RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 CTSWP56202 376 aa12.89□□□□□ -0.35
HDAC6-203ENST00000376619 SIK1P57059 783 aa12.89□□□□□ -0.35
HDAC6-203ENST00000376619 DDX19AQ9NUU7 478 aaKnown RBP12.89□□□□□ -0.35
HDAC6-203ENST00000376619 DENND2AQ9ULE3 1009 aa12.89□□□□□ -0.35
HDAC6-203ENST00000376619 TNS3Q68CZ2 1445 aa12.89□□□□□ -0.35
HDAC6-203ENST00000376619 SPDYE4A6NLX3 237 aa12.88□□□□□ -0.35
HDAC6-203ENST00000376619 CRKLP46109 303 aaKnown RBP12.88□□□□□ -0.35
HDAC6-203ENST00000376619 TTF1Q15361 905 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-203ENST00000376619 RTN1Q16799 776 aa12.88□□□□□ -0.35
HDAC6-203ENST00000376619 CABP5Q9NP86 173 aa12.88□□□□□ -0.35
HDAC6-203ENST00000376619 ZNF444Q8N0Y2 327 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-203ENST00000376619 CCDC87Q9NVE4 849 aa12.88□□□□□ -0.35
HDAC6-203ENST00000376619 ANKARQ7Z5J8 1434 aa12.88□□□□□ -0.35
HDAC6-203ENST00000376619 NCOA3Q9Y6Q9 1424 aa12.88□□□□□ -0.35
HDAC6-203ENST00000376619 FSD2A1L4K1 749 aa12.88□□□□□ -0.35
HDAC6-203ENST00000376619 RBM6P78332 1123 aaKnown RBP12.88□□□□□ -0.35
HDAC6-203ENST00000376619 FAM200AQ8TCP9 573 aa12.88□□□□□ -0.35
HDAC6-203ENST00000376619 HOOK1Q9UJC3 728 aaKnown RBP12.88□□□□□ -0.35
HDAC6-203ENST00000376619 ZKSCAN5Q9Y2L8 839 aa12.88□□□□□ -0.35
HDAC6-203ENST00000376619 TECPR2O15040 1411 aa12.88□□□□□ -0.35
HDAC6-203ENST00000376619 ZFYP08048 801 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-203ENST00000376619 IFIT1BQ5T764 474 aaKnown RBP12.88□□□□□ -0.35
HDAC6-203ENST00000376619 ZBTB38Q8NAP3 1195 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-203ENST00000376619 SPATA5Q8NB90 893 aa12.88□□□□□ -0.35
HDAC6-203ENST00000376619 ATG3Q9NT62 314 aa12.88□□□□□ -0.35
HDAC6-203ENST00000376619 ANO10Q9NW15 660 aa12.88□□□□□ -0.35
HDAC6-203ENST00000376619 PDE6AP16499 860 aa12.87□□□□□ -0.35
HDAC6-203ENST00000376619 NOLC1Q14978 699 aaKnown RBP eCLIP12.87□□□□□ -0.35
HDAC6-203ENST00000376619 GIGYF2Q6Y7W6 1299 aaKnown RBP12.87□□□□□ -0.35
HDAC6-203ENST00000376619 NLRP10Q86W26 655 aa12.87□□□□□ -0.35
HDAC6-203ENST00000376619 GTF3C6Q969F1 213 aa12.87□□□□□ -0.35
HDAC6-203ENST00000376619 CLIC6Q96NY7 704 aa12.87□□□□□ -0.35
HDAC6-203ENST00000376619 V9GY48 417 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-203ENST00000376619 MYOM1P52179 1685 aa12.87□□□□□ -0.35
HDAC6-203ENST00000376619 MAGEB6P1A0A0J9YX57 407 aa12.87□□□□□ -0.35
HDAC6-203ENST00000376619 MRPS27Q92552 414 aaKnown RBP12.87□□□□□ -0.35
HDAC6-203ENST00000376619 DHX58Q96C10 678 aa12.87□□□□□ -0.35
HDAC6-203ENST00000376619 CARD10Q9BWT7 1032 aa12.87□□□□□ -0.35
HDAC6-203ENST00000376619 NRBP1Q9UHY1 535 aa12.87□□□□□ -0.35
HDAC6-203ENST00000376619 CCNL1Q9UK58 526 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-203ENST00000376619 TPM3P06753 285 aa12.87□□□□□ -0.35
HDAC6-203ENST00000376619 UQCRFS1P1P0C7P4 283 aa12.87□□□□□ -0.35
HDAC6-203ENST00000376619 CATIPQ7Z7H3 387 aa12.87□□□□□ -0.35
HDAC6-203ENST00000376619 GJD4Q96KN9 370 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-203ENST00000376619 TNNT1P13805 278 aa12.86□□□□□ -0.35
HDAC6-203ENST00000376619 CBX1P83916 185 aa12.86□□□□□ -0.35
HDAC6-203ENST00000376619 CUL4AQ13619 759 aa12.86□□□□□ -0.35
HDAC6-203ENST00000376619 PUM3Q15397 648 aaKnown RBP12.86□□□□□ -0.35
HDAC6-203ENST00000376619 ZNF827Q17R98 1081 aa12.86□□□□□ -0.35
HDAC6-203ENST00000376619 SUSD4Q5VX71 490 aa12.86□□□□□ -0.35
HDAC6-203ENST00000376619 USPL1Q5W0Q7 1092 aa12.86□□□□□ -0.35
HDAC6-203ENST00000376619 DCCP43146 1447 aa12.86□□□□□ -0.35
HDAC6-203ENST00000376619 NAP1L1P55209 391 aaKnown RBP12.86□□□□□ -0.35
HDAC6-203ENST00000376619 ZNF445P59923 1031 aa12.86□□□□□ -0.35
HDAC6-203ENST00000376619 ZSCAN16Q9H4T2 348 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-203ENST00000376619 RTCBQ9Y3I0 505 aaKnown RBP12.86□□□□□ -0.35
HDAC6-203ENST00000376619 HEG1Q9ULI3 1381 aa12.86□□□□□ -0.35
HDAC6-203ENST00000376619 ZNF174Q15697 407 aa12.86□□□□□ -0.35
HDAC6-203ENST00000376619 TSR1Q2NL82 804 aaKnown RBP12.86□□□□□ -0.35
HDAC6-203ENST00000376619 TTLL11Q8NHH1 800 aa12.86□□□□□ -0.35
HDAC6-203ENST00000376619 CBX8Q9HC52 389 aa12.86□□□□□ -0.35
HDAC6-203ENST00000376619 HELLSQ9NRZ9 838 aa12.86□□□□□ -0.35
HDAC6-203ENST00000376619 AOX1Q06278 1338 aa12.86□□□□□ -0.35
HDAC6-203ENST00000376619 PDE8BO95263 885 aa12.85□□□□□ -0.35
HDAC6-203ENST00000376619 PDIA3P30101 505 aaKnown RBP12.85□□□□□ -0.35
HDAC6-203ENST00000376619 MCAMP43121 646 aa12.85□□□□□ -0.35
HDAC6-203ENST00000376619 DNA2P51530 1060 aa12.85□□□□□ -0.35
HDAC6-203ENST00000376619 DYNLL1P63167 89 aaKnown RBP12.85□□□□□ -0.35
HDAC6-203ENST00000376619 CCDC112Q8NEF3 446 aa12.85□□□□□ -0.35
HDAC6-203ENST00000376619 MNS1Q8NEH6 495 aa12.85□□□□□ -0.35
HDAC6-203ENST00000376619 USP17L12C9JPN9 530 aa12.85□□□□□ -0.35
HDAC6-203ENST00000376619 USP17L21D6R901 530 aa12.85□□□□□ -0.35
HDAC6-203ENST00000376619 VPS54Q9P1Q0 977 aa12.85□□□□□ -0.35
HDAC6-203ENST00000376619 ANGEL1Q9UNK9 670 aaKnown RBP12.85□□□□□ -0.35
HDAC6-203ENST00000376619 SFPQP23246 707 aaKnown RBP eCLIP12.85□□□□□ -0.35
HDAC6-203ENST00000376619 TOB2Q14106 344 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-203ENST00000376619 MSL1Q68DK7 614 aa12.85□□□□□ -0.35
HDAC6-203ENST00000376619 PIH1D3Q9NQM4 214 aaKnown RBP12.85□□□□□ -0.35
HDAC6-203ENST00000376619 MAP3K15Q6ZN16 1313 aa12.84□□□□□ -0.35
HDAC6-203ENST00000376619 TRIM37O94972 964 aa12.84□□□□□ -0.35
HDAC6-203ENST00000376619 TPTE2Q6XPS3 522 aa12.84□□□□□ -0.35
HDAC6-203ENST00000376619 STOX1Q6ZVD7 989 aa12.84□□□□□ -0.35
HDAC6-203ENST00000376619 IFNKQ9P0W0 207 aa12.84□□□□□ -0.35
HDAC6-203ENST00000376619 CLIC4Q9Y696 253 aa12.84□□□□□ -0.35
HDAC6-203ENST00000376619 BAZ2BQ9UIF8 2168 aaKnown RBP12.84□□□□□ -0.35
HDAC6-203ENST00000376619 MCM7P33993 719 aa12.84□□□□□ -0.35
HDAC6-203ENST00000376619 POTEAQ6S8J7 498 aa12.84□□□□□ -0.35
HDAC6-203ENST00000376619 HEATR3Q7Z4Q2 680 aa12.84□□□□□ -0.35
HDAC6-203ENST00000376619 ARHGEF28Q8N1W1 1705 aaKnown RBP12.84□□□□□ -0.35
HDAC6-203ENST00000376619 BTBD18B2RXH4 712 aa12.84□□□□□ -0.35
HDAC6-203ENST00000376619 H7C1W4 665 aa12.84□□□□□ -0.35
HDAC6-203ENST00000376619 CHRNDQ07001 517 aa12.84□□□□□ -0.35
HDAC6-203ENST00000376619 KRT27Q7Z3Y8 459 aa12.84□□□□□ -0.35
HDAC6-203ENST00000376619 LPIN2Q92539 896 aa12.84□□□□□ -0.35
HDAC6-203ENST00000376619 TPM1P09493 284 aa12.84□□□□□ -0.35
HDAC6-203ENST00000376619 SKILP12757 684 aa12.84□□□□□ -0.35
HDAC6-203ENST00000376619 KRT40Q6A162 431 aa12.84□□□□□ -0.35
HDAC6-203ENST00000376619 TRMT44Q8IYL2 757 aaKnown RBP12.84□□□□□ -0.35
HDAC6-203ENST00000376619 ESR2Q92731 530 aa12.84□□□□□ -0.35
HDAC6-203ENST00000376619 WTIPA6NIX2 430 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms