□□□ 1.15
COMMD6-202ENST00000377612 TEKT1Q969V4 418 aa22.23■■□□□ 1.15
COMMD6-202ENST00000377612 ZDHHC15Q96MV8 337 aa22.23■■□□□ 1.15
COMMD6-202ENST00000377612 ZBED9Q6R2W3 1325 aa22.23■■□□□ 1.15
COMMD6-202ENST00000377612 ZSWIM8A7E2V4 1837 aa22.22■■□□□ 1.15
COMMD6-202ENST00000377612 PNMA6EA0A0J9YXQ4 647 aa22.22■■□□□ 1.15
COMMD6-202ENST00000377612 IPO8O15397 1037 aaKnown RBP22.22■■□□□ 1.15
COMMD6-202ENST00000377612 USP2O75604 605 aaPredicted RBP22.22■■□□□ 1.15
COMMD6-202ENST00000377612 GJA5P36382 358 aa22.22■■□□□ 1.15
COMMD6-202ENST00000377612 APOBEC3HQ6NTF7 200 aaKnown RBP22.22■■□□□ 1.15
COMMD6-202ENST00000377612 REM2Q8IYK8 340 aaPredicted RBP22.22■■□□□ 1.15
COMMD6-202ENST00000377612 WNK4Q96J92 1243 aa22.22■■□□□ 1.15
COMMD6-202ENST00000377612 PRDX5P30044 214 aa22.21■■□□□ 1.15
COMMD6-202ENST00000377612 TM4SF4P48230 202 aa22.21■■□□□ 1.15
COMMD6-202ENST00000377612 TNFAIP1Q13829 316 aa22.21■■□□□ 1.15
COMMD6-202ENST00000377612 SUPT20HL1Q3ZLR7 823 aa22.21■■□□□ 1.15
COMMD6-202ENST00000377612 ZKSCAN2Q63HK3 967 aa22.21■■□□□ 1.15
COMMD6-202ENST00000377612 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.21■■□□□ 1.15
COMMD6-202ENST00000377612 HDAC5Q9UQL6 1122 aa22.21■■□□□ 1.15
COMMD6-202ENST00000377612 SUGT1Q9Y2Z0 365 aa22.21■■□□□ 1.15
COMMD6-202ENST00000377612 PHIPQ8WWQ0 1821 aa22.21■■□□□ 1.15
COMMD6-202ENST00000377612 ATAD5Q96QE3 1844 aa22.21■■□□□ 1.15
COMMD6-202ENST00000377612 MAST3O60307 1309 aa22.21■■□□□ 1.15
COMMD6-202ENST00000377612 PPP1R12BO60237 982 aaPredicted RBP22.2■■□□□ 1.14
COMMD6-202ENST00000377612 RLBP1P12271 317 aa22.2■■□□□ 1.14
COMMD6-202ENST00000377612 DGKZQ13574 1117 aa22.2■■□□□ 1.14
COMMD6-202ENST00000377612 DIXDC1Q155Q3 683 aa22.2■■□□□ 1.14
COMMD6-202ENST00000377612 DAGLAQ9Y4D2 1042 aa22.2■■□□□ 1.14
COMMD6-202ENST00000377612 RPAP1Q9BWH6 1393 aaPredicted RBP22.2■■□□□ 1.14
COMMD6-202ENST00000377612 DOCK1Q14185 1865 aa22.2■■□□□ 1.14
COMMD6-202ENST00000377612 TBC1D8O95759 1140 aa22.19■■□□□ 1.14
COMMD6-202ENST00000377612 TFCP2Q12800 502 aa22.19■■□□□ 1.14
COMMD6-202ENST00000377612 CCDC102BQ68D86 513 aa22.19■■□□□ 1.14
COMMD6-202ENST00000377612 WDR66Q8TBY9 1149 aa22.19■■□□□ 1.14
COMMD6-202ENST00000377612 R3HDMLQ9H3Y0 253 aa22.19■■□□□ 1.14
COMMD6-202ENST00000377612 SALL1Q9NSC2 1324 aa22.19■■□□□ 1.14
COMMD6-202ENST00000377612 SIPA1L1O43166 1804 aa22.19■■□□□ 1.14
COMMD6-202ENST00000377612 GNAI2P04899 355 aa22.18■■□□□ 1.14
COMMD6-202ENST00000377612 TIMM10P62072 90 aa22.18■■□□□ 1.14
COMMD6-202ENST00000377612 RASGRF1Q13972 1273 aa22.18■■□□□ 1.14
COMMD6-202ENST00000377612 HHIPL2Q6UWX4 724 aa22.18■■□□□ 1.14
COMMD6-202ENST00000377612 MRIQ9BWK5 157 aa22.18■■□□□ 1.14
COMMD6-202ENST00000377612 RFX7Q2KHR2 1363 aa22.17■■□□□ 1.14
COMMD6-202ENST00000377612 A0A1B0GUL7 405 aa22.17■■□□□ 1.14
COMMD6-202ENST00000377612 ZBTB22O15209 634 aa22.17■■□□□ 1.14
COMMD6-202ENST00000377612 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.17■■□□□ 1.14
COMMD6-202ENST00000377612 C1orf115Q9H7X2 142 aa22.17■■□□□ 1.14
COMMD6-202ENST00000377612 IGF2BP3O00425 579 aaKnown RBP eCLIP22.16■■□□□ 1.14
COMMD6-202ENST00000377612 ZBTB48P10074 688 aaPredicted RBP22.16■■□□□ 1.14
COMMD6-202ENST00000377612 IREB2P48200 963 aaKnown RBP22.16■■□□□ 1.14
COMMD6-202ENST00000377612 SREBF2Q12772 1141 aa22.16■■□□□ 1.14
COMMD6-202ENST00000377612 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.16■■□□□ 1.14
COMMD6-202ENST00000377612 CNKSR2Q8WXI2 1034 aa22.16■■□□□ 1.14
COMMD6-202ENST00000377612 SLC10A4Q96EP9 437 aa22.16■■□□□ 1.14
COMMD6-202ENST00000377612 XAGE2Q96GT9 111 aa22.16■■□□□ 1.14
COMMD6-202ENST00000377612 HTTP42858 3142 aa22.15■■□□□ 1.14
COMMD6-202ENST00000377612 SEMA3EO15041 775 aa22.15■■□□□ 1.14
COMMD6-202ENST00000377612 TNNI2P48788 182 aa22.15■■□□□ 1.14
COMMD6-202ENST00000377612 ANKRD13AQ8IZ07 590 aa22.15■■□□□ 1.14
COMMD6-202ENST00000377612 ZNF296Q8WUU4 475 aaPredicted RBP22.15■■□□□ 1.14
COMMD6-202ENST00000377612 ELP3Q9H9T3 547 aa22.15■■□□□ 1.14
COMMD6-202ENST00000377612 DENND2AQ9ULE3 1009 aa22.15■■□□□ 1.14
COMMD6-202ENST00000377612 UNCXA6NJT0 531 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms