RNA–Protein interactions for RNA: ENST00000376324.7

CHRDL2-202, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,665 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-202ENST00000376324 UPF2Q9HAU5 1272 aaKnown RBP17.79■□□□□ 0.44
CHRDL2-202ENST00000376324 TSHZ2Q9NRE2 1034 aa17.79■□□□□ 0.44
CHRDL2-202ENST00000376324 HELLSQ9NRZ9 838 aa17.79■□□□□ 0.44
CHRDL2-202ENST00000376324 MAST3O60307 1309 aa17.78■□□□□ 0.44
CHRDL2-202ENST00000376324 USP17L3A6NCW0 530 aa17.78■□□□□ 0.44
CHRDL2-202ENST00000376324 USP17L4A6NCW7 530 aa17.78■□□□□ 0.44
CHRDL2-202ENST00000376324 RAD17O75943 681 aa17.78■□□□□ 0.44
CHRDL2-202ENST00000376324 REC8O95072 547 aa17.78■□□□□ 0.44
CHRDL2-202ENST00000376324 KIAA1211Q6ZU35 1233 aa17.78■□□□□ 0.44
CHRDL2-202ENST00000376324 USP17L1Q7RTZ2 530 aa17.78■□□□□ 0.44
CHRDL2-202ENST00000376324 TICAM2Q86XR7 235 aa17.78■□□□□ 0.44
CHRDL2-202ENST00000376324 CERS5Q8N5B7 392 aa17.78■□□□□ 0.44
CHRDL2-202ENST00000376324 JDP2Q8WYK2 163 aa17.78■□□□□ 0.44
CHRDL2-202ENST00000376324 NSUN4Q96CB9 384 aaKnown RBP17.78■□□□□ 0.44
CHRDL2-202ENST00000376324 RAD50Q92878 1312 aa17.78■□□□□ 0.44
CHRDL2-202ENST00000376324 LTBP3Q9NS15 1303 aa17.78■□□□□ 0.44
CHRDL2-202ENST00000376324 PRELPP51888 382 aa17.77■□□□□ 0.44
CHRDL2-202ENST00000376324 STRIP1Q5VSL9 837 aa17.77■□□□□ 0.44
CHRDL2-202ENST00000376324 MIGA1Q8NAN2 632 aa17.77■□□□□ 0.44
CHRDL2-202ENST00000376324 ZNF384Q8TF68 577 aa17.77■□□□□ 0.44
CHRDL2-202ENST00000376324 ZNRF3Q9ULT6 936 aa17.77■□□□□ 0.44
CHRDL2-202ENST00000376324 GPR162Q16538 588 aa17.77■□□□□ 0.43
CHRDL2-202ENST00000376324 ADGRA1Q86SQ6 560 aa17.77■□□□□ 0.43
CHRDL2-202ENST00000376324 CCDC171Q6TFL3 1326 aa17.76■□□□□ 0.43
CHRDL2-202ENST00000376324 EIF5BO60841 1220 aaKnown RBP17.76■□□□□ 0.43
CHRDL2-202ENST00000376324 DIXDC1Q155Q3 683 aa17.76■□□□□ 0.43
CHRDL2-202ENST00000376324 DACT2Q5SW24 774 aa17.76■□□□□ 0.43
CHRDL2-202ENST00000376324 MAST2Q6P0Q8 1798 aa17.75■□□□□ 0.43
CHRDL2-202ENST00000376324 PTH1RQ03431 593 aa17.75■□□□□ 0.43
CHRDL2-202ENST00000376324 AIDAQ96BJ3 306 aa17.75■□□□□ 0.43
CHRDL2-202ENST00000376324 MYH2Q9UKX2 1941 aa17.75■□□□□ 0.43
CHRDL2-202ENST00000376324 PSMD14O00487 310 aa17.74■□□□□ 0.43
CHRDL2-202ENST00000376324 GPAA1O43292 621 aa17.74■□□□□ 0.43
CHRDL2-202ENST00000376324 MBD4O95243 580 aa17.74■□□□□ 0.43
CHRDL2-202ENST00000376324 KIAA0825Q8IV33 1275 aa17.74■□□□□ 0.43
CHRDL2-202ENST00000376324 USP26Q9BXU7 913 aa17.74■□□□□ 0.43
CHRDL2-202ENST00000376324 LSG1Q9H089 658 aaKnown RBP17.74■□□□□ 0.43
CHRDL2-202ENST00000376324 ARMT1Q9H993 441 aa17.74■□□□□ 0.43
CHRDL2-202ENST00000376324 TTF2Q9UNY4 1162 aaKnown RBP17.74■□□□□ 0.43
CHRDL2-202ENST00000376324 SCNN1DP51172 638 aa17.74■□□□□ 0.43
CHRDL2-202ENST00000376324 DYNLL1P63167 89 aaKnown RBP17.74■□□□□ 0.43
CHRDL2-202ENST00000376324 GSTO1P78417 241 aa17.74■□□□□ 0.43
CHRDL2-202ENST00000376324 VPS53Q5VIR6 699 aa17.74■□□□□ 0.43
CHRDL2-202ENST00000376324 C22orf23Q9BZE7 217 aa17.74■□□□□ 0.43
CHRDL2-202ENST00000376324 ZNF646O15015 1829 aaPredicted RBP17.74■□□□□ 0.43
CHRDL2-202ENST00000376324 PSME4Q14997 1843 aa17.73■□□□□ 0.43
CHRDL2-202ENST00000376324 MAGEB6P1A0A0J9YX57 407 aa17.73■□□□□ 0.43
CHRDL2-202ENST00000376324 CXCL9Q07325 125 aa17.73■□□□□ 0.43
CHRDL2-202ENST00000376324 LCORLQ8N3X6 602 aa17.73■□□□□ 0.43
CHRDL2-202ENST00000376324 LMNB1P20700 586 aa17.72■□□□□ 0.43
CHRDL2-202ENST00000376324 AATFQ9NY61 560 aaKnown RBP eCLIP17.72■□□□□ 0.43
CHRDL2-202ENST00000376324 SUGT1Q9Y2Z0 365 aa17.72■□□□□ 0.43
CHRDL2-202ENST00000376324 ZBTB12Q9Y330 459 aaPredicted RBP17.72■□□□□ 0.43
CHRDL2-202ENST00000376324 SBF1O95248 1867 aa17.72■□□□□ 0.43
CHRDL2-202ENST00000376324 LDHCP07864 332 aa17.71■□□□□ 0.43
CHRDL2-202ENST00000376324 FKBP1AP62942 108 aaKnown RBP17.71■□□□□ 0.43
CHRDL2-202ENST00000376324 CIAPIN1Q6FI81 312 aa17.71■□□□□ 0.43
CHRDL2-202ENST00000376324 RSBN1LQ6PCB5 846 aaPredicted RBP17.71■□□□□ 0.43
CHRDL2-202ENST00000376324 STRBPQ96SI9 672 aaKnown RBP17.71■□□□□ 0.43
CHRDL2-202ENST00000376324 APPP05067 770 aa17.71■□□□□ 0.42
CHRDL2-202ENST00000376324 VIL1P09327 827 aaKnown RBP17.71■□□□□ 0.42
CHRDL2-202ENST00000376324 EIF6P56537 245 aaKnown RBP17.71■□□□□ 0.42
CHRDL2-202ENST00000376324 SLF2Q8IX21 1173 aa17.71■□□□□ 0.42
CHRDL2-202ENST00000376324 NOL10Q9BSC4 688 aaKnown RBP17.71■□□□□ 0.42
CHRDL2-202ENST00000376324 UTRNP46939 3433 aa17.7■□□□□ 0.42
CHRDL2-202ENST00000376324 MROH7-TTC4A0A0A0MT08 1334 aa17.7■□□□□ 0.42
CHRDL2-202ENST00000376324 PRKAB2O43741 272 aa17.7■□□□□ 0.42
CHRDL2-202ENST00000376324 HSPD1P10809 573 aaKnown RBP17.7■□□□□ 0.42
CHRDL2-202ENST00000376324 TBC1D32Q96NH3 1257 aa17.7■□□□□ 0.42
CHRDL2-202ENST00000376324 RNF181Q9P0P0 153 aa17.7■□□□□ 0.42
CHRDL2-202ENST00000376324 RBM8AQ9Y5S9 174 aaKnown RBP17.7■□□□□ 0.42
CHRDL2-202ENST00000376324 GJA3Q9Y6H8 435 aa17.7■□□□□ 0.42
CHRDL2-202ENST00000376324 ADAMTSL1Q8N6G6 1762 aa17.69■□□□□ 0.42
CHRDL2-202ENST00000376324 DICER1Q9UPY3 1922 aaKnown RBP17.69■□□□□ 0.42
CHRDL2-202ENST00000376324 BTDP43251 543 aa17.69■□□□□ 0.42
CHRDL2-202ENST00000376324 RBM5P52756 815 aaKnown RBP eCLIP17.69■□□□□ 0.42
CHRDL2-202ENST00000376324 TNIP1Q15025 636 aa17.69■□□□□ 0.42
CHRDL2-202ENST00000376324 MAP4K1Q92918 833 aa17.69■□□□□ 0.42
CHRDL2-202ENST00000376324 RIOK1Q9BRS2 568 aaKnown RBP17.69■□□□□ 0.42
CHRDL2-202ENST00000376324 SLC4A4Q9Y6R1 1079 aa17.69■□□□□ 0.42
CHRDL2-202ENST00000376324 FZD9O00144 591 aa17.68■□□□□ 0.42
CHRDL2-202ENST00000376324 IGSF3O75054 1194 aa17.68■□□□□ 0.42
CHRDL2-202ENST00000376324 MCCP23508 829 aa17.68■□□□□ 0.42
CHRDL2-202ENST00000376324 TEKT1Q969V4 418 aa17.68■□□□□ 0.42
CHRDL2-202ENST00000376324 DSCC1Q9BVC3 393 aa17.68■□□□□ 0.42
CHRDL2-202ENST00000376324 DAGLAQ9Y4D2 1042 aa17.68■□□□□ 0.42
CHRDL2-202ENST00000376324 BAG3O95817 575 aa17.67■□□□□ 0.42
CHRDL2-202ENST00000376324 CRKP46108 304 aa17.67■□□□□ 0.42
CHRDL2-202ENST00000376324 TMED8Q6PL24 325 aaPredicted RBP17.67■□□□□ 0.42
CHRDL2-202ENST00000376324 SH3RF3Q8TEJ3 882 aaPredicted RBP17.67■□□□□ 0.42
CHRDL2-202ENST00000376324 PCDHAC2Q9Y5I4 1007 aa17.67■□□□□ 0.42
CHRDL2-202ENST00000376324 MYO3BQ8WXR4 1341 aa17.67■□□□□ 0.42
CHRDL2-202ENST00000376324 ZNF541Q9H0D2 1346 aa17.67■□□□□ 0.42
CHRDL2-202ENST00000376324 FOXP2O15409 715 aa17.67■□□□□ 0.42
CHRDL2-202ENST00000376324 C9orf131Q5VYM1 1079 aa17.67■□□□□ 0.42
CHRDL2-202ENST00000376324 SDR42E1Q8WUS8 393 aa17.67■□□□□ 0.42
CHRDL2-202ENST00000376324 RBM19Q9Y4C8 960 aaKnown RBP17.67■□□□□ 0.42
CHRDL2-202ENST00000376324 U3KPZ7 1027 aaPredicted RBP17.67■□□□□ 0.42
CHRDL2-202ENST00000376324 GAKO14976 1311 aa17.67■□□□□ 0.42
CHRDL2-202ENST00000376324 GPR75-ASB3A0A0A6YYF3 556 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms