RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 TNFAIP1Q13829 316 aa12.47□□□□□ -0.41
MDC1-201ENST00000376406 MYCNP04198 464 aaPredicted RBP12.47□□□□□ -0.41
MDC1-201ENST00000376406 MARCKSP29966 332 aaPredicted RBP12.47□□□□□ -0.41
MDC1-201ENST00000376406 ARHGEF6Q15052 776 aa12.47□□□□□ -0.41
MDC1-201ENST00000376406 FAM107BQ9H098 131 aa12.47□□□□□ -0.41
MDC1-201ENST00000376406 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.47□□□□□ -0.416e-7■□□□□ 10.4
MDC1-201ENST00000376406 ERVK-7P63135 1459 aa12.47□□□□□ -0.41
MDC1-201ENST00000376406 ZC3H13Q5T200 1668 aaKnown RBP12.47□□□□□ -0.41
MDC1-201ENST00000376406 FAM135BQ49AJ0 1406 aa12.47□□□□□ -0.41
MDC1-201ENST00000376406 SYT1P21579 422 aa12.47□□□□□ -0.41
MDC1-201ENST00000376406 G2E3Q7L622 706 aa12.47□□□□□ -0.41
MDC1-201ENST00000376406 SYCP3Q8IZU3 236 aa12.47□□□□□ -0.41
MDC1-201ENST00000376406 LLPHQ9BRT6 129 aaKnown RBP12.47□□□□□ -0.41
MDC1-201ENST00000376406 METTL22Q9BUU2 404 aaPredicted RBP12.47□□□□□ -0.41
MDC1-201ENST00000376406 TAOK3Q9H2K8 898 aa12.47□□□□□ -0.41
MDC1-201ENST00000376406 PNMA2Q9UL42 364 aa12.47□□□□□ -0.41
MDC1-201ENST00000376406 ERBB4Q15303 1308 aa12.47□□□□□ -0.41
MDC1-201ENST00000376406 IFFO1Q0D2I5 559 aa12.47□□□□□ -0.41
MDC1-201ENST00000376406 FMNL3Q8IVF7 1028 aa12.47□□□□□ -0.41
MDC1-201ENST00000376406 MAGEB6Q8N7X4 407 aa12.47□□□□□ -0.41
MDC1-201ENST00000376406 SRRTQ9BXP5 876 aaKnown RBP12.47□□□□□ -0.41
MDC1-201ENST00000376406 CDC42BPBQ9Y5S2 1711 aa12.47□□□□□ -0.41
MDC1-201ENST00000376406 CTR9Q6PD62 1173 aa12.47□□□□□ -0.41
MDC1-201ENST00000376406 CCDC174Q6PII3 467 aa12.47□□□□□ -0.41
MDC1-201ENST00000376406 MICALCLQ6ZW33 695 aa12.47□□□□□ -0.41
MDC1-201ENST00000376406 NIM1KQ8IY84 436 aa12.47□□□□□ -0.41
MDC1-201ENST00000376406 THRAP3Q9Y2W1 955 aaKnown RBP12.47□□□□□ -0.41
MDC1-201ENST00000376406 CEP152O94986 1710 aa12.47□□□□□ -0.41
MDC1-201ENST00000376406 RRP36Q96EU6 259 aaKnown RBP12.47□□□□□ -0.41
MDC1-201ENST00000376406 GOPCQ9HD26 462 aa12.47□□□□□ -0.41
MDC1-201ENST00000376406 SLC27A2O14975 620 aa12.46□□□□□ -0.41
MDC1-201ENST00000376406 JADE2Q9NQC1 790 aa12.46□□□□□ -0.41
MDC1-201ENST00000376406 MROH5Q6ZUA9 1318 aa12.46□□□□□ -0.41
MDC1-201ENST00000376406 H7C1D1 291 aa12.46□□□□□ -0.41
MDC1-201ENST00000376406 CYLC1P35663 651 aaPredicted RBP12.46□□□□□ -0.41
MDC1-201ENST00000376406 PRDM10Q9NQV6 1147 aa12.46□□□□□ -0.41
MDC1-201ENST00000376406 TRPM1Q7Z4N2 1603 aa12.46□□□□□ -0.41
MDC1-201ENST00000376406 TBCAO75347 108 aaKnown RBP12.46□□□□□ -0.41
MDC1-201ENST00000376406 HEATR3Q7Z4Q2 680 aa12.46□□□□□ -0.41
MDC1-201ENST00000376406 POLR3GO15318 223 aaPredicted RBP12.46□□□□□ -0.41
MDC1-201ENST00000376406 DYDC1Q8WWB3 177 aa12.46□□□□□ -0.41
MDC1-201ENST00000376406 AK9Q5TCS8 1911 aa12.46□□□□□ -0.42
MDC1-201ENST00000376406 DKC1O60832 514 aaKnown RBP eCLIP12.46□□□□□ -0.42
MDC1-201ENST00000376406 TMC4Q7Z404 712 aa12.46□□□□□ -0.42
MDC1-201ENST00000376406 RXRBP28702 533 aa12.46□□□□□ -0.42
MDC1-201ENST00000376406 SLC4A8Q2Y0W8 1093 aa12.46□□□□□ -0.42
MDC1-201ENST00000376406 MBD5Q9P267 1494 aa12.45□□□□□ -0.42
MDC1-201ENST00000376406 IDEP14735 1019 aa12.45□□□□□ -0.42
MDC1-201ENST00000376406 CALRP27797 417 aaKnown RBP12.45□□□□□ -0.42
MDC1-201ENST00000376406 TRIM75PA6NK02 468 aa12.45□□□□□ -0.42
MDC1-201ENST00000376406 TNNI3KQ59H18 835 aa12.45□□□□□ -0.42
MDC1-201ENST00000376406 DPP8Q6V1X1 898 aaPredicted RBP12.45□□□□□ -0.42
MDC1-201ENST00000376406 FPGT-TNNI3KV9GXZ4 949 aa12.45□□□□□ -0.42
MDC1-201ENST00000376406 CHMP4BP1P59074 171 aa12.45□□□□□ -0.42
MDC1-201ENST00000376406 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.45□□□□□ -0.42
MDC1-201ENST00000376406 SLC5A4Q9NY91 659 aa12.45□□□□□ -0.42
MDC1-201ENST00000376406 SNX14Q9Y5W7 946 aa12.45□□□□□ -0.42
MDC1-201ENST00000376406 ABCC4O15439 1325 aa12.45□□□□□ -0.42
MDC1-201ENST00000376406 TUBB4BP68371 445 aa12.45□□□□□ -0.42
MDC1-201ENST00000376406 CCDC91Q7Z6B0 441 aa12.45□□□□□ -0.42
MDC1-201ENST00000376406 ELP1O95163 1332 aa12.45□□□□□ -0.42
MDC1-201ENST00000376406 MAP2K1Q02750 393 aaPredicted RBP12.45□□□□□ -0.42
MDC1-201ENST00000376406 CEP112Q8N8E3 955 aa12.45□□□□□ -0.42
MDC1-201ENST00000376406 SSH2Q76I76 1423 aa12.45□□□□□ -0.42
MDC1-201ENST00000376406 USP19O94966 1318 aa12.45□□□□□ -0.42
MDC1-201ENST00000376406 EZRP15311 586 aaKnown RBP12.45□□□□□ -0.42
MDC1-201ENST00000376406 VTI1AQ96AJ9 217 aa12.45□□□□□ -0.42
MDC1-201ENST00000376406 ORAI2Q96SN7 254 aa12.45□□□□□ -0.42
MDC1-201ENST00000376406 PSMA7O14818 248 aa12.44□□□□□ -0.42
MDC1-201ENST00000376406 CCDC175P0C221 793 aa12.44□□□□□ -0.42
MDC1-201ENST00000376406 TCIRG1Q13488 830 aa12.44□□□□□ -0.42
MDC1-201ENST00000376406 CHST3Q7LGC8 479 aa12.44□□□□□ -0.42
MDC1-201ENST00000376406 ABCA9Q8IUA7 1624 aa12.44□□□□□ -0.42
MDC1-201ENST00000376406 CTAGE9A4FU28 777 aa12.44□□□□□ -0.42
MDC1-201ENST00000376406 SMARCC2Q8TAQ2 1214 aa12.44□□□□□ -0.42
MDC1-201ENST00000376406 CARD10Q9BWT7 1032 aa12.44□□□□□ -0.42
MDC1-201ENST00000376406 FBXO3Q9UK99 471 aa12.44□□□□□ -0.42
MDC1-201ENST00000376406 CLTCQ00610 1675 aaKnown RBP12.44□□□□□ -0.42
MDC1-201ENST00000376406 BICDL2A1A5D9 508 aa12.44□□□□□ -0.42
MDC1-201ENST00000376406 TCERG1LQ5VWI1 586 aa12.44□□□□□ -0.42
MDC1-201ENST00000376406 KRT222Q8N1A0 295 aa12.44□□□□□ -0.42
MDC1-201ENST00000376406 TBC1D5Q92609 795 aa12.44□□□□□ -0.42
MDC1-201ENST00000376406 TTC12Q9H892 705 aaPredicted RBP12.43□□□□□ -0.42
MDC1-201ENST00000376406 NAPAP54920 295 aa12.43□□□□□ -0.42
MDC1-201ENST00000376406 OTUD7AQ8TE49 926 aaPredicted RBP12.43□□□□□ -0.42
MDC1-201ENST00000376406 CNKSR1Q969H4 720 aa12.43□□□□□ -0.42
MDC1-201ENST00000376406 DHX58Q96C10 678 aa12.43□□□□□ -0.42
MDC1-201ENST00000376406 TMCO5BA8MYB1 307 aa12.43□□□□□ -0.42
MDC1-201ENST00000376406 HIBADHP31937 336 aaKnown RBP12.43□□□□□ -0.42
MDC1-201ENST00000376406 DNA2P51530 1060 aa12.43□□□□□ -0.42
MDC1-201ENST00000376406 LARGE2Q8N3Y3 721 aa12.43□□□□□ -0.42
MDC1-201ENST00000376406 UFL1O94874 794 aa12.43□□□□□ -0.42
MDC1-201ENST00000376406 PLS1Q14651 629 aa12.43□□□□□ -0.42
MDC1-201ENST00000376406 MCM9Q9NXL9 1143 aa12.43□□□□□ -0.42
MDC1-201ENST00000376406 SGSM2O43147 1006 aa12.43□□□□□ -0.42
MDC1-201ENST00000376406 CCDC113Q9H0I3 377 aa12.43□□□□□ -0.42
MDC1-201ENST00000376406 HSF2BPO75031 334 aa12.42□□□□□ -0.42
MDC1-201ENST00000376406 NLGN1Q8N2Q7 840 aa12.42□□□□□ -0.42
MDC1-201ENST00000376406 PLVAPQ9BX97 442 aa12.42□□□□□ -0.42
MDC1-201ENST00000376406 DNAI1Q9UI46 699 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms